RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Kcnh8P59111 1102 aa13.48□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 Rad21Q61550 635 aaKnown RBP13.48□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 Liat1Q810M6 228 aa13.48□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 TnikP83510 1323 aa13.47□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 Hfm1D3Z4R1 1434 aa13.47□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 Prrc2bQ7TPM1 1486 aaKnown RBP13.47□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 Kiaa1107Q80TK0 1369 aa13.46□□□□□ -0.25
Cpsf3-211ENSMUST00000222968 Stag3O70576 1240 aa13.45□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 CrbnQ8C7D2 445 aa13.45□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 Arhgap23Q69ZH9 1483 aa13.44□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 Prkrip1Q9CWV6 186 aaKnown RBP13.44□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 Scaf11E9PZM7 1456 aaKnown RBP13.43□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 IqubQ8CDK3 788 aa13.43□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 Kif13aQ9EQW7 1749 aa13.43□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 Itsn1Q9Z0R4 1714 aa13.43□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 Nrxn1Q9CS84 1514 aa13.43□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 CenpjQ569L8 1344 aa13.43□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 Adgrl1Q80TR1 1466 aa13.42□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 Pcdh10E9PXQ7 1057 aa13.42□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 Plekhh1Q80TI1 1356 aa13.41□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 Cnga1P29974 684 aa13.41□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 CltcQ68FD5 1675 aaKnown RBP13.41□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 IbtkQ6ZPR6 1352 aaKnown RBP13.41□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 Tcerg1Q8CGF7 1100 aaKnown RBP13.4□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 Nlrp6Q91WS2 869 aa13.4□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 Arhgef28P97433 1693 aa13.4□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 Uspl1Q3ULM6 1089 aa13.4□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 Rsph4aQ8BYM7 716 aa13.4□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 P2rx7Q9Z1M0 595 aa13.4□□□□□ -0.26
Cpsf3-211ENSMUST00000222968 Slc4a3P16283 1227 aa13.39□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Cep170bQ80U49 1574 aa13.39□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Naip7Q9JIB3 1402 aa13.39□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 RictorQ6QI06 1708 aa13.38□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Med14A2ABV5 1459 aaKnown RBP13.38□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Cald1E9QA15 768 aaKnown RBP13.38□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Map4k4P97820 1233 aaKnown RBP13.38□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Mbd3Q9Z2D8 285 aaKnown RBP13.38□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Iqsec2Q5DU25 1478 aa13.37□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Ccdc30Q8BVF4 654 aa13.37□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Golga2Q921M4 999 aa13.37□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Speer4f1Q9D5Q6 258 aa13.37□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 NpatQ8BMA5 1420 aa13.37□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Afap1Q80YS6 731 aa13.36□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Egfem1Q8C088 590 aa13.36□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Pak3Q61036 559 aa13.36□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Shq1Q7TMX5 569 aa13.36□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 NktrP30415 1453 aa13.35□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Abca14E9Q8F8 1683 aa13.35□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Ralbp1Q62172 648 aa13.35□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Zc3h13E9Q784 1729 aaKnown RBP13.34□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Plekhg1F6S200 1446 aa13.34□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 NeflP08551 543 aa13.34□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Stk26Q99JT2 416 aa13.34□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Rwdd1Q9CQK7 243 aa13.34□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 PplQ9R269 1755 aa13.34□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 Rtl5Q5DTT4 599 aa13.33□□□□□ -0.27
Cpsf3-211ENSMUST00000222968 GsdmaQ9EST1 446 aa13.33□□□□□ -0.28
Cpsf3-211ENSMUST00000222968 Ercc6l2Q9JIM3 1537 aa13.31□□□□□ -0.28
Cpsf3-211ENSMUST00000222968 Kdm2bQ6P1G2 1309 aa13.31□□□□□ -0.28
Cpsf3-211ENSMUST00000222968 Prdm10Q3UTQ7 1184 aa13.31□□□□□ -0.28
Cpsf3-211ENSMUST00000222968 Zmym3Q9JLM4 1370 aa13.3□□□□□ -0.28
Cpsf3-211ENSMUST00000222968 Ncbp3Q8BZR9 615 aaKnown RBP13.3□□□□□ -0.28
Cpsf3-211ENSMUST00000222968 Exosc9Q9JHI7 438 aaKnown RBP13.3□□□□□ -0.28
Cpsf3-211ENSMUST00000222968 Nwd1A6H603 1563 aa13.29□□□□□ -0.28
Cpsf3-211ENSMUST00000222968 Neurod2Q62414 383 aa13.29□□□□□ -0.28
Cpsf3-211ENSMUST00000222968 Zranb1Q7M760 708 aa13.29□□□□□ -0.28
Cpsf3-211ENSMUST00000222968 Q9D9H8 365 aa13.29□□□□□ -0.28
Cpsf3-211ENSMUST00000222968 Dip2aQ8BWT5 1523 aa13.29□□□□□ -0.28
Cpsf3-211ENSMUST00000222968 Gsto1O09131 240 aa13.28□□□□□ -0.28
Cpsf3-211ENSMUST00000222968 Atp1b4Q99ME6 356 aa13.27□□□□□ -0.28
Cpsf3-211ENSMUST00000222968 Gas2l2Q5SSG4 860 aa13.27□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 Utp14aQ640M1 767 aaKnown RBP13.27□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 Atp2b2Q9R0K7 1198 aa13.27□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 Cdk19Q8BWD8 501 aa13.26□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 Dnajc5gQ8C632 165 aa13.25□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 Znf541Q0GGX2 1363 aa13.25□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 Znf521Q6KAS7 1311 aa13.24□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 NinlQ6ZQ12 1394 aa13.24□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 Chd2E9PZM4 1827 aaKnown RBP13.24□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 FanciQ8K368 1330 aa13.24□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 Gemin5Q8BX17 1502 aaKnown RBP13.24□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 Adamtsl3G3UXC7 1706 aa13.23□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 Ttll13A4Q9F6 804 aa13.23□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 Tsen2Q6P7W5 460 aa13.23□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 Atxn3Q9CVD2 355 aa13.23□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 Usp32F8VPZ3 1604 aa13.22□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 Apaf1O88879 1249 aa13.21□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 U2af1Q9D883 239 aaKnown RBP13.21□□□□□ -0.29
Cpsf3-211ENSMUST00000222968 Apbb1Q9QXJ1 710 aa13.21□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Map3k19E9Q3S4 1311 aa13.2□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Asxl2Q8BZ32 1370 aa13.2□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Trim28Q62318 834 aa13.19□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Smc5Q8CG46 1101 aaKnown RBP13.19□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Ipo9Q91YE6 1041 aa13.19□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Uhrf1bp1B2KF50 1429 aa13.19□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Fam135bQ9DAI6 1403 aa13.19□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Cps1Q8C196 1500 aa13.19□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 IghaA0A0A6YXW6 389 aa13.18□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Slit3Q9WVB4 1523 aa13.18□□□□□ -0.3
Cpsf3-211ENSMUST00000222968 Trim58Q5NCC9 485 aa13.17□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 16.4 ms