RNA–Protein interactions for RNA: ENSMUST00000211140.1

Ptpre-207, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ptpre, Length 5,753 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-207ENSMUST00000211140 Sv2bQ8BG39 683 aa20.67■□□□□ 0.9
Ptpre-207ENSMUST00000211140 Phldb1Q6PDH0 1371 aaKnown RBP20.67■□□□□ 0.9
Ptpre-207ENSMUST00000211140 Q7TT23 1179 aa20.67■□□□□ 0.9
Ptpre-207ENSMUST00000211140 Gsto1O09131 240 aa20.66■□□□□ 0.9
Ptpre-207ENSMUST00000211140 1700010I14RikQ7TPG0 532 aa20.66■□□□□ 0.9
Ptpre-207ENSMUST00000211140 Slc4a2P13808 1237 aaKnown RBP20.66■□□□□ 0.9
Ptpre-207ENSMUST00000211140 Mcm2P97310 904 aa20.66■□□□□ 0.9
Ptpre-207ENSMUST00000211140 Stk11ipQ3TAA7 1072 aa20.65■□□□□ 0.9
Ptpre-207ENSMUST00000211140 Fam13bQ8K2H3 851 aa20.65■□□□□ 0.9
Ptpre-207ENSMUST00000211140 Stk3Q9JI10 497 aa20.65■□□□□ 0.9
Ptpre-207ENSMUST00000211140 Psma5Q9Z2U1 241 aaKnown RBP20.65■□□□□ 0.9
Ptpre-207ENSMUST00000211140 Vps8Q0P5W1 1427 aa20.64■□□□□ 0.9
Ptpre-207ENSMUST00000211140 Gsdma3Q5Y4Y6 464 aa20.64■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Zfp444Q3TDV8 331 aaKnown RBP20.64■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Ncoa2Q61026 1462 aa20.64■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Ccdc171E9Q1U1 1324 aa20.64■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Nsd2Q8BVE8 1365 aa20.63■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Me1P06801 572 aa20.63■□□□□ 0.89
Ptpre-207ENSMUST00000211140 March6Q6ZQ89 909 aa20.63■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Dusp9Q7TNL7 452 aa20.62■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Dhx29Q6PGC1 1365 aaKnown RBP20.62■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Zkscan2G3X952 960 aa20.62■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Cdkn1cP49919 348 aa20.62■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Mns1Q61884 491 aa20.62■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Ppp2r1aQ76MZ3 589 aa20.61■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Rrp9Q91WM3 475 aaKnown RBP20.61■□□□□ 0.89
Ptpre-207ENSMUST00000211140 PdcQ9QW08 244 aa20.61■□□□□ 0.89
Ptpre-207ENSMUST00000211140 AnlnQ8K298 1121 aaKnown RBP20.61■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Rbm10Q99KG3 930 aaKnown RBP20.61■□□□□ 0.89
Ptpre-207ENSMUST00000211140 NexnQ7TPW1 607 aa20.6■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Trim29Q8R2Q0 587 aa20.6■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Ttll5Q8CHB8 1328 aa20.6■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Gtf2f1Q3THK3 508 aaKnown RBP20.6■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Necab1Q8BG18 352 aa20.6■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Puf60Q3UEB3 564 aaKnown RBP20.59■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Fyb1O35601 819 aa20.59■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Mphosph10Q810V0 681 aaKnown RBP20.59■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Zkscan1Q8BGS3 561 aaKnown RBP20.58■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Rab3gap2Q8BMG7 1366 aa20.58■□□□□ 0.89
Ptpre-207ENSMUST00000211140 Bcl2l13P59017 434 aa20.58■□□□□ 0.89
Ptpre-207ENSMUST00000211140 HmmrQ00547 794 aaKnown RBP20.57■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Cwc15Q9JHS9 229 aaKnown RBP20.57■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Zfp644E9QA22 1323 aa20.57■□□□□ 0.88
Ptpre-207ENSMUST00000211140 BcanQ61361 883 aa20.56■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Fmnl2A2APV2 1086 aa20.56■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Nap1l1P28656 391 aaKnown RBP20.55■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Cttnbp2B9EJA2 1648 aa20.55■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Kif3cO35066 796 aa20.55■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Babam1Q3UI43 333 aa20.55■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Ift140E9PY46 1464 aa20.54■□□□□ 0.88
Ptpre-207ENSMUST00000211140 FanciQ8K368 1330 aa20.54■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Cavin4A2AMM0 362 aa20.53■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Smarca4Q3TKT4 1613 aaKnown RBP20.53■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Ncbp3Q8BZR9 615 aaKnown RBP20.53■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Nop14Q8R3N1 860 aaKnown RBP20.53■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Olfml1Q8BSH2 233 aa20.53■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Phf14Q9D4H9 881 aa20.53■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Podxl2Q8CAE9 603 aa20.52■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Prm3Q62100 101 aa20.52■□□□□ 0.88
Ptpre-207ENSMUST00000211140 Sycp1Q62209 993 aa20.51■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Pde4cQ3UEI1 686 aa20.51■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Atp2b2Q9R0K7 1198 aa20.51■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Tmco3Q8BH01 678 aa20.51■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Apaf1O88879 1249 aa20.51■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Q9D9S1 216 aa20.51■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Atad2bE9Q166 1460 aaKnown RBP20.5■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Fez1Q8K0X8 392 aa20.5■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Chaf1aQ9QWF0 911 aa20.5■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Jph4Q80WT0 628 aa20.5■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Rsph6aQ8CDR2 708 aa20.5■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Cog6Q8R3I3 657 aa20.49■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Rbm28Q8CGC6 750 aaKnown RBP20.49■□□□□ 0.87
Ptpre-207ENSMUST00000211140 UvssaQ9D479 717 aa20.49■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Gcc1Q9D4H2 778 aa20.49■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Washc2Q6PGL7 1334 aa20.49■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Nphp1Q9QY53 687 aa20.49■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Smc2Q8CG48 1191 aaKnown RBP20.48■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Gnai2P08752 355 aaKnown RBP20.48■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Hdgfl1Q2VPR5 283 aa20.48■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Soga1E1U8D0 1418 aa20.48■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Kcnh8P59111 1102 aa20.48■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Stk38Q91VJ4 465 aa20.47■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Sptbn5F6UCX4 1208 aa20.47■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Dctn1O08788 1281 aa20.47■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Ssh1Q76I79 1042 aa20.47■□□□□ 0.87
Ptpre-207ENSMUST00000211140 NefhP19246 1090 aa20.46■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Fnbp4Q6ZQ03 1031 aa20.46■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Ppm1fQ8CGA0 452 aa20.46■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Odf2lQ9D478 642 aa20.46■□□□□ 0.87
Ptpre-207ENSMUST00000211140 TatQ8QZR1 454 aa20.46■□□□□ 0.87
Ptpre-207ENSMUST00000211140 Tmc1Q8R4P5 757 aa20.45■□□□□ 0.86
Ptpre-207ENSMUST00000211140 Q9D9H8 365 aa20.45■□□□□ 0.86
Ptpre-207ENSMUST00000211140 Abl1P00520 1123 aa20.45■□□□□ 0.86
Ptpre-207ENSMUST00000211140 TnmdQ9EP64 317 aa20.45■□□□□ 0.86
Ptpre-207ENSMUST00000211140 Kif18aQ91WD7 886 aa20.45■□□□□ 0.86
Ptpre-207ENSMUST00000211140 SelenooQ9DBC0 667 aa20.45■□□□□ 0.86
Ptpre-207ENSMUST00000211140 Cd109Q8R422 1442 aa20.44■□□□□ 0.86
Ptpre-207ENSMUST00000211140 Gtf2a1Q99PM3 378 aa20.44■□□□□ 0.86
Ptpre-207ENSMUST00000211140 Myom3A2ABU4 1439 aa20.44■□□□□ 0.86
Ptpre-207ENSMUST00000211140 Eva1cP58659 440 aa20.44■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 124.5 ms