RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 Robo1O89026 1612 aa13.15□□□□□ -0.3
Pdlim5-209ENSMUST00000196908 Efcab6Q6P1E8 1516 aa13.14□□□□□ -0.31
Pdlim5-209ENSMUST00000196908 Marf1Q8BJ34 1730 aaKnown RBP13.14□□□□□ -0.31
Pdlim5-209ENSMUST00000196908 Kif1bQ60575 1816 aaKnown RBP13.14□□□□□ -0.31
Pdlim5-209ENSMUST00000196908 C3P01027 1663 aa13.14□□□□□ -0.31
Pdlim5-209ENSMUST00000196908 Lhx8O35652 367 aa13.13□□□□□ -0.31
Pdlim5-209ENSMUST00000196908 AcrbpQ3V140 540 aa13.13□□□□□ -0.31
Pdlim5-209ENSMUST00000196908 Styxl1Q9DAR2 321 aa13.13□□□□□ -0.31
Pdlim5-209ENSMUST00000196908 Kiaa1522A2A7S8 1013 aa13.12□□□□□ -0.31
Pdlim5-209ENSMUST00000196908 Smim5Q8BT42 78 aa13.12□□□□□ -0.31
Pdlim5-209ENSMUST00000196908 Chic2Q9D9G3 165 aa13.12□□□□□ -0.31
Pdlim5-209ENSMUST00000196908 Ddx17Q501J6 650 aaKnown RBP13.11□□□□□ -0.31
Pdlim5-209ENSMUST00000196908 OscarQ8VBT3 265 aa13.11□□□□□ -0.31
Pdlim5-209ENSMUST00000196908 Erich6D3Z6S9 713 aa13.1□□□□□ -0.31
Pdlim5-209ENSMUST00000196908 Krtap4-1Q3UUY3 169 aa13.09□□□□□ -0.31
Pdlim5-209ENSMUST00000196908 PplQ9R269 1755 aa13.08□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Prm3Q62100 101 aa13.08□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Rapgefl1Q68EF8 662 aa13.08□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Ddx54Q8K4L0 874 aaKnown RBP13.08□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Abca8aQ8K442 1620 aa13.08□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Tex14Q7M6U3 1450 aa13.08□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 PtprgQ05909 1442 aa13.07□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 InhbeO08717 350 aa13.07□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Sugp2Q8CH09 1067 aa13.07□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Atp1b4Q99ME6 356 aa13.07□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Prrc2bQ7TPM1 1486 aaKnown RBP13.07□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 GnpatP98192 678 aa13.06□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Stk24Q99KH8 431 aa13.06□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Slit3Q9WVB4 1523 aa13.06□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Il16O54824 1322 aa13.06□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Uggt1Q6P5E4 1551 aa13.06□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Ino80Q6ZPV2 1559 aa13.05□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 AnkarA2RT91 1465 aa13.04□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Unc13bQ9Z1N9 1602 aa13.04□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Sf3b2Q3UJB0 878 aaKnown RBP13.04□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 HnrnpmQ9D0E1 729 aaKnown RBP13.04□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Arhgef28P97433 1693 aa13.03□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Arhgef1Q61210 920 aaKnown RBP13.03□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Sgsm1Q8BPQ7 1093 aa13.03□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Atp7aQ64430 1491 aa13.03□□□□□ -0.32
Pdlim5-209ENSMUST00000196908 Col14a1Q80X19 1797 aa13.02□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 VirmaA2AIV2 1811 aaKnown RBP13.02□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 Znf710Q3U288 666 aa13□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 Acsbg1Q99PU5 721 aa13□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 DccP70211 1447 aa12.99□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 Ubap1lG3UW59 384 aa12.99□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 Kcna3P16390 528 aa12.99□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 Psrc1Q9D0P7 329 aa12.99□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 Lrrc59Q922Q8 307 aaKnown RBP12.98□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 Q9D9H8 365 aa12.98□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 Tarbp1E9Q368 1579 aa12.98□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 Map4P27546 1125 aaKnown RBP12.97□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 Myom3A2ABU4 1439 aa12.96□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 Pik3r4Q8VD65 1358 aa12.96□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 NclP09405 707 aaKnown RBP12.96□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 Kiaa0319Q5SZV5 1081 aa12.96□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 Ppp1r37Q8BKR5 712 aa12.96□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 Farp2Q91VS8 1065 aa12.96□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 Clstn2Q9ER65 966 aa12.96□□□□□ -0.33
Pdlim5-209ENSMUST00000196908 Ppip5k1A2ARP1 1436 aa12.96□□□□□ -0.34
Pdlim5-209ENSMUST00000196908 Adamtsl1Q8BLI0 1745 aa12.95□□□□□ -0.34
Pdlim5-209ENSMUST00000196908 NalcnQ8BXR5 1738 aa12.95□□□□□ -0.34
Pdlim5-209ENSMUST00000196908 Tnks1bp1P58871 1720 aa12.94□□□□□ -0.34
Pdlim5-209ENSMUST00000196908 Nsd2Q8BVE8 1365 aa12.94□□□□□ -0.34
Pdlim5-209ENSMUST00000196908 Yy1Q00899 414 aa12.93□□□□□ -0.34
Pdlim5-209ENSMUST00000196908 Gm10563F6WIE4 79 aa12.92□□□□□ -0.34
Pdlim5-209ENSMUST00000196908 Kcna6Q61923 529 aa12.92□□□□□ -0.34
Pdlim5-209ENSMUST00000196908 Nup155Q99P88 1391 aaKnown RBP12.92□□□□□ -0.34
Pdlim5-209ENSMUST00000196908 Ttll5Q8CHB8 1328 aa12.91□□□□□ -0.34
Pdlim5-209ENSMUST00000196908 Prdm2A2A7B5 1709 aaKnown RBP12.91□□□□□ -0.34
Pdlim5-209ENSMUST00000196908 TMEM121BQ99MX7 572 aa12.91□□□□□ -0.34
Pdlim5-209ENSMUST00000196908 Rreb1Q3UH06 1700 aaKnown RBP12.91□□□□□ -0.34
Pdlim5-209ENSMUST00000196908 Shq1Q7TMX5 569 aa12.9□□□□□ -0.34
Pdlim5-209ENSMUST00000196908 Sra1Q80VJ2 232 aa12.9□□□□□ -0.34
Pdlim5-209ENSMUST00000196908 Fam135bQ9DAI6 1403 aa12.89□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 Mroh1E0CZ22 1640 aa12.89□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 Pik3c2bE9QAN8 1632 aa12.89□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 Iqgap3F8VQ29 1632 aa12.89□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 Rnf225Q9D7D1 332 aa12.89□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 N4bp2F8VQG7 1678 aaKnown RBP12.89□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 Sall3Q62255 1320 aa12.88□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 PsdQ5DTT2 1024 aa12.86□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 Cd109Q8R422 1442 aa12.86□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 Ppef1O35655 650 aa12.85□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 Magea1O89006 320 aa12.85□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 Magea5O89009 320 aa12.85□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 En2P09066 324 aa12.85□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 Magea2Q9R2A2 320 aa12.85□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 ErbinQ80TH2 1402 aa12.85□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 Tnrc6cQ3UHC0 1690 aaKnown RBP12.84□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 Sirt1Q923E4 737 aa12.84□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 Zfp644E9QA22 1323 aa12.84□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 Pik3c2gO70167 1506 aa12.83□□□□□ -0.35
Pdlim5-209ENSMUST00000196908 Sipa1l2Q80TE4 1722 aa12.83□□□□□ -0.36
Pdlim5-209ENSMUST00000196908 Ltbp1Q8CG19 1712 aa12.82□□□□□ -0.36
Pdlim5-209ENSMUST00000196908 Zcwpw1Q6IR42 630 aa12.82□□□□□ -0.36
Pdlim5-209ENSMUST00000196908 Dcbld2Q91ZV3 769 aa12.82□□□□□ -0.36
Pdlim5-209ENSMUST00000196908 Atp7bQ64446 1462 aa12.81□□□□□ -0.36
Pdlim5-209ENSMUST00000196908 AU022751B1B0V2 589 aa12.81□□□□□ -0.36
Pdlim5-209ENSMUST00000196908 Ezh2Q61188 746 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 51.3 ms