RNA–Protein interactions for RNA: ENSMUST00000192503.1

Pcdha3-201, Transcript of Protocadherin alpha 3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdha3, Length 5,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3-201ENSMUST00000192503 Cfap99A0A140LIX9 648 aa18.52■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Wdr78E9PYY5 807 aa18.52■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Dhx29Q6PGC1 1365 aaKnown RBP18.52■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Pdia4P08003 638 aaKnown RBP18.52■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Zkscan2G3X952 960 aa18.51■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Ubap1lG3UW59 384 aa18.51■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Cux1P53564 1515 aa18.51■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Smarca2Q6DIC0 1577 aa18.51■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Dctn1O08788 1281 aa18.5■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Synj1Q8CHC4 1574 aa18.5■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Fmnl2A2APV2 1086 aa18.49■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Nectin2P32507 530 aa18.49■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Nutm1Q8BHP2 1126 aa18.49■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Rsph4aQ8BYM7 716 aa18.48■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Kcnh8P59111 1102 aa18.48■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Ppp2r1aQ76MZ3 589 aa18.48■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Necab1Q8BG18 352 aa18.48■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 CastP51125 788 aa18.47■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Rab3gap2Q8BMG7 1366 aa18.47■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 FosbP13346 338 aa18.47■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Trim55G3X8Y1 545 aa18.47■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Gps2Q921N8 327 aa18.46■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 NcapgE9PWG6 1004 aa18.46■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Stk11ipQ3TAA7 1072 aa18.46■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Fam184aE9PW83 1143 aa18.46■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 DmtnQ9WV69 405 aa18.46■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 HdgfP51859 237 aaKnown RBP18.46■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Gcc1Q9D4H2 778 aa18.46■□□□□ 0.55
Pcdha3-201ENSMUST00000192503 Cux2P70298 1426 aa18.45■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Cabp4Q8VHC5 271 aa18.45■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Ncapd3Q6ZQK0 1506 aa18.45■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Znf692Q3U381 531 aa18.44■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 HmmrQ00547 794 aaKnown RBP18.44■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 NexnQ7TPW1 607 aa18.44■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Plekhg5Q66T02 1073 aa18.44■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Ap3b2Q9JME5 1082 aa18.43■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Vps53Q8CCB4 832 aa18.43■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Cecr2E9Q2Z1 1453 aa18.43■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Cog6Q8R3I3 657 aa18.43■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 TimelessQ9R1X4 1197 aa18.43■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Odf2A3KGV1 830 aaKnown RBP18.42■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Kif18aQ91WD7 886 aa18.42■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 NefhP19246 1090 aa18.42■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 TnmdQ9EP64 317 aa18.42■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Mink1Q9JM52 1308 aa18.41■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Cep112Q5PR68 954 aa18.41■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Ccdc102aQ3TMW1 549 aa18.41■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Sv2bQ8BG39 683 aa18.41■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Otud6bQ8K2H2 294 aa18.41■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Nat10Q8K224 1024 aaKnown RBP18.4■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Q9D9S1 216 aa18.4■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Trim29Q8R2Q0 587 aa18.39■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Med4Q9CQA5 270 aa18.39■□□□□ 0.54
Pcdha3-201ENSMUST00000192503 Neurod6P48986 337 aa18.39■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Shq1Q7TMX5 569 aa18.39■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Rsph6aQ8CDR2 708 aa18.39■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 ErbinQ80TH2 1402 aa18.39■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Mcm4P49717 862 aa18.38■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Bag1Q60739 355 aa18.38■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Q8C5K5 320 aa18.38■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Cavin4A2AMM0 362 aa18.38■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Efcab5A0JP43 1406 aa18.37■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Hap1O35668 628 aa18.37■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Ppm1eQ80TL0 749 aa18.37■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Noc3lQ8VI84 807 aaKnown RBP18.37■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Stk3Q9JI10 497 aa18.37■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Babam1Q3UI43 333 aa18.37■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Ppp1r18Q8BQ30 594 aa18.37■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Ccdc43Q9CR29 222 aaKnown RBP18.37■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Pmfbp1Q9WVQ0 1022 aa18.37■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Cc2d2bA0A286YDU8 1405 aa18.37■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Me1P06801 572 aa18.37■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Dusp27Q148W8 1138 aa18.37■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Tubb6Q922F4 447 aa18.37■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Nsd2Q8BVE8 1365 aa18.37■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Spag5Q7TME2 1165 aa18.36■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Cfdp1O88271 295 aaKnown RBP18.36■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Ift140E9PY46 1464 aa18.36■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Nap1l1P28656 391 aaKnown RBP18.36■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Dnaaf4Q8R368 420 aa18.36■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Ift57Q8BXG3 429 aa18.35■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Cnnm3Q32NY4 713 aa18.35■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Cbx1P83917 185 aaKnown RBP18.35■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Smc2Q8CG48 1191 aaKnown RBP18.35■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Stk38Q91VJ4 465 aa18.35■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 March6Q6ZQ89 909 aa18.35■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Syce3B5KM66 88 aa18.34■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 OptnQ8K3K8 584 aa18.34■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 SelenooQ9DBC0 667 aa18.34■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Frmd3Q8BHD4 595 aa18.34■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Krt85Q9Z2T6 507 aa18.34■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Mctp1E9PV86 951 aa18.33■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 CrcpO35427 148 aa18.33■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 ImpactO55091 318 aa18.33■□□□□ 0.53
Pcdha3-201ENSMUST00000192503 Nup88Q8CEC0 753 aaKnown RBP18.33■□□□□ 0.52
Pcdha3-201ENSMUST00000192503 Nphp1Q9QY53 687 aa18.33■□□□□ 0.52
Pcdha3-201ENSMUST00000192503 Ccp110Q7TSH4 1004 aa18.33■□□□□ 0.52
Pcdha3-201ENSMUST00000192503 Ccdc83Q9D4V3 305 aa18.33■□□□□ 0.52
Pcdha3-201ENSMUST00000192503 Gsto1O09131 240 aa18.32■□□□□ 0.52
Pcdha3-201ENSMUST00000192503 Phldb2Q8K1N2 1249 aa18.32■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms