RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Ncbp3Q8BZR9 615 aaKnown RBP18.82■□□□□ 0.6
Ubr2-201ENSMUST00000113335 Kif3aP28741 701 aa18.82■□□□□ 0.6
Ubr2-201ENSMUST00000113335 Bcl2l13P59017 434 aa18.81■□□□□ 0.6
Ubr2-201ENSMUST00000113335 Gsto1O09131 240 aa18.81■□□□□ 0.6
Ubr2-201ENSMUST00000113335 Gtf2f1Q3THK3 508 aaKnown RBP18.81■□□□□ 0.6
Ubr2-201ENSMUST00000113335 March6Q6ZQ89 909 aa18.81■□□□□ 0.6
Ubr2-201ENSMUST00000113335 Slc4a2P13808 1237 aaKnown RBP18.81■□□□□ 0.6
Ubr2-201ENSMUST00000113335 Rbm10Q99KG3 930 aaKnown RBP18.8■□□□□ 0.6
Ubr2-201ENSMUST00000113335 Me1P06801 572 aa18.8■□□□□ 0.6
Ubr2-201ENSMUST00000113335 BcanQ61361 883 aa18.79■□□□□ 0.6
Ubr2-201ENSMUST00000113335 Sycp2Q9CUU3 1500 aa18.79■□□□□ 0.6
Ubr2-201ENSMUST00000113335 PnisrA2AJT4 805 aaKnown RBP18.79■□□□□ 0.6
Ubr2-201ENSMUST00000113335 Psma5Q9Z2U1 241 aaKnown RBP18.79■□□□□ 0.6
Ubr2-201ENSMUST00000113335 Zfp444Q3TDV8 331 aaKnown RBP18.78■□□□□ 0.6
Ubr2-201ENSMUST00000113335 1700010I14RikQ7TPG0 532 aa18.78■□□□□ 0.6
Ubr2-201ENSMUST00000113335 Babam1Q3UI43 333 aa18.78■□□□□ 0.6
Ubr2-201ENSMUST00000113335 Gsdma3Q5Y4Y6 464 aa18.78■□□□□ 0.6
Ubr2-201ENSMUST00000113335 Mphosph10Q810V0 681 aaKnown RBP18.77■□□□□ 0.6
Ubr2-201ENSMUST00000113335 LrpprcQ6PB66 1392 aaKnown RBP18.77■□□□□ 0.6
Ubr2-201ENSMUST00000113335 Ttll5Q8CHB8 1328 aa18.77■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Fyb1O35601 819 aa18.77■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Mcm2P97310 904 aa18.76■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Mns1Q61884 491 aa18.76■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Nap1l1P28656 391 aaKnown RBP18.76■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Ppp2r1aQ76MZ3 589 aa18.76■□□□□ 0.59
Ubr2-201ENSMUST00000113335 NexnQ7TPW1 607 aa18.76■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Fmnl2A2APV2 1086 aa18.76■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Zkscan2G3X952 960 aa18.76■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Cdkn1cP49919 348 aa18.75■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Trim29Q8R2Q0 587 aa18.75■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Zfp644E9QA22 1323 aa18.75■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Puf60Q3UEB3 564 aaKnown RBP18.75■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Fnbp4Q6ZQ03 1031 aa18.75■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Dusp9Q7TNL7 452 aa18.75■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Necab1Q8BG18 352 aa18.75■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Ccdc171E9Q1U1 1324 aa18.75■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Hdgfl1Q2VPR5 283 aa18.74■□□□□ 0.59
Ubr2-201ENSMUST00000113335 HmmrQ00547 794 aaKnown RBP18.74■□□□□ 0.59
Ubr2-201ENSMUST00000113335 AnlnQ8K298 1121 aaKnown RBP18.74■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Phldb1Q6PDH0 1371 aaKnown RBP18.74■□□□□ 0.59
Ubr2-201ENSMUST00000113335 PdcQ9QW08 244 aa18.74■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Rsph6aQ8CDR2 708 aa18.74■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Ppm1fQ8CGA0 452 aa18.74■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Cux1P53564 1515 aa18.73■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Dhx29Q6PGC1 1365 aaKnown RBP18.72■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Rrp9Q91WM3 475 aaKnown RBP18.72■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Sycp1Q62209 993 aa18.72■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Zkscan1Q8BGS3 561 aaKnown RBP18.72■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Nsd2Q8BVE8 1365 aa18.71■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Cwc15Q9JHS9 229 aaKnown RBP18.71■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Ncoa2Q61026 1462 aa18.71■□□□□ 0.59
Ubr2-201ENSMUST00000113335 Vps8Q0P5W1 1427 aa18.7■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Olfml1Q8BSH2 233 aa18.7■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Apaf1O88879 1249 aa18.7■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Kcnh8P59111 1102 aa18.7■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Rab3gap2Q8BMG7 1366 aa18.7■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Smarca2Q6DIC0 1577 aa18.69■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Znf704Q9ERQ3 566 aa18.69■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Atp2b2Q9R0K7 1198 aa18.69■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Abl1P00520 1123 aa18.68■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Rbm28Q8CGC6 750 aaKnown RBP18.68■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Tmc1Q8R4P5 757 aa18.68■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Kif3cO35066 796 aa18.68■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Tmco3Q8BH01 678 aa18.67■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Cog6Q8R3I3 657 aa18.67■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Cavin4A2AMM0 362 aa18.67■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Nop14Q8R3N1 860 aaKnown RBP18.67■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Q9D9S1 216 aa18.67■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Pde4cQ3UEI1 686 aa18.66■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Eva1cP58659 440 aa18.66■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Znf771Q8BJ90 317 aa18.66■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Q9D9H8 365 aa18.66■□□□□ 0.58
Ubr2-201ENSMUST00000113335 FanciQ8K368 1330 aa18.65■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Crybg2B7ZCC2 1516 aa18.65■□□□□ 0.58
Ubr2-201ENSMUST00000113335 NefhP19246 1090 aa18.65■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Stk38Q91VJ4 465 aa18.65■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Nphp1Q9QY53 687 aa18.65■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Chaf1aQ9QWF0 911 aa18.65■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Ift140E9PY46 1464 aa18.64■□□□□ 0.58
Ubr2-201ENSMUST00000113335 Paf1Q8K2T8 535 aa18.64■□□□□ 0.58
Ubr2-201ENSMUST00000113335 TatQ8QZR1 454 aa18.64■□□□□ 0.58
Ubr2-201ENSMUST00000113335 UvssaQ9D479 717 aa18.64■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Phf14Q9D4H9 881 aa18.64■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Gnai2P08752 355 aaKnown RBP18.64■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Jph4Q80WT0 628 aa18.64■□□□□ 0.57
Ubr2-201ENSMUST00000113335 MpripP97434 1024 aa18.64■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Ssh1Q76I79 1042 aa18.64■□□□□ 0.57
Ubr2-201ENSMUST00000113335 SelenooQ9DBC0 667 aa18.63■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Gm10471E9Q1C7 252 aa18.63■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Smc2Q8CG48 1191 aaKnown RBP18.63■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Fez1Q8K0X8 392 aa18.63■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Agtpbp1Q641K1 1218 aa18.63■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Chrna2Q91X60 512 aa18.63■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Odf2lQ9D478 642 aa18.63■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Rad54l2Q99NG0 1466 aa18.62■□□□□ 0.57
Ubr2-201ENSMUST00000113335 TnmdQ9EP64 317 aa18.62■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Cnnm3Q32NY4 713 aa18.62■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Soga1E1U8D0 1418 aa18.62■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Sptbn5F6UCX4 1208 aa18.62■□□□□ 0.57
Ubr2-201ENSMUST00000113335 Dctn1O08788 1281 aa18.62■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 33.5 ms