RNA–Protein interactions for RNA: ENSMUST00000111046.8

Bdnf-206, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,819 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-206ENSMUST00000111046 AdgbG3UZ78 1657 aa11.21□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Znf330Q922H9 316 aa11.21□□□□□ -0.62
Bdnf-206ENSMUST00000111046 AglF8VPN4 1532 aa11.21□□□□□ -0.62
Bdnf-206ENSMUST00000111046 1700019A02RikA0A087WPV9 146 aa11.2□□□□□ -0.62
Bdnf-206ENSMUST00000111046 ChgaP26339 463 aaKnown RBP11.2□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Gm156Q58A37 223 aa11.2□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Cluap1Q8R3P7 413 aa11.2□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Ttll13A4Q9F6 804 aa11.2□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Kif1bQ60575 1816 aaKnown RBP11.2□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Apaf1O88879 1249 aa11.2□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Trim58Q5NCC9 485 aa11.2□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Abca6Q8K441 1624 aa11.19□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Cald1E9QA15 768 aaKnown RBP11.19□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Dnai1Q8C0M8 701 aa11.19□□□□□ -0.62
Bdnf-206ENSMUST00000111046 U2surpQ6NV83 1029 aaKnown RBP11.19□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Pank1Q8K4K6 548 aa11.19□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Senp3Q9EP97 568 aaKnown RBP11.18□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Abca8aQ8K442 1620 aa11.18□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Prex1Q69ZK0 1650 aa11.17□□□□□ -0.62
Bdnf-206ENSMUST00000111046 MyclP10166 368 aa11.17□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Sbno1Q689Z5 1390 aa11.17□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Map7O88735 730 aa11.17□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Chmp4bQ9D8B3 224 aaKnown RBP11.17□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Zmym4A2A791 1549 aaKnown RBP11.17□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Ipo8Q7TMY7 1010 aa11.17□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Ccdc60Q8C4J0 545 aa11.16□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Bcl11aQ9QYE3 773 aa11.16□□□□□ -0.62
Bdnf-206ENSMUST00000111046 FanciQ8K368 1330 aa11.16□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Clasp1Q80TV8 1535 aaKnown RBP11.16□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Uggt2E9Q4X2 1504 aa11.16□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Iqgap3F8VQ29 1632 aa11.15□□□□□ -0.62
Bdnf-206ENSMUST00000111046 AnkarA2RT91 1465 aa11.15□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Zfp777B9EKF4 885 aa11.15□□□□□ -0.62
Bdnf-206ENSMUST00000111046 Sox12Q04890 314 aa11.15□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Cdk19Q8BWD8 501 aa11.15□□□□□ -0.63
Bdnf-206ENSMUST00000111046 CatipB9EKE5 520 aa11.14□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Tulp4Q9JIL5 1547 aa11.14□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Irx6Q9ER75 438 aa11.14□□□□□ -0.63
Bdnf-206ENSMUST00000111046 AatkQ80YE4 1365 aa11.13□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Atf7ipQ7TT18 1306 aa11.13□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Ccdc9Q8VC31 543 aaKnown RBP11.13□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Ciz1Q8VEH2 845 aa11.13□□□□□ -0.63
Bdnf-206ENSMUST00000111046 RereQ80TZ9 1558 aa11.13□□□□□ -0.63
Bdnf-206ENSMUST00000111046 G3bp1P97855 465 aaKnown RBP11.12□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Dip2cE9PWR4 1557 aa11.12□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Sipa1l1Q8C0T5 1782 aa11.12□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Dusp27Q148W8 1138 aa11.12□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Liat1Q810M6 228 aa11.12□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Znf518aB2RRF6 1478 aaKnown RBP11.12□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Setd1aE9PYH6 1716 aa11.12□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Map4k4P97820 1233 aaKnown RBP11.12□□□□□ -0.63
Bdnf-206ENSMUST00000111046 KnstrnQ9D9Z1 312 aaKnown RBP11.11□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Cdc42bpgQ80UW5 1551 aa11.11□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Cavin4A2AMM0 362 aa11.11□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Ehbp1l1Q99MS7 1716 aa11.11□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Atp10aO54827 1508 aa11.11□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Erbb3Q61526 1339 aa11.1□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Gm16486A0A1D5RMD1 1434 aa11.1□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Rtf1A2AQ19 715 aaKnown RBP11.1□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Htatsf1Q8BGC0 757 aa11.1□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Atxn3Q9CVD2 355 aa11.1□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Swt1Q9DBQ9 907 aa11.1□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Gli2Q0VGT2 1544 aa11.1□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Rbm25B2RY56 838 aaKnown RBP11.1□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Uspl1Q3ULM6 1089 aa11.1□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Stk31Q99MW1 1018 aa11.1□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Ino80Q6ZPV2 1559 aa11.1□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Cdk5rap2Q8K389 1822 aa11.09□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Ptch1Q61115 1434 aa11.09□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Ttc37F8VPK0 1563 aa11.09□□□□□ -0.63
Bdnf-206ENSMUST00000111046 AampJ3QN89 436 aa11.09□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Zranb1Q7M760 708 aa11.09□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Akap12Q9WTQ5 1684 aa11.09□□□□□ -0.63
Bdnf-206ENSMUST00000111046 Ak7Q9D2H2 614 aa11.09□□□□□ -0.63
Bdnf-206ENSMUST00000111046 InsrP15208 1372 aa11.08□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Tspyl2Q7TQI8 677 aa11.08□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Myom1Q62234 1667 aaKnown RBP11.08□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Nphp4P59240 1425 aa11.08□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Pibf1E9Q6K3 756 aa11.08□□□□□ -0.64
Bdnf-206ENSMUST00000111046 HnrnpuQ8VEK3 800 aaKnown RBP11.08□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Depdc5P61460 1591 aa11.07□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Mfap1aC0HKD8 439 aaKnown RBP11.07□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Mfap1bC0HKD9 439 aaKnown RBP11.07□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Tex14Q7M6U3 1450 aa11.07□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Cabp4Q8VHC5 271 aa11.06□□□□□ -0.64
Bdnf-206ENSMUST00000111046 IbtkQ6ZPR6 1352 aaKnown RBP11.06□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Sart3Q9JLI8 962 aaKnown RBP11.06□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Nectin2P32507 530 aa11.05□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Eif2s2Q99L45 331 aaKnown RBP11.05□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Ift172Q6VH22 1749 aa11.05□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Adgrb3Q80ZF8 1522 aa11.05□□□□□ -0.64
Bdnf-206ENSMUST00000111046 KarsQ99MN1 595 aaKnown RBP11.05□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Ccdc183A2AJB1 534 aa11.05□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Gnai1B2RSH2 354 aa11.05□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Atl3Q91YH5 541 aa11.05□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Gnai3Q9DC51 354 aa11.05□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Ap3b2Q9JME5 1082 aa11.05□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Adgrl3Q80TS3 1537 aa11.04□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Plch2A2AP18 1501 aa11.04□□□□□ -0.64
Bdnf-206ENSMUST00000111046 Nutm1Q8BHP2 1126 aa11.04□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 81.2 ms