RNA–Protein interactions for RNA: ENSMUST00000111042.2

Bdnf-202, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 3,905 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-202ENSMUST00000111042 Znf518aB2RRF6 1478 aaKnown RBP10.59□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Gm32742A0A1B0GT42 1604 aa10.59□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Ak7Q9D2H2 614 aa10.59□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Chmp4bQ9D8B3 224 aaKnown RBP10.59□□□□□ -0.71
Bdnf-202ENSMUST00000111042 Gli2Q0VGT2 1544 aa10.58□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Atf7ipQ7TT18 1306 aa10.58□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Rbm25B2RY56 838 aaKnown RBP10.58□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Nectin2P32507 530 aa10.58□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Map4k4P97820 1233 aaKnown RBP10.58□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Uspl1Q3ULM6 1089 aa10.58□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Gm16486A0A1D5RMD1 1434 aa10.58□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Kdm5cP41230 1554 aa10.57□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Cavin4A2AMM0 362 aa10.57□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Rtf1A2AQ19 715 aaKnown RBP10.57□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Mfap1aC0HKD8 439 aaKnown RBP10.57□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Mfap1bC0HKD9 439 aaKnown RBP10.57□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Swt1Q9DBQ9 907 aa10.57□□□□□ -0.72
Bdnf-202ENSMUST00000111042 PtprtQ99M80 1454 aa10.57□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Tulp4Q9JIL5 1547 aa10.57□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Nutm1Q8BHP2 1126 aa10.57□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Stk31Q99MW1 1018 aa10.57□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Abcc3B2RX12 1523 aa10.56□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Eif2s2Q99L45 331 aaKnown RBP10.56□□□□□ -0.72
Bdnf-202ENSMUST00000111042 KnstrnQ9D9Z1 312 aaKnown RBP10.56□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Sart3Q9JLI8 962 aaKnown RBP10.56□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Cep170Q6A065 1588 aa10.56□□□□□ -0.72
Bdnf-202ENSMUST00000111042 NhsB1AV60 1647 aa10.55□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Htatsf1Q8BGC0 757 aa10.55□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Ciz1Q8VEH2 845 aa10.55□□□□□ -0.72
Bdnf-202ENSMUST00000111042 KarsQ99MN1 595 aaKnown RBP10.55□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Nphp4P59240 1425 aa10.55□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Cabp4Q8VHC5 271 aa10.55□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Zfp777B9EKF4 885 aa10.54□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Ccdc9Q8VC31 543 aaKnown RBP10.54□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Tex14Q7M6U3 1450 aa10.54□□□□□ -0.72
Bdnf-202ENSMUST00000111042 PalmQ9Z0P4 383 aa10.54□□□□□ -0.72
Bdnf-202ENSMUST00000111042 InsrP15208 1372 aa10.54□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Gas2l2Q5SSG4 860 aa10.53□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Bcl11aQ9QYE3 773 aa10.53□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Ccdc183A2AJB1 534 aa10.53□□□□□ -0.72
Bdnf-202ENSMUST00000111042 Usp16Q99LG0 825 aa10.53□□□□□ -0.72
Bdnf-202ENSMUST00000111042 HnrnpmQ9D0E1 729 aaKnown RBP10.52□□□□□ -0.72
Bdnf-202ENSMUST00000111042 AU022751B1B0V2 589 aa10.52□□□□□ -0.73
Bdnf-202ENSMUST00000111042 DekQ7TNV0 380 aaKnown RBP10.52□□□□□ -0.73
Bdnf-202ENSMUST00000111042 HnrnpuQ8VEK3 800 aaKnown RBP10.52□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Nos1Q9Z0J4 1429 aa10.52□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Abca8bQ8K440 1620 aa10.52□□□□□ -0.73
Bdnf-202ENSMUST00000111042 IbtkQ6ZPR6 1352 aaKnown RBP10.52□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Spryd3E9Q9B3 442 aa10.52□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Tnnt1O88346 262 aa10.52□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Vsig10D3YX43 558 aa10.52□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Q3TQI7 289 aaKnown RBP10.52□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Ap3b2Q9JME5 1082 aa10.52□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Hecw1Q8K4P8 1604 aa10.51□□□□□ -0.73
Bdnf-202ENSMUST00000111042 PalldQ9ET54 1408 aa10.51□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Gnai1B2RSH2 354 aa10.51□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Smc5Q8CG46 1101 aaKnown RBP10.51□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Slc12a5Q91V14 1138 aa10.51□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Gnai3Q9DC51 354 aa10.51□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Lrrc7Q80TE7 1490 aa10.51□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Neurl4Q5NCX5 1563 aa10.51□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Iqgap1Q9JKF1 1657 aaKnown RBP10.5□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Zcchc11B2RX14 1644 aaKnown RBP10.5□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Gm21190A0A0G2JGJ6 266 aa10.5□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Plcb2A3KGF7 1181 aa10.5□□□□□ -0.73
Bdnf-202ENSMUST00000111042 AampJ3QN89 436 aa10.5□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Cdc42bpbQ7TT50 1713 aa10.5□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Pola1P33609 1465 aa10.5□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Prrc2bQ7TPM1 1486 aaKnown RBP10.5□□□□□ -0.73
Bdnf-202ENSMUST00000111042 GorabQ8BRM2 368 aa10.5□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Atl3Q91YH5 541 aa10.5□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Adamts13Q769J6 1426 aa10.5□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Talpid3E9PV87 1520 aa10.5□□□□□ -0.73
Bdnf-202ENSMUST00000111042 MpripP97434 1024 aa10.5□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Egfem1Q8C088 590 aa10.5□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Cabp2Q9JLK4 216 aa10.5□□□□□ -0.73
Bdnf-202ENSMUST00000111042 NinlQ6ZQ12 1394 aa10.49□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Myo3aQ8K3H5 1613 aa10.49□□□□□ -0.73
Bdnf-202ENSMUST00000111042 AnkarA2RT91 1465 aa10.49□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Ccdc146E9Q9F7 977 aa10.49□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Chd1P40201 1711 aa10.49□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Asxl2Q8BZ32 1370 aa10.48□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Ccdc171E9Q1U1 1324 aa10.48□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Fchsd2Q3USJ8 740 aa10.48□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Ppp2r3aB2RXC8 1150 aa10.47□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Zfyve16Q80U44 1528 aa10.47□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Ric3Q8BPM6 367 aa10.47□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Maco1Q7TQE6 664 aaKnown RBP10.47□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Mre11Q61216 706 aa10.46□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Kiaa1210E9Q0C6 1637 aa10.46□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Skint5A7XUY5 1461 aa10.46□□□□□ -0.73
Bdnf-202ENSMUST00000111042 MlecQ6ZQI3 291 aaKnown RBP10.46□□□□□ -0.73
Bdnf-202ENSMUST00000111042 Cdc37l1Q9CZP7 335 aa10.46□□□□□ -0.73
Bdnf-202ENSMUST00000111042 ShprhQ7TPQ3 1674 aa10.46□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Plch2A2AP18 1501 aa10.46□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Triml2E9PW10 424 aa10.46□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Cfap65Q3V0B4 1847 aa10.46□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Uggt2E9Q4X2 1504 aa10.45□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Cc2d1aQ8K1A6 943 aa10.45□□□□□ -0.74
Bdnf-202ENSMUST00000111042 Col17a1Q07563 1470 aa10.45□□□□□ -0.74
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms