RNA–Protein interactions for RNA: ENSMUST00000093049.9

Def8-203, Transcript of Differentially expressed in FDCP 8, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Def8, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Def8-203ENSMUST00000093049 Hfm1D3Z4R1 1434 aa17.44■□□□□ 0.38
Def8-203ENSMUST00000093049 Rad21Q61550 635 aaKnown RBP17.43■□□□□ 0.38
Def8-203ENSMUST00000093049 Prrc2bQ7TPM1 1486 aaKnown RBP17.42■□□□□ 0.38
Def8-203ENSMUST00000093049 Stag3O70576 1240 aa17.42■□□□□ 0.38
Def8-203ENSMUST00000093049 PtprmP28828 1452 aa17.42■□□□□ 0.38
Def8-203ENSMUST00000093049 Usp19Q3UJD6 1360 aa17.41■□□□□ 0.38
Def8-203ENSMUST00000093049 Arhgap23Q69ZH9 1483 aa17.41■□□□□ 0.38
Def8-203ENSMUST00000093049 IqubQ8CDK3 788 aa17.41■□□□□ 0.38
Def8-203ENSMUST00000093049 TnikP83510 1323 aa17.4■□□□□ 0.38
Def8-203ENSMUST00000093049 CrbnQ8C7D2 445 aa17.39■□□□□ 0.37
Def8-203ENSMUST00000093049 Kiaa1107Q80TK0 1369 aa17.39■□□□□ 0.37
Def8-203ENSMUST00000093049 CenpjQ569L8 1344 aa17.39■□□□□ 0.37
Def8-203ENSMUST00000093049 Kcnh8P59111 1102 aa17.39■□□□□ 0.37
Def8-203ENSMUST00000093049 Kif13aQ9EQW7 1749 aa17.38■□□□□ 0.37
Def8-203ENSMUST00000093049 Itsn1Q9Z0R4 1714 aa17.38■□□□□ 0.37
Def8-203ENSMUST00000093049 Rsph4aQ8BYM7 716 aa17.37■□□□□ 0.37
Def8-203ENSMUST00000093049 Nrxn1Q9CS84 1514 aa17.37■□□□□ 0.37
Def8-203ENSMUST00000093049 Liat1Q810M6 228 aa17.37■□□□□ 0.37
Def8-203ENSMUST00000093049 Nlrp6Q91WS2 869 aa17.37■□□□□ 0.37
Def8-203ENSMUST00000093049 Scaf11E9PZM7 1456 aaKnown RBP17.36■□□□□ 0.37
Def8-203ENSMUST00000093049 Arhgef28P97433 1693 aa17.36■□□□□ 0.37
Def8-203ENSMUST00000093049 Plekhh1Q80TI1 1356 aa17.36■□□□□ 0.37
Def8-203ENSMUST00000093049 CltcQ68FD5 1675 aaKnown RBP17.35■□□□□ 0.37
Def8-203ENSMUST00000093049 Cnga1P29974 684 aa17.35■□□□□ 0.37
Def8-203ENSMUST00000093049 Ppp1r18Q8BQ30 594 aa17.35■□□□□ 0.37
Def8-203ENSMUST00000093049 Prkrip1Q9CWV6 186 aaKnown RBP17.35■□□□□ 0.37
Def8-203ENSMUST00000093049 Adgrl1Q80TR1 1466 aa17.34■□□□□ 0.37
Def8-203ENSMUST00000093049 IbtkQ6ZPR6 1352 aaKnown RBP17.33■□□□□ 0.37
Def8-203ENSMUST00000093049 RictorQ6QI06 1708 aa17.33■□□□□ 0.36
Def8-203ENSMUST00000093049 Tcerg1Q8CGF7 1100 aaKnown RBP17.33■□□□□ 0.36
Def8-203ENSMUST00000093049 Naip7Q9JIB3 1402 aa17.32■□□□□ 0.36
Def8-203ENSMUST00000093049 Cep170bQ80U49 1574 aa17.32■□□□□ 0.36
Def8-203ENSMUST00000093049 NpatQ8BMA5 1420 aa17.31■□□□□ 0.36
Def8-203ENSMUST00000093049 Med14A2ABV5 1459 aaKnown RBP17.31■□□□□ 0.36
Def8-203ENSMUST00000093049 NeflP08551 543 aa17.31■□□□□ 0.36
Def8-203ENSMUST00000093049 Mbd3Q9Z2D8 285 aaKnown RBP17.31■□□□□ 0.36
Def8-203ENSMUST00000093049 Uspl1Q3ULM6 1089 aa17.3■□□□□ 0.36
Def8-203ENSMUST00000093049 Golga2Q921M4 999 aa17.3■□□□□ 0.36
Def8-203ENSMUST00000093049 Afap1Q80YS6 731 aa17.29■□□□□ 0.36
Def8-203ENSMUST00000093049 Speer4f1Q9D5Q6 258 aa17.29■□□□□ 0.36
Def8-203ENSMUST00000093049 Zc3h13E9Q784 1729 aaKnown RBP17.29■□□□□ 0.36
Def8-203ENSMUST00000093049 Cald1E9QA15 768 aaKnown RBP17.29■□□□□ 0.36
Def8-203ENSMUST00000093049 Map4k4P97820 1233 aaKnown RBP17.29■□□□□ 0.36
Def8-203ENSMUST00000093049 Shq1Q7TMX5 569 aa17.29■□□□□ 0.36
Def8-203ENSMUST00000093049 Iqsec2Q5DU25 1478 aa17.28■□□□□ 0.36
Def8-203ENSMUST00000093049 Slc4a3P16283 1227 aa17.28■□□□□ 0.36
Def8-203ENSMUST00000093049 Ccdc30Q8BVF4 654 aa17.28■□□□□ 0.36
Def8-203ENSMUST00000093049 Abca14E9Q8F8 1683 aa17.28■□□□□ 0.36
Def8-203ENSMUST00000093049 Plekhg1F6S200 1446 aa17.27■□□□□ 0.36
Def8-203ENSMUST00000093049 P2rx7Q9Z1M0 595 aa17.27■□□□□ 0.36
Def8-203ENSMUST00000093049 Ralbp1Q62172 648 aa17.27■□□□□ 0.35
Def8-203ENSMUST00000093049 PplQ9R269 1755 aa17.26■□□□□ 0.35
Def8-203ENSMUST00000093049 Rtl5Q5DTT4 599 aa17.26■□□□□ 0.35
Def8-203ENSMUST00000093049 Stk26Q99JT2 416 aa17.26■□□□□ 0.35
Def8-203ENSMUST00000093049 Rwdd1Q9CQK7 243 aa17.26■□□□□ 0.35
Def8-203ENSMUST00000093049 NktrP30415 1453 aa17.26■□□□□ 0.35
Def8-203ENSMUST00000093049 GsdmaQ9EST1 446 aa17.24■□□□□ 0.35
Def8-203ENSMUST00000093049 Prdm10Q3UTQ7 1184 aa17.23■□□□□ 0.35
Def8-203ENSMUST00000093049 Exosc9Q9JHI7 438 aaKnown RBP17.23■□□□□ 0.35
Def8-203ENSMUST00000093049 Pak3Q61036 559 aa17.23■□□□□ 0.35
Def8-203ENSMUST00000093049 Ercc6l2Q9JIM3 1537 aa17.22■□□□□ 0.35
Def8-203ENSMUST00000093049 Atp1b4Q99ME6 356 aa17.22■□□□□ 0.35
Def8-203ENSMUST00000093049 Egfem1Q8C088 590 aa17.21■□□□□ 0.35
Def8-203ENSMUST00000093049 Q9D9H8 365 aa17.21■□□□□ 0.35
Def8-203ENSMUST00000093049 Nwd1A6H603 1563 aa17.21■□□□□ 0.34
Def8-203ENSMUST00000093049 Dip2aQ8BWT5 1523 aa17.21■□□□□ 0.34
Def8-203ENSMUST00000093049 Gsto1O09131 240 aa17.19■□□□□ 0.34
Def8-203ENSMUST00000093049 Neurod2Q62414 383 aa17.19■□□□□ 0.34
Def8-203ENSMUST00000093049 Zmym3Q9JLM4 1370 aa17.19■□□□□ 0.34
Def8-203ENSMUST00000093049 Ncbp3Q8BZR9 615 aaKnown RBP17.19■□□□□ 0.34
Def8-203ENSMUST00000093049 Utp14aQ640M1 767 aaKnown RBP17.18■□□□□ 0.34
Def8-203ENSMUST00000093049 Kdm2bQ6P1G2 1309 aa17.18■□□□□ 0.34
Def8-203ENSMUST00000093049 Zranb1Q7M760 708 aa17.17■□□□□ 0.34
Def8-203ENSMUST00000093049 Atp2b2Q9R0K7 1198 aa17.17■□□□□ 0.34
Def8-203ENSMUST00000093049 Cdk19Q8BWD8 501 aa17.15■□□□□ 0.34
Def8-203ENSMUST00000093049 FanciQ8K368 1330 aa17.14■□□□□ 0.34
Def8-203ENSMUST00000093049 Gemin5Q8BX17 1502 aaKnown RBP17.14■□□□□ 0.33
Def8-203ENSMUST00000093049 NinlQ6ZQ12 1394 aa17.14■□□□□ 0.33
Def8-203ENSMUST00000093049 Chd2E9PZM4 1827 aaKnown RBP17.13■□□□□ 0.33
Def8-203ENSMUST00000093049 Znf541Q0GGX2 1363 aa17.12■□□□□ 0.33
Def8-203ENSMUST00000093049 Gas2l2Q5SSG4 860 aa17.12■□□□□ 0.33
Def8-203ENSMUST00000093049 Tsen2Q6P7W5 460 aa17.12■□□□□ 0.33
Def8-203ENSMUST00000093049 Usp32F8VPZ3 1604 aa17.12■□□□□ 0.33
Def8-203ENSMUST00000093049 Adamtsl3G3UXC7 1706 aa17.11■□□□□ 0.33
Def8-203ENSMUST00000093049 U2af1Q9D883 239 aaKnown RBP17.1■□□□□ 0.33
Def8-203ENSMUST00000093049 Atxn3Q9CVD2 355 aa17.09■□□□□ 0.33
Def8-203ENSMUST00000093049 Ttll13A4Q9F6 804 aa17.09■□□□□ 0.33
Def8-203ENSMUST00000093049 Apbb1Q9QXJ1 710 aa17.08■□□□□ 0.33
Def8-203ENSMUST00000093049 Znf521Q6KAS7 1311 aa17.08■□□□□ 0.32
Def8-203ENSMUST00000093049 Cps1Q8C196 1500 aa17.08■□□□□ 0.32
Def8-203ENSMUST00000093049 Apaf1O88879 1249 aa17.08■□□□□ 0.32
Def8-203ENSMUST00000093049 Map3k19E9Q3S4 1311 aa17.06■□□□□ 0.32
Def8-203ENSMUST00000093049 Asxl2Q8BZ32 1370 aa17.06■□□□□ 0.32
Def8-203ENSMUST00000093049 Fam135bQ9DAI6 1403 aa17.06■□□□□ 0.32
Def8-203ENSMUST00000093049 Kif1aP33173 1695 aa17.06■□□□□ 0.32
Def8-203ENSMUST00000093049 Slit3Q9WVB4 1523 aa17.06■□□□□ 0.32
Def8-203ENSMUST00000093049 Uhrf1bp1B2KF50 1429 aa17.05■□□□□ 0.32
Def8-203ENSMUST00000093049 Ciz1Q8VEH2 845 aa17.04■□□□□ 0.32
Def8-203ENSMUST00000093049 Ipo9Q91YE6 1041 aa17.04■□□□□ 0.32
Def8-203ENSMUST00000093049 Smc5Q8CG46 1101 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 22,080 RNA–protein pairs in 55.7 ms