RNA–Protein interactions for RNA: ENSMUST00000092907.11

Rpa1-202, Transcript of Replication protein A 70 kDa DNA-binding subunit, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Rpa1, Length 5,077 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1-202ENSMUST00000092907 Utp14aQ640M1 767 aaKnown RBP12.62□□□□□ -0.39
Rpa1-202ENSMUST00000092907 MaddQ80U28 1577 aa12.61□□□□□ -0.39
Rpa1-202ENSMUST00000092907 Kank1E9Q238 1360 aa12.61□□□□□ -0.39
Rpa1-202ENSMUST00000092907 Stk26Q99JT2 416 aa12.61□□□□□ -0.39
Rpa1-202ENSMUST00000092907 Tubgcp6G5E8P0 1769 aa12.61□□□□□ -0.39
Rpa1-202ENSMUST00000092907 Rwdd1Q9CQK7 243 aa12.6□□□□□ -0.39
Rpa1-202ENSMUST00000092907 Cnga1P29974 684 aa12.59□□□□□ -0.39
Rpa1-202ENSMUST00000092907 Ppp4r2Q0VGB7 417 aa12.59□□□□□ -0.39
Rpa1-202ENSMUST00000092907 Txndc2Q6P902 515 aa12.59□□□□□ -0.39
Rpa1-202ENSMUST00000092907 Plekhh1Q80TI1 1356 aa12.59□□□□□ -0.39
Rpa1-202ENSMUST00000092907 Cdk5rap2Q8K389 1822 aa12.58□□□□□ -0.39
Rpa1-202ENSMUST00000092907 Q7TT23 1179 aa12.58□□□□□ -0.39
Rpa1-202ENSMUST00000092907 Map4k4P97820 1233 aaKnown RBP12.58□□□□□ -0.4
Rpa1-202ENSMUST00000092907 IbtkQ6ZPR6 1352 aaKnown RBP12.58□□□□□ -0.4
Rpa1-202ENSMUST00000092907 GsdmaQ9EST1 446 aa12.58□□□□□ -0.4
Rpa1-202ENSMUST00000092907 4930567H17RikQ3V0K5 233 aa12.57□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Kif16bB1AVY7 1312 aa12.57□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Mapk8ip3Q9ESN9 1337 aa12.57□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Ncbp3Q8BZR9 615 aaKnown RBP12.57□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Zfp444Q3TDV8 331 aaKnown RBP12.57□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Speer4f1Q9D5Q6 258 aa12.56□□□□□ -0.4
Rpa1-202ENSMUST00000092907 AU022751B1B0V2 589 aa12.56□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Atp2b2Q9R0K7 1198 aa12.55□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Ttc41Q692V3 1318 aa12.54□□□□□ -0.4
Rpa1-202ENSMUST00000092907 NudcO35685 332 aaKnown RBP12.54□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Naip7Q9JIB3 1402 aa12.54□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Mink1Q9JM52 1308 aa12.54□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Q9D9H8 365 aa12.54□□□□□ -0.4
Rpa1-202ENSMUST00000092907 CltcQ68FD5 1675 aaKnown RBP12.53□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Cald1E9QA15 768 aaKnown RBP12.53□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Esx1O88933 382 aa12.53□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Prdm10Q3UTQ7 1184 aa12.53□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Sipa1l1Q8C0T5 1782 aa12.52□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Tcerg1Q8CGF7 1100 aaKnown RBP12.52□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Prdm2A2A7B5 1709 aaKnown RBP12.52□□□□□ -0.4
Rpa1-202ENSMUST00000092907 SafbD3YXK2 937 aaKnown RBP12.52□□□□□ -0.4
Rpa1-202ENSMUST00000092907 Iqcf3Q9D498 203 aa12.52□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Cul9Q80TT8 1865 aa12.52□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Gemin5Q8BX17 1502 aaKnown RBP12.51□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Cdk19Q8BWD8 501 aa12.51□□□□□ -0.41
Rpa1-202ENSMUST00000092907 CrbnQ8C7D2 445 aa12.51□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Prkrip1Q9CWV6 186 aaKnown RBP12.51□□□□□ -0.41
Rpa1-202ENSMUST00000092907 U2af1Q9D883 239 aaKnown RBP12.49□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Tsen2Q6P7W5 460 aa12.49□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Pik3r4Q8VD65 1358 aa12.49□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Fchsd2Q3USJ8 740 aa12.49□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Chmp4bQ9D8B3 224 aaKnown RBP12.49□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Zc3h13E9Q784 1729 aaKnown RBP12.48□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Ccdc30Q8BVF4 654 aa12.48□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Dip2aQ8BWT5 1523 aa12.48□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Qser1A2BIE1 1698 aa12.48□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Arhgef28P97433 1693 aa12.48□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Hoxb7P09024 217 aa12.47□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Ccar1Q8CH18 1146 aaKnown RBP12.47□□□□□ -0.41
Rpa1-202ENSMUST00000092907 PzpQ61838 1495 aa12.47□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Scaf11E9PZM7 1456 aaKnown RBP12.47□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Ift172Q6VH22 1749 aa12.47□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Gm38655A0A286YDK6 273 aa12.47□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Myom1Q62234 1667 aaKnown RBP12.46□□□□□ -0.41
Rpa1-202ENSMUST00000092907 Idi2Q8BFZ6 227 aa12.46□□□□□ -0.42
Rpa1-202ENSMUST00000092907 L3mbtl2P59178 703 aa12.46□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Scaf1Q5U4C3 1256 aaKnown RBP12.46□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Neurod2Q62414 383 aa12.46□□□□□ -0.42
Rpa1-202ENSMUST00000092907 RictorQ6QI06 1708 aa12.45□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Adgrl1Q80TR1 1466 aa12.44□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Zmym3Q9JLM4 1370 aa12.44□□□□□ -0.42
Rpa1-202ENSMUST00000092907 PtprmP28828 1452 aa12.43□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Uspl1Q3ULM6 1089 aa12.43□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Sirt1Q923E4 737 aa12.43□□□□□ -0.42
Rpa1-202ENSMUST00000092907 PaskQ8CEE6 1383 aa12.43□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Dnajc5P60904 198 aa12.43□□□□□ -0.42
Rpa1-202ENSMUST00000092907 GphnQ8BUV3 769 aaKnown RBP12.43□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Med14A2ABV5 1459 aaKnown RBP12.43□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Nrxn1Q9CS84 1514 aa12.43□□□□□ -0.42
Rpa1-202ENSMUST00000092907 CatipB9EKE5 520 aa12.43□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Rab11fip3Q8CHD8 1047 aa12.43□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Rims2Q9EQZ7 1530 aa12.42□□□□□ -0.42
Rpa1-202ENSMUST00000092907 TnikP83510 1323 aa12.42□□□□□ -0.42
Rpa1-202ENSMUST00000092907 PplQ9R269 1755 aa12.42□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Ppp1r15aP17564 657 aa12.41□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Cavin4A2AMM0 362 aa12.41□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Lmtk3Q5XJV6 1424 aa12.41□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Znf335A2A5K6 1337 aa12.4□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Trim58Q5NCC9 485 aa12.4□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Ccdc171E9Q1U1 1324 aa12.4□□□□□ -0.42
Rpa1-202ENSMUST00000092907 Plppr3Q7TPB0 716 aa12.39□□□□□ -0.43
Rpa1-202ENSMUST00000092907 Supt16hQ920B9 1047 aa12.39□□□□□ -0.43
Rpa1-202ENSMUST00000092907 Kif13aQ9EQW7 1749 aa12.39□□□□□ -0.43
Rpa1-202ENSMUST00000092907 Polr3glQ8R0C0 218 aa12.39□□□□□ -0.43
Rpa1-202ENSMUST00000092907 Astn2Q80Z10 1352 aa12.39□□□□□ -0.43
Rpa1-202ENSMUST00000092907 NinlQ6ZQ12 1394 aa12.38□□□□□ -0.43
Rpa1-202ENSMUST00000092907 Swt1Q9DBQ9 907 aa12.37□□□□□ -0.43
Rpa1-202ENSMUST00000092907 Itsn1Q9Z0R4 1714 aa12.37□□□□□ -0.43
Rpa1-202ENSMUST00000092907 EspnQ9ET47 871 aa12.37□□□□□ -0.43
Rpa1-202ENSMUST00000092907 Rad17Q6NXW6 688 aa12.37□□□□□ -0.43
Rpa1-202ENSMUST00000092907 Znf541Q0GGX2 1363 aa12.37□□□□□ -0.43
Rpa1-202ENSMUST00000092907 Usp19Q3UJD6 1360 aa12.36□□□□□ -0.43
Rpa1-202ENSMUST00000092907 Fam71e1A1L3C1 212 aa12.36□□□□□ -0.43
Rpa1-202ENSMUST00000092907 Ap3b2Q9JME5 1082 aa12.36□□□□□ -0.43
Rpa1-202ENSMUST00000092907 Cps1Q8C196 1500 aa12.35□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms