RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Kif1bQ60575 1816 aaKnown RBP14.79□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Clasp1Q80TV8 1535 aaKnown RBP14.78□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Cfap74Q3UY96 1578 aa14.78□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Pnmal2G3X9N3 661 aa14.78□□□□□ -0.04
Col9a1-202ENSMUST00000088349 GsdmaQ9EST1 446 aa14.78□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Znf316Q6PGE4 1016 aa14.77□□□□□ -0.04
Col9a1-202ENSMUST00000088349 U2af1Q9D883 239 aaKnown RBP14.77□□□□□ -0.04
Col9a1-202ENSMUST00000088349 Abcc3B2RX12 1523 aa14.77□□□□□ -0.04
Col9a1-202ENSMUST00000088349 AatkQ80YE4 1365 aa14.77□□□□□ -0.05
Col9a1-202ENSMUST00000088349 ShprhQ7TPQ3 1674 aa14.77□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Ylpm1Q9R0I7 1386 aaKnown RBP14.76□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Tnpo1Q8BFY9 898 aaKnown RBP14.76□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Ptch1Q61115 1434 aa14.75□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Znf330Q922H9 316 aa14.75□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Htatsf1Q8BGC0 757 aa14.75□□□□□ -0.05
Col9a1-202ENSMUST00000088349 IqubQ8CDK3 788 aa14.75□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Ppp1r3fQ9JIG4 799 aa14.75□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Kidins220E9Q9B7 1793 aa14.75□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Plin1Q8CGN5 517 aa14.74□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Ipo4Q8VI75 1082 aa14.74□□□□□ -0.05
Col9a1-202ENSMUST00000088349 P2rx7Q9Z1M0 595 aa14.74□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Abca8bQ8K440 1620 aa14.74□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Pdcd11Q6NS46 1862 aaKnown RBP14.74□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Mfap1aC0HKD8 439 aaKnown RBP14.74□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Mfap1bC0HKD9 439 aaKnown RBP14.74□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Fgd1P52734 960 aa14.74□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Shq1Q7TMX5 569 aa14.74□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Ppp2r3aB2RXC8 1150 aa14.74□□□□□ -0.05
Col9a1-202ENSMUST00000088349 AU022751B1B0V2 589 aa14.73□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Robo2Q7TPD3 1470 aa14.73□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Tsen2Q6P7W5 460 aa14.72□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Myo3aQ8K3H5 1613 aa14.72□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Pola1P33609 1465 aa14.72□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Sptbn5F6UCX4 1208 aa14.72□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Q9D9H8 365 aa14.72□□□□□ -0.05
Col9a1-202ENSMUST00000088349 Zmym3Q9JLM4 1370 aa14.7□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Stard8Q8K031 1019 aa14.7□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Dnttip2Q8R2M2 758 aaKnown RBP14.7□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Map4k4P97820 1233 aaKnown RBP14.69□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Xrn1P97789 1719 aaKnown RBP14.69□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Kiaa1210E9Q0C6 1637 aa14.69□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Zfyve16Q80U44 1528 aa14.69□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Znf521Q6KAS7 1311 aa14.69□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Pdlim2Q8R1G6 349 aa14.68□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Adgrl3Q80TS3 1537 aa14.67□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Dnajc5gQ8C632 165 aa14.67□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Abca6Q8K441 1624 aa14.67□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Kdm5aQ3UXZ9 1690 aa14.67□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Cald1E9QA15 768 aaKnown RBP14.67□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Ccar1Q8CH18 1146 aaKnown RBP14.67□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Depdc5P61460 1591 aa14.67□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Rabep1O35551 862 aa14.67□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Nutm1Q8BHP2 1126 aa14.67□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Tmc1Q8R4P5 757 aa14.67□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Utp14aQ640M1 767 aaKnown RBP14.66□□□□□ -0.06
Col9a1-202ENSMUST00000088349 IbtkQ6ZPR6 1352 aaKnown RBP14.66□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Dusp27Q148W8 1138 aa14.65□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Hecw1Q8K4P8 1604 aa14.65□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Neurl4Q5NCX5 1563 aa14.65□□□□□ -0.06
Col9a1-202ENSMUST00000088349 Birc3O08863 600 aa14.64□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Afap1Q80YS6 731 aa14.64□□□□□ -0.07
Col9a1-202ENSMUST00000088349 AnkarA2RT91 1465 aa14.64□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Nos1Q9Z0J4 1429 aa14.64□□□□□ -0.07
Col9a1-202ENSMUST00000088349 OvosQ3UU35 1456 aa14.64□□□□□ -0.07
Col9a1-202ENSMUST00000088349 AU019823E9PUQ3 292 aa14.64□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Asxl2Q8BZ32 1370 aa14.63□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Nphp4P59240 1425 aa14.63□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Itsn2Q9Z0R6 1659 aa14.63□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Tbc1d32Q3URV1 1296 aa14.62□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Nectin2P32507 530 aa14.62□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Ccdc60Q8C4J0 545 aa14.62□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Uggt2E9Q4X2 1504 aa14.62□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Catsper2A2ARP9 588 aa14.62□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Plcb2A3KGF7 1181 aa14.62□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Aplp1Q03157 653 aa14.62□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Gprasp1Q5U4C1 1347 aa14.61□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Abca9Q8K449 1623 aa14.61□□□□□ -0.07
Col9a1-202ENSMUST00000088349 AU015836B2RUM3 263 aa14.61□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Scaf11E9PZM7 1456 aaKnown RBP14.61□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Tmco5bQ80X59 307 aa14.6□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Myom2Q14BI5 1463 aa14.6□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Rfx1P48377 963 aa14.6□□□□□ -0.07
Col9a1-202ENSMUST00000088349 NgefQ8CHT1 710 aa14.6□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Atp2b2Q9R0K7 1198 aa14.6□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Znf692Q3U381 531 aa14.6□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Atl3Q91YH5 541 aa14.6□□□□□ -0.07
Col9a1-202ENSMUST00000088349 CenpjQ569L8 1344 aa14.6□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Fam135bQ9DAI6 1403 aa14.59□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Znf518aB2RRF6 1478 aaKnown RBP14.59□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Maco1Q7TQE6 664 aaKnown RBP14.59□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Myo5cE9Q1F5 1742 aa14.59□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Gli2Q0VGT2 1544 aa14.59□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Vsig10D3YX43 558 aa14.59□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Cog6Q8R3I3 657 aa14.59□□□□□ -0.07
Col9a1-202ENSMUST00000088349 Kif18aQ91WD7 886 aa14.58□□□□□ -0.08
Col9a1-202ENSMUST00000088349 Ssh1Q76I79 1042 aa14.57□□□□□ -0.08
Col9a1-202ENSMUST00000088349 Pknox2Q8BG99 474 aa14.57□□□□□ -0.08
Col9a1-202ENSMUST00000088349 Yeats2Q3TUF7 1407 aa14.57□□□□□ -0.08
Col9a1-202ENSMUST00000088349 DekQ7TNV0 380 aaKnown RBP14.57□□□□□ -0.08
Col9a1-202ENSMUST00000088349 Kcnn1Q9EQR3 537 aa14.57□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms