RNA–Protein interactions for RNA: ENSMUST00000070165.6

Nup98-201, Transcript of Nuclear pore complex protein Nup98-Nup96, mousemouse

TSL 1 (best) BASIC

Gene Nup98, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98-201ENSMUST00000070165 Ercc6l2Q9JIM3 1537 aa17.08■□□□□ 0.33
Nup98-201ENSMUST00000070165 MaddQ80U28 1577 aa17.07■□□□□ 0.32
Nup98-201ENSMUST00000070165 Itsn1Q9Z0R4 1714 aa17.05■□□□□ 0.32
Nup98-201ENSMUST00000070165 Atp2b2Q9R0K7 1198 aa17.05■□□□□ 0.32
Nup98-201ENSMUST00000070165 1700123L14RikQ3V2K7 440 aa17.05■□□□□ 0.32
Nup98-201ENSMUST00000070165 Rad21Q61550 635 aaKnown RBP17.05■□□□□ 0.32
Nup98-201ENSMUST00000070165 SafbD3YXK2 937 aaKnown RBP17.04■□□□□ 0.32
Nup98-201ENSMUST00000070165 Ift172Q6VH22 1749 aa17.04■□□□□ 0.32
Nup98-201ENSMUST00000070165 Esx1O88933 382 aa17.03■□□□□ 0.32
Nup98-201ENSMUST00000070165 Arhgef28P97433 1693 aa17.03■□□□□ 0.32
Nup98-201ENSMUST00000070165 Gm38655A0A286YDK6 273 aa17.03■□□□□ 0.32
Nup98-201ENSMUST00000070165 Gprasp1Q5U4C1 1347 aa17.03■□□□□ 0.32
Nup98-201ENSMUST00000070165 Gsto1O09131 240 aa17.02■□□□□ 0.32
Nup98-201ENSMUST00000070165 Atf7ipQ7TT18 1306 aa17.01■□□□□ 0.31
Nup98-201ENSMUST00000070165 Eif2ak4Q9QZ05 1648 aa17.01■□□□□ 0.31
Nup98-201ENSMUST00000070165 Med14A2ABV5 1459 aaKnown RBP17■□□□□ 0.31
Nup98-201ENSMUST00000070165 Zfp444Q3TDV8 331 aaKnown RBP17■□□□□ 0.31
Nup98-201ENSMUST00000070165 Cdk19Q8BWD8 501 aa17■□□□□ 0.31
Nup98-201ENSMUST00000070165 Cep170bQ80U49 1574 aa17■□□□□ 0.31
Nup98-201ENSMUST00000070165 Plekhg1F6S200 1446 aa16.99■□□□□ 0.31
Nup98-201ENSMUST00000070165 Asxl2Q8BZ32 1370 aa16.99■□□□□ 0.31
Nup98-201ENSMUST00000070165 Zc3h13E9Q784 1729 aaKnown RBP16.99■□□□□ 0.31
Nup98-201ENSMUST00000070165 Adamtsl3G3UXC7 1706 aa16.98■□□□□ 0.31
Nup98-201ENSMUST00000070165 Zranb1Q7M760 708 aa16.97■□□□□ 0.31
Nup98-201ENSMUST00000070165 Upf2A2AT37 1269 aaKnown RBP16.97■□□□□ 0.31
Nup98-201ENSMUST00000070165 CenpbP27790 599 aa16.96■□□□□ 0.3
Nup98-201ENSMUST00000070165 FanciQ8K368 1330 aa16.95■□□□□ 0.3
Nup98-201ENSMUST00000070165 CrbnQ8C7D2 445 aa16.95■□□□□ 0.3
Nup98-201ENSMUST00000070165 PplQ9R269 1755 aa16.94■□□□□ 0.3
Nup98-201ENSMUST00000070165 L3mbtl2P59178 703 aa16.94■□□□□ 0.3
Nup98-201ENSMUST00000070165 Dip2aQ8BWT5 1523 aa16.93■□□□□ 0.3
Nup98-201ENSMUST00000070165 Cald1E9QA15 768 aaKnown RBP16.93■□□□□ 0.3
Nup98-201ENSMUST00000070165 KdrP35918 1367 aa16.93■□□□□ 0.3
Nup98-201ENSMUST00000070165 Golga2Q921M4 999 aa16.92■□□□□ 0.3
Nup98-201ENSMUST00000070165 MyclP10166 368 aa16.91■□□□□ 0.3
Nup98-201ENSMUST00000070165 Kif16bB1AVY7 1312 aa16.9■□□□□ 0.3
Nup98-201ENSMUST00000070165 Gemin5Q8BX17 1502 aaKnown RBP16.9■□□□□ 0.3
Nup98-201ENSMUST00000070165 Scaf11E9PZM7 1456 aaKnown RBP16.9■□□□□ 0.3
Nup98-201ENSMUST00000070165 GsdmaQ9EST1 446 aa16.89■□□□□ 0.29
Nup98-201ENSMUST00000070165 Speer4f1Q9D5Q6 258 aa16.88■□□□□ 0.29
Nup98-201ENSMUST00000070165 Kank1E9Q238 1360 aa16.88■□□□□ 0.29
Nup98-201ENSMUST00000070165 Abca14E9Q8F8 1683 aa16.88■□□□□ 0.29
Nup98-201ENSMUST00000070165 Chd2E9PZM4 1827 aaKnown RBP16.88■□□□□ 0.29
Nup98-201ENSMUST00000070165 Nrxn1Q9CS84 1514 aa16.88■□□□□ 0.29
Nup98-201ENSMUST00000070165 Pcdh10E9PXQ7 1057 aa16.87■□□□□ 0.29
Nup98-201ENSMUST00000070165 IbtkQ6ZPR6 1352 aaKnown RBP16.87■□□□□ 0.29
Nup98-201ENSMUST00000070165 HnrnpmQ9D0E1 729 aaKnown RBP16.87■□□□□ 0.29
Nup98-201ENSMUST00000070165 Znf316Q6PGE4 1016 aa16.86■□□□□ 0.29
Nup98-201ENSMUST00000070165 NinlQ6ZQ12 1394 aa16.86■□□□□ 0.29
Nup98-201ENSMUST00000070165 PzpQ61838 1495 aa16.86■□□□□ 0.29
Nup98-201ENSMUST00000070165 Kiaa1107Q80TK0 1369 aa16.85■□□□□ 0.29
Nup98-201ENSMUST00000070165 IghaA0A0A6YXW6 389 aa16.85■□□□□ 0.29
Nup98-201ENSMUST00000070165 Neurod2Q62414 383 aa16.85■□□□□ 0.29
Nup98-201ENSMUST00000070165 Tsen2Q6P7W5 460 aa16.83■□□□□ 0.28
Nup98-201ENSMUST00000070165 U2af1Q9D883 239 aaKnown RBP16.83■□□□□ 0.28
Nup98-201ENSMUST00000070165 Map3k19E9Q3S4 1311 aa16.82■□□□□ 0.28
Nup98-201ENSMUST00000070165 Adgrl1Q80TR1 1466 aa16.82■□□□□ 0.28
Nup98-201ENSMUST00000070165 NktrP30415 1453 aa16.82■□□□□ 0.28
Nup98-201ENSMUST00000070165 NeflP08551 543 aa16.82■□□□□ 0.28
Nup98-201ENSMUST00000070165 GphnQ8BUV3 769 aaKnown RBP16.82■□□□□ 0.28
Nup98-201ENSMUST00000070165 Anp32aO35381 247 aa16.81■□□□□ 0.28
Nup98-201ENSMUST00000070165 Map4k4P97820 1233 aaKnown RBP16.81■□□□□ 0.28
Nup98-201ENSMUST00000070165 Slit3Q9WVB4 1523 aa16.81■□□□□ 0.28
Nup98-201ENSMUST00000070165 Erbb3Q61526 1339 aa16.81■□□□□ 0.28
Nup98-201ENSMUST00000070165 Nwd1A6H603 1563 aa16.81■□□□□ 0.28
Nup98-201ENSMUST00000070165 P2rx7Q9Z1M0 595 aa16.81■□□□□ 0.28
Nup98-201ENSMUST00000070165 Usp19Q3UJD6 1360 aa16.8■□□□□ 0.28
Nup98-201ENSMUST00000070165 Wdr43Q6ZQL4 677 aaKnown RBP16.8■□□□□ 0.28
Nup98-201ENSMUST00000070165 Idi2Q8BFZ6 227 aa16.8■□□□□ 0.28
Nup98-201ENSMUST00000070165 Ralbp1Q62172 648 aa16.8■□□□□ 0.28
Nup98-201ENSMUST00000070165 Dnajc5P60904 198 aa16.79■□□□□ 0.28
Nup98-201ENSMUST00000070165 Uspl1Q3ULM6 1089 aa16.79■□□□□ 0.28
Nup98-201ENSMUST00000070165 Pik3r4Q8VD65 1358 aa16.79■□□□□ 0.28
Nup98-201ENSMUST00000070165 Ccdc30Q8BVF4 654 aa16.79■□□□□ 0.28
Nup98-201ENSMUST00000070165 Dip2bQ3UH60 1574 aa16.78■□□□□ 0.28
Nup98-201ENSMUST00000070165 Ppp4r2Q0VGB7 417 aa16.78■□□□□ 0.28
Nup98-201ENSMUST00000070165 Q3UJC8 639 aa16.78■□□□□ 0.28
Nup98-201ENSMUST00000070165 MlecQ6ZQI3 291 aaKnown RBP16.78■□□□□ 0.28
Nup98-201ENSMUST00000070165 4930407I10RikD3Z5T8 1512 aa16.76■□□□□ 0.27
Nup98-201ENSMUST00000070165 Cps1Q8C196 1500 aa16.76■□□□□ 0.27
Nup98-201ENSMUST00000070165 Birc3O08863 600 aa16.76■□□□□ 0.27
Nup98-201ENSMUST00000070165 Plekhh1Q80TI1 1356 aa16.76■□□□□ 0.27
Nup98-201ENSMUST00000070165 Tcerg1Q8CGF7 1100 aaKnown RBP16.75■□□□□ 0.27
Nup98-201ENSMUST00000070165 CatipB9EKE5 520 aa16.75■□□□□ 0.27
Nup98-201ENSMUST00000070165 Rwdd1Q9CQK7 243 aa16.74■□□□□ 0.27
Nup98-201ENSMUST00000070165 NgefQ8CHT1 710 aa16.74■□□□□ 0.27
Nup98-201ENSMUST00000070165 Mapk8ip3Q9ESN9 1337 aa16.73■□□□□ 0.27
Nup98-201ENSMUST00000070165 Apaf1O88879 1249 aa16.73■□□□□ 0.27
Nup98-201ENSMUST00000070165 PtpruB1AUH1 1446 aa16.72■□□□□ 0.27
Nup98-201ENSMUST00000070165 Ttc41Q692V3 1318 aa16.71■□□□□ 0.27
Nup98-201ENSMUST00000070165 Sirt1Q923E4 737 aa16.71■□□□□ 0.27
Nup98-201ENSMUST00000070165 Bcl9Q9D219 1425 aa16.71■□□□□ 0.27
Nup98-201ENSMUST00000070165 Pik3c2bE9QAN8 1632 aa16.68■□□□□ 0.26
Nup98-201ENSMUST00000070165 Rreb1Q3UH06 1700 aaKnown RBP16.68■□□□□ 0.26
Nup98-201ENSMUST00000070165 Sox12Q04890 314 aa16.68■□□□□ 0.26
Nup98-201ENSMUST00000070165 Mbd3Q9Z2D8 285 aaKnown RBP16.67■□□□□ 0.26
Nup98-201ENSMUST00000070165 Slc12a5Q91V14 1138 aa16.67■□□□□ 0.26
Nup98-201ENSMUST00000070165 Apbb1Q9QXJ1 710 aa16.67■□□□□ 0.26
Nup98-201ENSMUST00000070165 Usp32F8VPZ3 1604 aa16.67■□□□□ 0.26
Nup98-201ENSMUST00000070165 Arap3Q8R5G7 1538 aa16.67■□□□□ 0.26
Retrieved 100 of 22,080 RNA–protein pairs in 137 ms