RNA–Protein interactions for RNA: ENSMUST00000070165.6

Nup98-201, Transcript of Nuclear pore complex protein Nup98-Nup96, mousemouse

TSL 1 (best) BASIC

Gene Nup98, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98-201ENSMUST00000070165 NischQ80TM9 1593 aa25.88■■□□□ 1.73
Nup98-201ENSMUST00000070165 Gm35339A0A140LHH9 1649 aa25.56■■□□□ 1.68
Nup98-201ENSMUST00000070165 Abcc9P70170 1546 aa25.07■■□□□ 1.6
Nup98-201ENSMUST00000070165 Abcc8B2RUS7 1588 aa24.67■■□□□ 1.54
Nup98-201ENSMUST00000070165 Rhox8Q6VSS7 320 aa23.71■■□□□ 1.39
Nup98-201ENSMUST00000070165 ScribQ80U72 1612 aa23.15■■□□□ 1.3
Nup98-201ENSMUST00000070165 Dcaf1Q80TR8 1506 aa22.95■■□□□ 1.26
Nup98-201ENSMUST00000070165 Rtl1Q7M732 1744 aa22.83■■□□□ 1.24
Nup98-201ENSMUST00000070165 Kdm5dQ62240 1548 aa22.7■■□□□ 1.22
Nup98-201ENSMUST00000070165 Rb1cc1Q9ESK9 1588 aa22.65■■□□□ 1.22
Nup98-201ENSMUST00000070165 NacadQ5SWP3 1504 aa22.63■■□□□ 1.21
Nup98-201ENSMUST00000070165 Baz1aO88379 1555 aa22.37■■□□□ 1.17
Nup98-201ENSMUST00000070165 Ccdc180J3QNE4 1664 aa22.34■■□□□ 1.17
Nup98-201ENSMUST00000070165 Sycp2Q9CUU3 1500 aa22.12■■□□□ 1.13
Nup98-201ENSMUST00000070165 Crybg2B7ZCC2 1516 aa22.05■■□□□ 1.12
Nup98-201ENSMUST00000070165 Zcchc6Q5BLK4 1491 aaKnown RBP22.04■■□□□ 1.12
Nup98-201ENSMUST00000070165 Ccdc136Q3TVA9 1136 aa21.99■■□□□ 1.11
Nup98-201ENSMUST00000070165 Smarca2Q6DIC0 1577 aa21.79■■□□□ 1.08
Nup98-201ENSMUST00000070165 Trim41Q5NCC3 630 aa21.62■■□□□ 1.05
Nup98-201ENSMUST00000070165 BicraF8VPZ9 1578 aa21.61■■□□□ 1.05
Nup98-201ENSMUST00000070165 HrcG5E8J6 738 aa21.39■■□□□ 1.02
Nup98-201ENSMUST00000070165 Cecr2E9Q2Z1 1453 aa21.39■■□□□ 1.01
Nup98-201ENSMUST00000070165 Brd4Q9ESU6 1400 aaKnown RBP21.36■■□□□ 1.01
Nup98-201ENSMUST00000070165 Synj1Q8CHC4 1574 aa21.13■□□□□ 0.97
Nup98-201ENSMUST00000070165 Cngb1E1AZ71 1325 aa21.11■□□□□ 0.97
Nup98-201ENSMUST00000070165 Smarca4Q3TKT4 1613 aaKnown RBP21.09■□□□□ 0.97
Nup98-201ENSMUST00000070165 CftrP26361 1476 aa21.07■□□□□ 0.96
Nup98-201ENSMUST00000070165 Esf1Q3V1V3 845 aaKnown RBP21.07■□□□□ 0.96
Nup98-201ENSMUST00000070165 Cttnbp2B9EJA2 1648 aa20.98■□□□□ 0.95
Nup98-201ENSMUST00000070165 Golga3P55937 1487 aa20.96■□□□□ 0.95
Nup98-201ENSMUST00000070165 Pds5bQ4VA53 1446 aaKnown RBP20.9■□□□□ 0.94
Nup98-201ENSMUST00000070165 Atad2bE9Q166 1460 aaKnown RBP20.88■□□□□ 0.93
Nup98-201ENSMUST00000070165 Cep164Q5DU05 1446 aa20.87■□□□□ 0.93
Nup98-201ENSMUST00000070165 Iqgap2Q3UQ44 1575 aa20.85■□□□□ 0.93
Nup98-201ENSMUST00000070165 Chic1Q8CBW7 227 aa20.75■□□□□ 0.91
Nup98-201ENSMUST00000070165 Rsf1E9PWW9 1441 aaKnown RBP20.75■□□□□ 0.91
Nup98-201ENSMUST00000070165 Top2bQ64511 1612 aa20.69■□□□□ 0.9
Nup98-201ENSMUST00000070165 Ccdc88bQ4QRL3 1481 aa20.68■□□□□ 0.9
Nup98-201ENSMUST00000070165 Gab3Q8BSM5 595 aa20.6■□□□□ 0.89
Nup98-201ENSMUST00000070165 Ercc6F8VPZ5 1481 aa20.53■□□□□ 0.88
Nup98-201ENSMUST00000070165 Cc2d2aQ8CFW7 1633 aa20.51■□□□□ 0.87
Nup98-201ENSMUST00000070165 Fmn1Q05860 1466 aa20.49■□□□□ 0.87
Nup98-201ENSMUST00000070165 Frmpd1A2AKB4 1549 aa20.48■□□□□ 0.87
Nup98-201ENSMUST00000070165 Wdr62Q3U3T8 1523 aa20.47■□□□□ 0.87
Nup98-201ENSMUST00000070165 Ehmt2Q9Z148 1263 aaKnown RBP20.44■□□□□ 0.86
Nup98-201ENSMUST00000070165 Top2aQ01320 1528 aaKnown RBP20.27■□□□□ 0.84
Nup98-201ENSMUST00000070165 Kif15Q6P9L6 1387 aa20.22■□□□□ 0.83
Nup98-201ENSMUST00000070165 Thoc2B1AZI6 1594 aaKnown RBP20.22■□□□□ 0.83
Nup98-201ENSMUST00000070165 Rpgrip1Q9EPQ2 1331 aa20.21■□□□□ 0.83
Nup98-201ENSMUST00000070165 TnnQ80Z71 1560 aa20.2■□□□□ 0.82
Nup98-201ENSMUST00000070165 Phldb1Q6PDH0 1371 aaKnown RBP20.19■□□□□ 0.82
Nup98-201ENSMUST00000070165 Lamc3Q9R0B6 1581 aa20.17■□□□□ 0.82
Nup98-201ENSMUST00000070165 Unc13aQ4KUS2 1712 aa20.16■□□□□ 0.82
Nup98-201ENSMUST00000070165 Npm2Q80W85 207 aa20.13■□□□□ 0.81
Nup98-201ENSMUST00000070165 Acin1Q9JIX8 1338 aaKnown RBP20.13■□□□□ 0.81
Nup98-201ENSMUST00000070165 Il27Q8K3I6 234 aa20.13■□□□□ 0.81
Nup98-201ENSMUST00000070165 Rapgef2Q8CHG7 1496 aa20.11■□□□□ 0.81
Nup98-201ENSMUST00000070165 Ubl4bQ9CQ84 188 aa20.1■□□□□ 0.81
Nup98-201ENSMUST00000070165 Myt1lP97500 1187 aa20.01■□□□□ 0.79
Nup98-201ENSMUST00000070165 Ccdc18Q640L5 1455 aa20.01■□□□□ 0.79
Nup98-201ENSMUST00000070165 Cep162Q6ZQ06 1403 aa19.99■□□□□ 0.79
Nup98-201ENSMUST00000070165 Fam135aQ6NS59 1506 aa19.99■□□□□ 0.79
Nup98-201ENSMUST00000070165 Camsap1A2AHC3 1581 aa19.96■□□□□ 0.79
Nup98-201ENSMUST00000070165 Cux2P70298 1426 aa19.95■□□□□ 0.78
Nup98-201ENSMUST00000070165 Npm1Q61937 292 aaKnown RBP19.93■□□□□ 0.78
Nup98-201ENSMUST00000070165 NrkQ9R0G8 1455 aa19.84■□□□□ 0.77
Nup98-201ENSMUST00000070165 PtprkP35822 1457 aa19.82■□□□□ 0.76
Nup98-201ENSMUST00000070165 Zeb1Q64318 1117 aa19.81■□□□□ 0.76
Nup98-201ENSMUST00000070165 Grin2bQ01097 1482 aa19.81■□□□□ 0.76
Nup98-201ENSMUST00000070165 Shroom4Q1W617 1475 aa19.81■□□□□ 0.76
Nup98-201ENSMUST00000070165 Eif4g1Q6NZJ6 1600 aaKnown RBP19.75■□□□□ 0.75
Nup98-201ENSMUST00000070165 Arhgap35Q91YM2 1499 aa19.74■□□□□ 0.75
Nup98-201ENSMUST00000070165 LrpprcQ6PB66 1392 aaKnown RBP19.73■□□□□ 0.75
Nup98-201ENSMUST00000070165 Dnajc5bQ9CQ94 199 aa19.72■□□□□ 0.75
Nup98-201ENSMUST00000070165 Baz1bQ9Z277 1479 aa19.7■□□□□ 0.74
Nup98-201ENSMUST00000070165 Clip1Q922J3 1391 aa19.68■□□□□ 0.74
Nup98-201ENSMUST00000070165 Efcab5A0JP43 1406 aa19.65■□□□□ 0.74
Nup98-201ENSMUST00000070165 PogzQ8BZH4 1409 aaKnown RBP19.64■□□□□ 0.74
Nup98-201ENSMUST00000070165 Map3k1P53349 1493 aa19.64■□□□□ 0.73
Nup98-201ENSMUST00000070165 Mrc2Q64449 1479 aa19.63■□□□□ 0.73
Nup98-201ENSMUST00000070165 Duox2A2AQ99 1517 aa19.61■□□□□ 0.73
Nup98-201ENSMUST00000070165 UbtfP25976 765 aaKnown RBP19.6■□□□□ 0.73
Nup98-201ENSMUST00000070165 Mroh2bQ7M6Y6 1581 aa19.6■□□□□ 0.73
Nup98-201ENSMUST00000070165 Dhx29Q6PGC1 1365 aaKnown RBP19.59■□□□□ 0.73
Nup98-201ENSMUST00000070165 Eea1Q8BL66 1411 aa19.57■□□□□ 0.72
Nup98-201ENSMUST00000070165 Mier1Q5UAK0 511 aa19.53■□□□□ 0.72
Nup98-201ENSMUST00000070165 Setd5Q5XJV7 1441 aa19.52■□□□□ 0.72
Nup98-201ENSMUST00000070165 Plekhg3Q4VAC9 1341 aa19.5■□□□□ 0.71
Nup98-201ENSMUST00000070165 Ap3b1Q9Z1T1 1105 aa19.48■□□□□ 0.71
Nup98-201ENSMUST00000070165 AqrQ8CFQ3 1481 aaKnown RBP19.47■□□□□ 0.71
Nup98-201ENSMUST00000070165 Kif21aQ9QXL2 1672 aa19.47■□□□□ 0.71
Nup98-201ENSMUST00000070165 Carmil1Q6EDY6 1374 aa19.46■□□□□ 0.71
Nup98-201ENSMUST00000070165 Crocc2F6XLV1 1638 aa19.45■□□□□ 0.7
Nup98-201ENSMUST00000070165 Samd9lQ69Z37 1561 aa19.41■□□□□ 0.7
Nup98-201ENSMUST00000070165 Arap1Q4LDD4 1452 aa19.41■□□□□ 0.7
Nup98-201ENSMUST00000070165 SynmQ70IV5 1561 aa19.39■□□□□ 0.69
Nup98-201ENSMUST00000070165 NefmP08553 848 aa19.39■□□□□ 0.69
Nup98-201ENSMUST00000070165 Rad54l2Q99NG0 1466 aa19.36■□□□□ 0.69
Nup98-201ENSMUST00000070165 Arhgef5E9Q7D5 1581 aa19.35■□□□□ 0.69
Nup98-201ENSMUST00000070165 Ankrd26Q811D2 1581 aa19.33■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 147.8 ms