RNA–Protein interactions for RNA: ENSMUST00000055131.12

Usp48-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 48, mousemouse

TSL 1 (best) BASIC

Gene Usp48, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp48-201ENSMUST00000055131 Plekhh1Q80TI1 1356 aa20.97■□□□□ 0.95
Usp48-201ENSMUST00000055131 Stk11ipQ3TAA7 1072 aa20.97■□□□□ 0.95
Usp48-201ENSMUST00000055131 Atp2b2Q9R0K7 1198 aa20.97■□□□□ 0.95
Usp48-201ENSMUST00000055131 Mphosph10Q810V0 681 aaKnown RBP20.97■□□□□ 0.95
Usp48-201ENSMUST00000055131 IbspQ61711 324 aa20.96■□□□□ 0.95
Usp48-201ENSMUST00000055131 Rnf214Q8BFU3 668 aaKnown RBP20.95■□□□□ 0.94
Usp48-201ENSMUST00000055131 Hmgn5Q9JL35 406 aa20.95■□□□□ 0.94
Usp48-201ENSMUST00000055131 Gprasp1Q5U4C1 1347 aa20.95■□□□□ 0.94
Usp48-201ENSMUST00000055131 NexnQ7TPW1 607 aa20.95■□□□□ 0.94
Usp48-201ENSMUST00000055131 Hook1Q8BIL5 728 aa20.94■□□□□ 0.94
Usp48-201ENSMUST00000055131 PnisrA2AJT4 805 aaKnown RBP20.94■□□□□ 0.94
Usp48-201ENSMUST00000055131 Ccdc34Q3UI66 367 aa20.93■□□□□ 0.94
Usp48-201ENSMUST00000055131 Znf710Q3U288 666 aa20.93■□□□□ 0.94
Usp48-201ENSMUST00000055131 Ppp2r1aQ76MZ3 589 aa20.93■□□□□ 0.94
Usp48-201ENSMUST00000055131 Cc2d2aQ8CFW7 1633 aa20.92■□□□□ 0.94
Usp48-201ENSMUST00000055131 Me1P06801 572 aa20.91■□□□□ 0.94
Usp48-201ENSMUST00000055131 Gtf2f1Q3THK3 508 aaKnown RBP20.91■□□□□ 0.94
Usp48-201ENSMUST00000055131 TatQ8QZR1 454 aa20.91■□□□□ 0.94
Usp48-201ENSMUST00000055131 Ppp2r3aB2RXC8 1150 aa20.91■□□□□ 0.94
Usp48-201ENSMUST00000055131 Slc4a2P13808 1237 aaKnown RBP20.91■□□□□ 0.94
Usp48-201ENSMUST00000055131 Eva1cP58659 440 aa20.91■□□□□ 0.94
Usp48-201ENSMUST00000055131 SkilQ60665 675 aa20.91■□□□□ 0.94
Usp48-201ENSMUST00000055131 Ipo4Q8VI75 1082 aa20.91■□□□□ 0.94
Usp48-201ENSMUST00000055131 Cchcr1Q8K2I2 770 aa20.9■□□□□ 0.94
Usp48-201ENSMUST00000055131 Vps8Q0P5W1 1427 aa20.9■□□□□ 0.94
Usp48-201ENSMUST00000055131 Gm10471E9Q1C7 252 aa20.9■□□□□ 0.94
Usp48-201ENSMUST00000055131 March6Q6ZQ89 909 aa20.89■□□□□ 0.94
Usp48-201ENSMUST00000055131 Cfap99A0A140LIX9 648 aa20.89■□□□□ 0.94
Usp48-201ENSMUST00000055131 FanciQ8K368 1330 aa20.89■□□□□ 0.93
Usp48-201ENSMUST00000055131 Apaf1O88879 1249 aa20.89■□□□□ 0.93
Usp48-201ENSMUST00000055131 Ncbp3Q8BZR9 615 aaKnown RBP20.89■□□□□ 0.93
Usp48-201ENSMUST00000055131 Zfp444Q3TDV8 331 aaKnown RBP20.88■□□□□ 0.93
Usp48-201ENSMUST00000055131 Ift140E9PY46 1464 aa20.88■□□□□ 0.93
Usp48-201ENSMUST00000055131 Znhit6Q3UFB2 460 aaKnown RBP20.88■□□□□ 0.93
Usp48-201ENSMUST00000055131 Ints3Q7TPD0 1041 aaKnown RBP20.88■□□□□ 0.93
Usp48-201ENSMUST00000055131 MpripP97434 1024 aa20.87■□□□□ 0.93
Usp48-201ENSMUST00000055131 Tnpo1Q8BFY9 898 aaKnown RBP20.87■□□□□ 0.93
Usp48-201ENSMUST00000055131 Ccdc173A0JLY1 547 aa20.87■□□□□ 0.93
Usp48-201ENSMUST00000055131 Ccdc171E9Q1U1 1324 aa20.87■□□□□ 0.93
Usp48-201ENSMUST00000055131 Psma5Q9Z2U1 241 aaKnown RBP20.87■□□□□ 0.93
Usp48-201ENSMUST00000055131 Zpr1Q62384 459 aa20.86■□□□□ 0.93
Usp48-201ENSMUST00000055131 Duox2A2AQ99 1517 aa20.85■□□□□ 0.93
Usp48-201ENSMUST00000055131 Abl1P00520 1123 aa20.85■□□□□ 0.93
Usp48-201ENSMUST00000055131 Ubxn4Q8VCH8 506 aa20.85■□□□□ 0.93
Usp48-201ENSMUST00000055131 Gcom1E9PZ54 550 aa20.85■□□□□ 0.93
Usp48-201ENSMUST00000055131 MyzapQ3UIJ9 466 aa20.85■□□□□ 0.93
Usp48-201ENSMUST00000055131 Map3k5O35099 1380 aa20.85■□□□□ 0.93
Usp48-201ENSMUST00000055131 Babam1Q3UI43 333 aa20.85■□□□□ 0.93
Usp48-201ENSMUST00000055131 Rab3gap2Q8BMG7 1366 aa20.84■□□□□ 0.93
Usp48-201ENSMUST00000055131 Zkscan2G3X952 960 aa20.84■□□□□ 0.93
Usp48-201ENSMUST00000055131 Cd109Q8R422 1442 aa20.84■□□□□ 0.93
Usp48-201ENSMUST00000055131 Pnmal2G3X9N3 661 aa20.84■□□□□ 0.93
Usp48-201ENSMUST00000055131 Kif3aP28741 701 aa20.84■□□□□ 0.93
Usp48-201ENSMUST00000055131 Fnbp4Q6ZQ03 1031 aa20.84■□□□□ 0.93
Usp48-201ENSMUST00000055131 Mcm2P97310 904 aa20.83■□□□□ 0.93
Usp48-201ENSMUST00000055131 Sytl4Q9R0Q1 673 aa20.83■□□□□ 0.93
Usp48-201ENSMUST00000055131 Efcab5A0JP43 1406 aa20.83■□□□□ 0.93
Usp48-201ENSMUST00000055131 Trim29Q8R2Q0 587 aa20.83■□□□□ 0.93
Usp48-201ENSMUST00000055131 Sirt1Q923E4 737 aa20.83■□□□□ 0.92
Usp48-201ENSMUST00000055131 Cavin4A2AMM0 362 aa20.83■□□□□ 0.92
Usp48-201ENSMUST00000055131 Hdgfl1Q2VPR5 283 aa20.82■□□□□ 0.92
Usp48-201ENSMUST00000055131 Prdm16A2A935 1275 aa20.82■□□□□ 0.92
Usp48-201ENSMUST00000055131 EzrP26040 586 aaKnown RBP20.82■□□□□ 0.92
Usp48-201ENSMUST00000055131 Prm3Q62100 101 aa20.82■□□□□ 0.92
Usp48-201ENSMUST00000055131 Atf3Q60765 181 aa20.81■□□□□ 0.92
Usp48-201ENSMUST00000055131 Fkbp4P30416 458 aa20.81■□□□□ 0.92
Usp48-201ENSMUST00000055131 Zrsr2Q62377 462 aaKnown RBP20.8■□□□□ 0.92
Usp48-201ENSMUST00000055131 Rufy1Q8BIJ7 712 aa20.8■□□□□ 0.92
Usp48-201ENSMUST00000055131 Cnnm1Q0GA42 951 aa20.8■□□□□ 0.92
Usp48-201ENSMUST00000055131 Cabp2Q9JLK4 216 aa20.8■□□□□ 0.92
Usp48-201ENSMUST00000055131 1700010I14RikQ7TPG0 532 aa20.8■□□□□ 0.92
Usp48-201ENSMUST00000055131 Zranb3Q6NZP1 1069 aa20.79■□□□□ 0.92
Usp48-201ENSMUST00000055131 NaspQ99MD9 773 aaKnown RBP20.79■□□□□ 0.92
Usp48-201ENSMUST00000055131 Rbm28Q8CGC6 750 aaKnown RBP20.79■□□□□ 0.92
Usp48-201ENSMUST00000055131 Arhgap5P97393 1501 aa20.79■□□□□ 0.92
Usp48-201ENSMUST00000055131 HypkQ9CR41 129 aa20.79■□□□□ 0.92
Usp48-201ENSMUST00000055131 AnlnQ8K298 1121 aaKnown RBP20.78■□□□□ 0.92
Usp48-201ENSMUST00000055131 UvssaQ9D479 717 aa20.78■□□□□ 0.92
Usp48-201ENSMUST00000055131 Nap1l1P28656 391 aaKnown RBP20.78■□□□□ 0.92
Usp48-201ENSMUST00000055131 Mrc2Q64449 1479 aa20.78■□□□□ 0.92
Usp48-201ENSMUST00000055131 Znf704Q9ERQ3 566 aa20.78■□□□□ 0.92
Usp48-201ENSMUST00000055131 Tmc1Q8R4P5 757 aa20.77■□□□□ 0.92
Usp48-201ENSMUST00000055131 Top2aQ01320 1528 aaKnown RBP20.77■□□□□ 0.92
Usp48-201ENSMUST00000055131 Gnai2P08752 355 aaKnown RBP20.77■□□□□ 0.91
Usp48-201ENSMUST00000055131 TefQ9JLC6 301 aa20.77■□□□□ 0.91
Usp48-201ENSMUST00000055131 Agtpbp1Q641K1 1218 aa20.76■□□□□ 0.91
Usp48-201ENSMUST00000055131 Paf1Q8K2T8 535 aa20.76■□□□□ 0.91
Usp48-201ENSMUST00000055131 Nphp1Q9QY53 687 aa20.76■□□□□ 0.91
Usp48-201ENSMUST00000055131 Polr1aO35134 1717 aaKnown RBP20.76■□□□□ 0.91
Usp48-201ENSMUST00000055131 Gnl3lQ6PGG6 577 aaKnown RBP20.76■□□□□ 0.91
Usp48-201ENSMUST00000055131 Arhgap31A6X8Z5 1425 aa20.76■□□□□ 0.91
Usp48-201ENSMUST00000055131 Fmnl2A2APV2 1086 aa20.75■□□□□ 0.91
Usp48-201ENSMUST00000055131 Sycp1Q62209 993 aa20.75■□□□□ 0.91
Usp48-201ENSMUST00000055131 Necab1Q8BG18 352 aa20.75■□□□□ 0.91
Usp48-201ENSMUST00000055131 Kcnh8P59111 1102 aa20.75■□□□□ 0.91
Usp48-201ENSMUST00000055131 Smg7Q5RJH6 1138 aaKnown RBP20.75■□□□□ 0.91
Usp48-201ENSMUST00000055131 Naip1Q9QWK5 1403 aa20.74■□□□□ 0.91
Usp48-201ENSMUST00000055131 Cog6Q8R3I3 657 aa20.73■□□□□ 0.91
Usp48-201ENSMUST00000055131 Myom3A2ABU4 1439 aa20.73■□□□□ 0.91
Usp48-201ENSMUST00000055131 Plcd4Q8K3R3 807 aa20.73■□□□□ 0.91
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms