RNA–Protein interactions for RNA: ENSMUST00000050178.12

Ccdc60-201, Transcript of Coiled-coil domain-containing protein 60, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc60, Length 3,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-201ENSMUST00000050178 TnikP83510 1323 aa10.85□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Tmf1B9EKI3 1091 aa10.85□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Pank3Q8R2W9 370 aa10.84□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Ttbk1Q6PCN3 1308 aa10.84□□□□□ -0.67
Ccdc60-201ENSMUST00000050178 Rpgrip1lQ8CG73 1264 aa10.83□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 N4bp2F8VQG7 1678 aaKnown RBP10.83□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 NalcnQ8BXR5 1738 aa10.82□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Rims2Q9EQZ7 1530 aa10.82□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Erbb3Q61526 1339 aa10.82□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Usp19Q3UJD6 1360 aa10.82□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Tnrc6bQ8BKI2 1810 aaKnown RBP10.82□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Fam184bQ0KK56 942 aa10.81□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Ncbp3Q8BZR9 615 aaKnown RBP10.81□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Scaf11E9PZM7 1456 aaKnown RBP10.81□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 D430041D05RikF6ZGR6 1678 aa10.8□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Inpp5dQ9ES52 1191 aa10.8□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Zscan21Q07231 555 aa10.79□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Fam135bQ9DAI6 1403 aa10.79□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Usp40Q8BWR4 1235 aa10.79□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Mon2Q80TL7 1715 aa10.79□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Kiaa1107Q80TK0 1369 aa10.79□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Ppp2r1aQ76MZ3 589 aa10.79□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Puf60Q3UEB3 564 aaKnown RBP10.78□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Ltbp4Q8K4G1 1666 aa10.78□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 L3mbtl2P59178 703 aa10.78□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Zmym3Q9JLM4 1370 aa10.78□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Als2Q920R0 1651 aa10.78□□□□□ -0.68
Ccdc60-201ENSMUST00000050178 Gtf2e1Q9D0D5 440 aa10.77□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Marf1Q8BJ34 1730 aaKnown RBP10.76□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Scn7aB1AYL1 1681 aa10.76□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Q7TT23 1179 aa10.76□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 IbtkQ6ZPR6 1352 aaKnown RBP10.75□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Scn4aQ9ER60 1841 aa10.75□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 C5P06684 1680 aa10.75□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Mak16Q8BGS0 296 aaKnown RBP10.75□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Gm20521D3Z5F7 333 aa10.74□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Slc4a1apE9PX68 744 aa10.74□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Kif20bQ80WE4 1774 aaKnown RBP10.74□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Zfp444Q3TDV8 331 aaKnown RBP10.74□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Zbtb7cQ8VCZ7 619 aa10.74□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Ifnlr1Q8CGK5 535 aa10.73□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Tet3Q8BG87 1668 aa10.73□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Srpk2O54781 681 aaKnown RBP10.73□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Calr4Q3TQS0 420 aa10.73□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Fan1Q69ZT1 1020 aa10.73□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Wnk3Q80XP9 1757 aa10.72□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Stk24Q99KH8 431 aa10.72□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Ubr1O70481 1757 aa10.72□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 NrdcQ8BHG1 1161 aa10.72□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 SafbD3YXK2 937 aaKnown RBP10.71□□□□□ -0.69
Ccdc60-201ENSMUST00000050178 Nrxn3Q6P9K9 1571 aa10.71□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Uhrf1bp1B2KF50 1429 aa10.71□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Pik3r4Q8VD65 1358 aa10.7□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Ofd1Q80Z25 1017 aa10.7□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Gli3Q61602 1583 aa10.7□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 PtpruB1AUH1 1446 aa10.69□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Map4k4P97820 1233 aaKnown RBP10.69□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Col18a1P39061 1774 aa10.69□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 P2rx7Q9Z1M0 595 aa10.69□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Kif7B7ZNG0 1348 aa10.68□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Myo5bP21271 1818 aa10.68□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Kdm2aP59997 1161 aa10.68□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 CenpjQ569L8 1344 aa10.68□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Pik3c2aQ61194 1686 aa10.67□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Kif16bB1AVY7 1312 aa10.66□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Uspl1Q3ULM6 1089 aa10.66□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 PtprvP70289 1705 aa10.66□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Rreb1Q3UH06 1700 aaKnown RBP10.66□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Chd4Q6PDQ2 1915 aaKnown RBP10.66□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Anp32bQ9EST5 272 aaKnown RBP10.66□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Erich6D3Z6S9 713 aa10.65□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Ppp1r18Q8BQ30 594 aa10.65□□□□□ -0.7
Ccdc60-201ENSMUST00000050178 Map2P20357 1828 aa10.65□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Plekhh1Q80TI1 1356 aa10.64□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Robo1O89026 1612 aa10.64□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Slit2Q9R1B9 1521 aa10.64□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Upf2A2AT37 1269 aaKnown RBP10.64□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Col16a1Q8BLX7 1580 aa10.64□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Atp7bQ64446 1462 aa10.63□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Znf521Q6KAS7 1311 aa10.63□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Sirt1Q923E4 737 aa10.63□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Cald1E9QA15 768 aaKnown RBP10.62□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Afap1Q80YS6 731 aa10.62□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 IghaA0A0A6YXW6 389 aa10.62□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Ptpn23Q6PB44 1692 aa10.61□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Trpm3Q5F4S9 1721 aa10.61□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 CenpbP27790 599 aa10.61□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Prkrip1Q9CWV6 186 aaKnown RBP10.61□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Camta1A2A891 1682 aa10.6□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Esx1O88933 382 aa10.6□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Kdm2bQ6P1G2 1309 aa10.59□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Anp32aO35381 247 aa10.59□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Liat1Q810M6 228 aa10.59□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Abcc10Q8R4P9 1501 aa10.59□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Trim28Q62318 834 aa10.59□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 IqubQ8CDK3 788 aa10.59□□□□□ -0.71
Ccdc60-201ENSMUST00000050178 Nolc1E9Q5C9 702 aaKnown RBP10.58□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 Adgrb1Q3UHD1 1582 aa10.58□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 Dcaf11Q91VU6 549 aa10.58□□□□□ -0.72
Ccdc60-201ENSMUST00000050178 Dnajc5gQ8C632 165 aa10.58□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 15.8 ms