RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Cspp1B2RX88 1205 aa12.29□□□□□ -0.44
Ldlr-201ENSMUST00000034713 Cdk19Q8BWD8 501 aa12.29□□□□□ -0.44
Ldlr-201ENSMUST00000034713 HnrnpmQ9D0E1 729 aaKnown RBP12.28□□□□□ -0.44
Ldlr-201ENSMUST00000034713 Plekhh1Q80TI1 1356 aa12.28□□□□□ -0.44
Ldlr-201ENSMUST00000034713 SlkO54988 1233 aa12.28□□□□□ -0.44
Ldlr-201ENSMUST00000034713 Arid3aQ62431 601 aa12.28□□□□□ -0.44
Ldlr-201ENSMUST00000034713 Adgrb2Q8CGM1 1561 aa12.27□□□□□ -0.44
Ldlr-201ENSMUST00000034713 Q8BT18 775 aa12.27□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Dennd4bQ3U1Y4 1499 aa12.27□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Ttll13A4Q9F6 804 aa12.26□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Cald1E9QA15 768 aaKnown RBP12.26□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Pak3Q61036 559 aa12.26□□□□□ -0.45
Ldlr-201ENSMUST00000034713 R3hcc1Q8BSI6 488 aa12.26□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Gcc2Q8CHG3 1679 aa12.26□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Eif4g2Q62448 906 aaKnown RBP12.26□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Rpgrip1lQ8CG73 1264 aa12.26□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Esx1O88933 382 aa12.25□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Znf330Q922H9 316 aa12.25□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Evi5lH3BKQ3 813 aa12.25□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Pcmtd1P59913 357 aa12.25□□□□□ -0.45
Ldlr-201ENSMUST00000034713 GorabQ8BRM2 368 aa12.25□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Eif2s2Q99L45 331 aaKnown RBP12.25□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Casq1O09165 405 aa12.24□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Bcl11bQ99PV8 884 aa12.24□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Rab3gap2Q8BMG7 1366 aa12.24□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Lrrc9Q8CDN9 1456 aa12.24□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Isy1Q69ZQ2 285 aaKnown RBP12.24□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Ccdc30Q8BVF4 654 aa12.23□□□□□ -0.45
Ldlr-201ENSMUST00000034713 TatQ8QZR1 454 aa12.23□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Gli2Q0VGT2 1544 aa12.23□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Synj2Q9D2G5 1434 aa12.23□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Ccdc183A2AJB1 534 aa12.23□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Ppp2r1aQ76MZ3 589 aa12.23□□□□□ -0.45
Ldlr-201ENSMUST00000034713 NpatQ8BMA5 1420 aa12.22□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Cep170Q6A065 1588 aa12.22□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Fmn2Q9JL04 1578 aa12.22□□□□□ -0.45
Ldlr-201ENSMUST00000034713 St18Q80TY4 1045 aa12.22□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Kiaa1551Q5DTW7 1521 aa12.21□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Gimap6Q8K349 305 aa12.21□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Sirt1Q923E4 737 aa12.21□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Gsdma3Q5Y4Y6 464 aa12.21□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Cetn4Q8K4K1 168 aa12.21□□□□□ -0.45
Ldlr-201ENSMUST00000034713 Talpid3E9PV87 1520 aa12.21□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Q3UJC8 639 aa12.21□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Gprasp1Q5U4C1 1347 aa12.21□□□□□ -0.46
Ldlr-201ENSMUST00000034713 PtprgQ05909 1442 aa12.2□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Tnnt1O88346 262 aa12.2□□□□□ -0.46
Ldlr-201ENSMUST00000034713 G3bp1P97855 465 aaKnown RBP12.2□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Dnmt1P13864 1620 aaKnown RBP12.2□□□□□ -0.46
Ldlr-201ENSMUST00000034713 PrxO55103 1391 aa12.2□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Ccdc60Q8C4J0 545 aa12.2□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Znf518aB2RRF6 1478 aaKnown RBP12.19□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Zfp444Q3TDV8 331 aaKnown RBP12.19□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Iffo2Q8R2V2 512 aa12.18□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Sh3bp5Q9Z131 463 aa12.18□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Trim30aP15533 496 aa12.18□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Taok2Q6ZQ29 1240 aa12.18□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Rrp9Q91WM3 475 aaKnown RBP12.18□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Rtn4Q99P72 1162 aaKnown RBP12.18□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Kiaa0754Q69ZZ9 979 aa12.18□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Filip1lQ6P6L0 1131 aa12.18□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Q7TT23 1179 aa12.18□□□□□ -0.46
Ldlr-201ENSMUST00000034713 IbtkQ6ZPR6 1352 aaKnown RBP12.18□□□□□ -0.46
Ldlr-201ENSMUST00000034713 PtprtQ99M80 1454 aa12.17□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Pibf1E9Q6K3 756 aa12.17□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Ptch1Q61115 1434 aa12.17□□□□□ -0.46
Ldlr-201ENSMUST00000034713 SphkapQ6NSW3 1687 aa12.17□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Chmp7Q8R1T1 451 aa12.17□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Camsap2Q8C1B1 1461 aa12.17□□□□□ -0.46
Ldlr-201ENSMUST00000034713 MecomP14404 1042 aa12.16□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Phf14Q9D4H9 881 aa12.16□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Map7d2A2AG50 781 aa12.16□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Fmnl2A2APV2 1086 aa12.16□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Fam208aQ69ZR9 1610 aaKnown RBP12.16□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Swt1Q9DBQ9 907 aa12.16□□□□□ -0.46
Ldlr-201ENSMUST00000034713 CgnP59242 1191 aa12.15□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Dennd6aQ8BH65 605 aa12.15□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Supt6hQ62383 1726 aaKnown RBP12.15□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Ncoa1P70365 1447 aa12.15□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Ccdc146E9Q9F7 977 aa12.15□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Ppp2r3aB2RXC8 1150 aa12.15□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Znf608Q56A10 1511 aa12.15□□□□□ -0.46
Ldlr-201ENSMUST00000034713 Ccdc173A0JLY1 547 aa12.14□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Rassf8Q8CJ96 419 aa12.14□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Gnai1B2RSH2 354 aa12.14□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Tpm2P58774 284 aa12.14□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Gnai3Q9DC51 354 aa12.14□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Ipo4Q8VI75 1082 aa12.14□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Sf3a1Q8K4Z5 791 aaKnown RBP12.13□□□□□ -0.47
Ldlr-201ENSMUST00000034713 KinQ8K339 391 aa12.13□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Gm10563F6WIE4 79 aa12.13□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Kif4P33174 1231 aa12.13□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Mast1Q9R1L5 1570 aa12.13□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Mcm2P97310 904 aa12.12□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Gripap1Q8VD04 806 aa12.12□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Gtf2a1Q99PM3 378 aa12.12□□□□□ -0.47
Ldlr-201ENSMUST00000034713 KarsQ99MN1 595 aaKnown RBP12.12□□□□□ -0.47
Ldlr-201ENSMUST00000034713 HypkQ9CR41 129 aa12.12□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Plcd4Q8K3R3 807 aa12.12□□□□□ -0.47
Ldlr-201ENSMUST00000034713 Ccdc171E9Q1U1 1324 aa12.12□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 22.8 ms