RNA–Protein interactions for RNA: ENSMUST00000001547.7

Col1a1-201, Transcript of Collagen alpha-1(I) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col1a1, Length 5,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1-201ENSMUST00000001547 Q8C5K5 320 aa17.07■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Rnf20Q5DTM8 973 aa17.06■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Apaf1O88879 1249 aa17.06■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Bcl2l13P59017 434 aa17.06■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Erc2Q6PH08 957 aa17.05■□□□□ 0.32
Col1a1-201ENSMUST00000001547 AqrQ8CFQ3 1481 aaKnown RBP17.05■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Cplx2P84086 134 aa17.05■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Gm10471E9Q1C7 252 aa17.05■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Srek1Q8BZX4 494 aaKnown RBP17.05■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Ccdc183A2AJB1 534 aa17.04■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Samd1D3YXK1 519 aa17.04■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Sh3bgrQ9WUZ7 214 aa17.04■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Gm21969J3QJZ1 289 aa17.04■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Afap1Q80YS6 731 aa17.04■□□□□ 0.32
Col1a1-201ENSMUST00000001547 PhaxQ9JJT9 385 aaKnown RBP17.04■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Cyp46a1Q9WVK8 500 aa17.04■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Ttll13A4Q9F6 804 aa17.03■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Tpm1P58771 284 aa17.03■□□□□ 0.32
Col1a1-201ENSMUST00000001547 MpripP97434 1024 aa17.03■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Cdk19Q8BWD8 501 aa17.03■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Crocc2F6XLV1 1638 aa17.03■□□□□ 0.32
Col1a1-201ENSMUST00000001547 NexmifQ5DTT1 1515 aa17.03■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Sirt1Q923E4 737 aa17.03■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Zpr1Q62384 459 aa17.03■□□□□ 0.32
Col1a1-201ENSMUST00000001547 TchhA0A0B4J1F9 1599 aa17.03■□□□□ 0.32
Col1a1-201ENSMUST00000001547 IbspQ61711 324 aa17.03■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Kri1Q8VDQ9 704 aaKnown RBP17.03■□□□□ 0.32
Col1a1-201ENSMUST00000001547 HypkQ9CR41 129 aa17.03■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Wdr62Q3U3T8 1523 aa17.03■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Nek4Q9Z1J2 792 aa17.02■□□□□ 0.32
Col1a1-201ENSMUST00000001547 NexnQ7TPW1 607 aa17.02■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Pcf11G3X9Z4 1553 aa17.02■□□□□ 0.32
Col1a1-201ENSMUST00000001547 Tpm4Q6IRU2 248 aa17.02■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Mphosph10Q810V0 681 aaKnown RBP17.02■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Pip4k2bQ80XI4 416 aa17.02■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Fam193aQ8CGI1 1231 aaKnown RBP17.02■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Mug1P28665 1476 aa17.01■□□□□ 0.31
Col1a1-201ENSMUST00000001547 BicraF8VPZ9 1578 aa17.01■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Tpm2P58774 284 aa17.01■□□□□ 0.31
Col1a1-201ENSMUST00000001547 SkilQ60665 675 aa17.01■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Naip2Q9QUK4 1447 aa17.01■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Evc2Q8K1G2 1220 aa17.01■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Dhx16G3X8X0 1044 aaKnown RBP17.01■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Ccdc34Q3UI66 367 aa17■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Bcl11bQ99PV8 884 aa17■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Smc3Q9CW03 1217 aaKnown RBP17■□□□□ 0.31
Col1a1-201ENSMUST00000001547 SynmQ70IV5 1561 aa17■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Chmp4cQ9D7F7 232 aa17■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Ppp2r3aB2RXC8 1150 aa16.99■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Gabpb2P81069 414 aa16.99■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Mcm2P97310 904 aa16.98■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Utp3Q9JI13 469 aaKnown RBP16.98■□□□□ 0.31
Col1a1-201ENSMUST00000001547 BcanQ61361 883 aa16.98■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Cabp2Q9JLK4 216 aa16.98■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Magi1Q6RHR9 1471 aa16.98■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Kif4P33174 1231 aa16.97■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Taf3Q5HZG4 932 aa16.97■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Zranb3Q6NZP1 1069 aa16.97■□□□□ 0.31
Col1a1-201ENSMUST00000001547 A2mQ6GQT1 1474 aa16.97■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Bicd2Q921C5 820 aa16.97■□□□□ 0.31
Col1a1-201ENSMUST00000001547 CrcpO35427 148 aa16.97■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Dennd6aQ8BH65 605 aa16.96■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Krt82Q99M74 516 aa16.96■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Gripap1Q8VD04 806 aa16.96■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Ipo4Q8VI75 1082 aa16.96■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Cplx1P63040 134 aa16.96■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Ipo7Q9EPL8 1038 aaKnown RBP16.96■□□□□ 0.31
Col1a1-201ENSMUST00000001547 Lamc3Q9R0B6 1581 aa16.96■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Polr3gQ6NXY9 223 aa16.95■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Ppm1fQ8CGA0 452 aa16.95■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Dusp27Q148W8 1138 aa16.95■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Evi5lH3BKQ3 813 aa16.94■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Stk3Q9JI10 497 aa16.94■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Fmnl2A2APV2 1086 aa16.94■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Gnl3lQ6PGG6 577 aaKnown RBP16.94■□□□□ 0.3
Col1a1-201ENSMUST00000001547 TefQ9JLC6 301 aa16.94■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Abcc5Q9R1X5 1436 aa16.94■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Zkscan2G3X952 960 aa16.94■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Pknox2Q8BG99 474 aa16.94■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Neo1P97798 1493 aa16.94■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Rec8Q8C5S7 591 aa16.93■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Cchcr1Q8K2I2 770 aa16.93■□□□□ 0.3
Col1a1-201ENSMUST00000001547 PrxO55103 1391 aa16.93■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Cnnm1Q0GA42 951 aa16.92■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Zrsr2Q62377 462 aaKnown RBP16.92■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Slc52a2Q9D8F3 450 aa16.92■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Odf2A3KGV1 830 aaKnown RBP16.92■□□□□ 0.3
Col1a1-201ENSMUST00000001547 PogkQ80TC5 607 aa16.92■□□□□ 0.3
Col1a1-201ENSMUST00000001547 FosbP13346 338 aa16.92■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Fkbp4P30416 458 aa16.92■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Ncbp3Q8BZR9 615 aaKnown RBP16.92■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Gnai2P08752 355 aaKnown RBP16.92■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Eva1cP58659 440 aa16.91■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Asxl1P59598 1514 aa16.91■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Igf1rQ60751 1373 aa16.91■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Ccp110Q7TSH4 1004 aa16.91■□□□□ 0.3
Col1a1-201ENSMUST00000001547 A0A1L1SQF0 893 aa16.91■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Mad1l1Q9WTX8 717 aaKnown RBP16.91■□□□□ 0.3
Col1a1-201ENSMUST00000001547 Gimap6Q8K349 305 aa16.9■□□□□ 0.3
Col1a1-201ENSMUST00000001547 PalmQ9Z0P4 383 aa16.9■□□□□ 0.3
Retrieved 100 of 22,080 RNA–protein pairs in 18.3 ms