RNA–Protein interactions for RNA: YER029C

SMB1, Transcript of Core Sm protein Sm B, yeastyeast

Gene SMB1, Length 591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMB1YER029C DNF1P32660 1571 aa0.28□□□□□ -2.37
SMB1YER029C SPO14P36126 1683 aa0.27□□□□□ -2.37
SMB1YER029C LSM2P38203 95 aaKnown RBP0.27□□□□□ -2.37
SMB1YER029C YKL065W-AQ2V2P2 73 aa0.27□□□□□ -2.37
SMB1YER029C YIL156W-BQ2V2P4 73 aa0.27□□□□□ -2.37
SMB1YER029C YDR381C-AQ3E6R5 114 aa0.27□□□□□ -2.37
SMB1YER029C KOG1P38873 1557 aa0.27□□□□□ -2.37
SMB1YER029C IML1P47170 1584 aa0.27□□□□□ -2.37
SMB1YER029C GCN2P15442 1659 aa0.27□□□□□ -2.37
SMB1YER029C RRP5Q05022 1729 aaKnown RBP0.27□□□□□ -2.37
SMB1YER029C USO1P25386 1790 aa0.27□□□□□ -2.37
SMB1YER029C YFR009W-AP0C5M9 85 aa0.26□□□□□ -2.37
SMB1YER029C QCR9P22289 66 aa0.26□□□□□ -2.37
SMB1YER029C RPS29BP41058 56 aaKnown RBP0.26□□□□□ -2.37
SMB1YER029C YNL190WP53872 204 aa0.26□□□□□ -2.37
SMB1YER029C YOR314WQ12506 109 aa0.26□□□□□ -2.37
SMB1YER029C YPR108W-AQ3E7B3 70 aa0.26□□□□□ -2.37
SMB1YER029C YKL068W-AQ3E826 78 aa0.26□□□□□ -2.37
SMB1YER029C NUP159P40477 1460 aa0.26□□□□□ -2.37
SMB1YER029C ARO1P08566 1588 aaKnown RBP0.25□□□□□ -2.37
SMB1YER029C TCB3Q03640 1545 aaKnown RBP0.25□□□□□ -2.37
SMB1YER029C SCC2Q04002 1493 aa0.25□□□□□ -2.37
SMB1YER029C YOL097W-AQ3E7Y9 61 aa0.25□□□□□ -2.37
SMB1YER029C YHR213W-AQ8TGT4 77 aa0.25□□□□□ -2.37
SMB1YER029C TY3B-GQ99315 1547 aa0.24□□□□□ -2.37
SMB1YER029C UFD4P33202 1483 aa0.24□□□□□ -2.37
SMB1YER029C SMC4Q12267 1418 aa0.24□□□□□ -2.37
SMB1YER029C BPH1P25356 2167 aa0.24□□□□□ -2.37
SMB1YER029C YDL022C-AP0C5L6 82 aa0.24□□□□□ -2.37
SMB1YER029C YBR032WP38223 100 aa0.24□□□□□ -2.37
SMB1YER029C SWM2P40342 146 aa0.24□□□□□ -2.37
SMB1YER029C YDR119W-AQ2V2P9 66 aa0.24□□□□□ -2.37
SMB1YER029C YGR121W-AQ3E816 71 aa0.24□□□□□ -2.37
SMB1YER029C UTP20P35194 2493 aaKnown RBP0.24□□□□□ -2.37
SMB1YER029C NUP192P47054 1683 aa0.24□□□□□ -2.37
SMB1YER029C HIR3P47171 1648 aa0.24□□□□□ -2.37
SMB1YER029C ULS1Q08562 1619 aa0.24□□□□□ -2.37
SMB1YER029C YOR093CQ12275 1648 aa0.24□□□□□ -2.37
SMB1YER029C DNF2Q12675 1612 aa0.24□□□□□ -2.37
SMB1YER029C IRC20Q06554 1556 aa0.23□□□□□ -2.37
SMB1YER029C MYO4P32492 1471 aa0.23□□□□□ -2.37
SMB1YER029C IQG1Q12280 1495 aa0.23□□□□□ -2.37
SMB1YER029C PAI3P01094 68 aa0.23□□□□□ -2.37
SMB1YER029C TIM12P32830 109 aa0.23□□□□□ -2.37
SMB1YER029C YBR016WP38216 128 aa0.23□□□□□ -2.37
SMB1YER029C PAU7P39545 55 aa0.23□□□□□ -2.37
SMB1YER029C EDC1P53080 175 aaPredicted RBP0.23□□□□□ -2.37
SMB1YER029C YLR146W-AQ2V2P1 62 aa0.23□□□□□ -2.37
SMB1YER029C YOR032W-AQ8TGS1 66 aa0.23□□□□□ -2.37
SMB1YER029C CHC1P22137 1653 aaKnown RBP0.23□□□□□ -2.37
SMB1YER029C YBT1P32386 1661 aa0.23□□□□□ -2.37
SMB1YER029C BUD3P25558 1636 aa0.23□□□□□ -2.37
SMB1YER029C VMR1P38735 1592 aa0.23□□□□□ -2.37
SMB1YER029C RPO31P04051 1460 aa0.22□□□□□ -2.37
SMB1YER029C CSF1Q12150 2958 aa0.22□□□□□ -2.37
SMB1YER029C SSS1P35179 80 aa0.22□□□□□ -2.37
SMB1YER029C OLI1P61829 76 aa0.22□□□□□ -2.37
SMB1YER029C ATP17Q06405 101 aa0.22□□□□□ -2.37
SMB1YER029C YKL018C-AQ3E7A7 99 aa0.22□□□□□ -2.37
SMB1YER029C YGR035W-AQ45U48 73 aa0.22□□□□□ -2.37
SMB1YER029C SPT6P23615 1451 aaKnown RBP0.22□□□□□ -2.37
SMB1YER029C TRA1P38811 3744 aa0.22□□□□□ -2.37
SMB1YER029C IRA2P19158 3079 aa0.22□□□□□ -2.37
SMB1YER029C MMS1Q06211 1407 aa0.21□□□□□ -2.38
SMB1YER029C ERI1P62651 68 aaKnown RBP0.21□□□□□ -2.38
SMB1YER029C YFL041W-AQ3E817 63 aa0.21□□□□□ -2.38
SMB1YER029C HAP1P0CE41 1502 aa0.21□□□□□ -2.38
SMB1YER029C YCF1P39109 1515 aaKnown RBP0.21□□□□□ -2.38
SMB1YER029C VPS15P22219 1454 aa0.21□□□□□ -2.38
SMB1YER029C TOM1Q03280 3268 aa0.2□□□□□ -2.38
SMB1YER029C CDC25P04821 1589 aa0.2□□□□□ -2.38
SMB1YER029C RKR1Q04781 1562 aa0.2□□□□□ -2.38
SMB1YER029C VTH1P40438 1549 aa0.2□□□□□ -2.38
SMB1YER029C VTH2P40890 1549 aa0.2□□□□□ -2.38
SMB1YER029C PDR15Q04182 1529 aaKnown RBP0.2□□□□□ -2.38
SMB1YER029C SEN1Q00416 2231 aaKnown RBP0.2□□□□□ -2.38
SMB1YER029C YSY6P38374 65 aa0.2□□□□□ -2.38
SMB1YER029C SIP18P50263 79 aa0.2□□□□□ -2.38
SMB1YER029C YGR025WP53216 100 aa0.2□□□□□ -2.38
SMB1YER029C YCR108CQ3E819 63 aa0.2□□□□□ -2.38
SMB1YER029C HUB1Q6Q546 73 aa0.2□□□□□ -2.38
SMB1YER029C NUM1Q00402 2748 aa0.2□□□□□ -2.38
SMB1YER029C PEP1P32319 1579 aa0.19□□□□□ -2.38
SMB1YER029C SSK2P53599 1579 aa0.19□□□□□ -2.38
SMB1YER029C BCK1Q01389 1478 aa0.19□□□□□ -2.38
SMB1YER029C YBL039W-BP0C268 59 aa0.19□□□□□ -2.38
SMB1YER029C YBL044WP38194 122 aa0.19□□□□□ -2.38
SMB1YER029C SPI1P40092 148 aa0.19□□□□□ -2.38
SMB1YER029C YIL102C-AQ2V2P5 75 aa0.19□□□□□ -2.38
SMB1YER029C YDR246W-AQ3E763 66 aa0.19□□□□□ -2.38
SMB1YER029C TEL1P38110 2787 aa0.19□□□□□ -2.38
SMB1YER029C FIG2P25653 1609 aa0.19□□□□□ -2.38
SMB1YER029C IRA1P18963 3092 aa0.19□□□□□ -2.38
SMB1YER029C PDR5P33302 1511 aaKnown RBP0.18□□□□□ -2.38
SMB1YER029C RPS30AP0CX33 63 aaKnown RBP0.18□□□□□ -2.38
SMB1YER029C RPS30BP0CX34 63 aaKnown RBP0.18□□□□□ -2.38
SMB1YER029C RPS27AP35997 82 aaKnown RBP0.18□□□□□ -2.38
SMB1YER029C YBR200W-AQ3E755 54 aa0.18□□□□□ -2.38
SMB1YER029C YOR011W-AQ3E807 68 aa0.18□□□□□ -2.38
SMB1YER029C YOR394C-AQ8TGJ0 55 aa0.18□□□□□ -2.38
Retrieved 100 of 5,963 RNA–protein pairs in 25.3 ms