RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 MFSD10Q14728 455 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 TTC30AQ86WT1 665 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 DNAJB3Q8WWF6 145 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 RXFP2Q8WXD0 754 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 TRIM6Q9C030 488 aaPredicted RBP18.34■□□□□ 0.53
ERCC2-211ENST00000588652 NOD2Q9HC29 1040 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 UBN1Q9NPG3 1134 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 CNTN3Q9P232 1028 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 SHOC2Q9UQ13 582 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 SPAG7O75391 227 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 RGS7P49802 495 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 MGAT5Q09328 741 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 PMF1Q6P1K2 205 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 CYP4V2Q6ZWL3 525 aaPredicted RBP18.34■□□□□ 0.53
ERCC2-211ENST00000588652 FITM2Q8N6M3 262 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 TMEM40Q8WWA1 233 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 PRCCQ92733 491 aaPredicted RBP18.34■□□□□ 0.53
ERCC2-211ENST00000588652 YY1AP1Q9H869 796 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 RXFP1Q9HBX9 757 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 RNF19AQ9NV58 838 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 GJD2Q9UKL4 321 aa18.34■□□□□ 0.53
ERCC2-211ENST00000588652 POC1B-GALNT4F8VUJ3 575 aa18.33■□□□□ 0.53
ERCC2-211ENST00000588652 ALOX15BO15296 676 aa18.33■□□□□ 0.53
ERCC2-211ENST00000588652 GRAP2O75791 330 aa18.33■□□□□ 0.53
ERCC2-211ENST00000588652 ASMTLO95671 621 aa18.33■□□□□ 0.53
ERCC2-211ENST00000588652 NQO1P15559 274 aaKnown RBP18.33■□□□□ 0.53
ERCC2-211ENST00000588652 GDF10P55107 478 aa18.33■□□□□ 0.53
ERCC2-211ENST00000588652 KCNJ2P63252 427 aa18.33■□□□□ 0.53
ERCC2-211ENST00000588652 C15orf59Q2T9L4 293 aaPredicted RBP18.33■□□□□ 0.53
ERCC2-211ENST00000588652 RAB6CQ53S08 254 aa18.33■□□□□ 0.53
ERCC2-211ENST00000588652 DENND1AQ8TEH3 1009 aa18.33■□□□□ 0.53
ERCC2-211ENST00000588652 CALN1Q9BXU9 219 aa18.33■□□□□ 0.53
ERCC2-211ENST00000588652 RAB6CQ9H0N0 254 aa18.33■□□□□ 0.53
ERCC2-211ENST00000588652 C10orf88Q9H8K7 445 aa18.33■□□□□ 0.53
ERCC2-211ENST00000588652 VPS37BQ9H9H4 285 aa18.33■□□□□ 0.53
ERCC2-211ENST00000588652 FAM49BQ9NUQ9 324 aa18.33■□□□□ 0.53
ERCC2-211ENST00000588652 APOC4-APOC2K7ER74 178 aa18.33■□□□□ 0.52
ERCC2-211ENST00000588652 PRPF4O43172 522 aaKnown RBP eCLIP18.33■□□□□ 0.52
ERCC2-211ENST00000588652 ENDOD1O94919 500 aa18.33■□□□□ 0.52
ERCC2-211ENST00000588652 APOC2P02655 101 aa18.33■□□□□ 0.52
ERCC2-211ENST00000588652 AKAP5P24588 427 aa18.33■□□□□ 0.52
ERCC2-211ENST00000588652 RIPK1Q13546 671 aa18.33■□□□□ 0.52
ERCC2-211ENST00000588652 PKN2Q16513 984 aaKnown RBP18.33■□□□□ 0.52
ERCC2-211ENST00000588652 C9orf57Q5W0N0 161 aa18.33■□□□□ 0.52
ERCC2-211ENST00000588652 RNF43Q68DV7 783 aa18.33■□□□□ 0.52
ERCC2-211ENST00000588652 CAPN12Q6ZSI9 719 aa18.33■□□□□ 0.52
ERCC2-211ENST00000588652 CENPUQ71F23 418 aa18.33■□□□□ 0.52
ERCC2-211ENST00000588652 RFX6Q8HWS3 928 aa18.33■□□□□ 0.52
ERCC2-211ENST00000588652 ZBED8Q8IZ13 594 aa18.33■□□□□ 0.52
ERCC2-211ENST00000588652 GRAMD1AQ96CP6 724 aa18.33■□□□□ 0.52
ERCC2-211ENST00000588652 TRABDQ9H4I3 376 aa18.33■□□□□ 0.52
ERCC2-211ENST00000588652 KIF9Q9HAQ2 790 aa18.33■□□□□ 0.52
ERCC2-211ENST00000588652 BAIAP2L1Q9UHR4 511 aa18.33■□□□□ 0.52
ERCC2-211ENST00000588652 HAS3O00219 553 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 AXLP30530 894 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 SNX17Q15036 470 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 SOWAHAQ2M3V2 549 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 OLFML1Q6UWY5 402 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 CEP57Q86XR8 500 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 SLC35F5Q8WV83 523 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 APOL6Q9BWW8 343 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 SLC4A5Q9BY07 1137 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 RSAD1Q9HA92 442 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 PIN4Q9Y237 131 aaKnown RBP18.32■□□□□ 0.52
ERCC2-211ENST00000588652 IGF2BP3O00425 579 aaKnown RBP eCLIP18.32■□□□□ 0.52
ERCC2-211ENST00000588652 TREHO43280 583 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 SLC8A1P32418 973 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 PSEN2P49810 448 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 PDIA2Q13087 525 aaKnown RBP18.32■□□□□ 0.52
ERCC2-211ENST00000588652 CCL14Q16627 93 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 CDO1Q16878 200 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 CST9Q5W186 159 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 FAM47EQ6ZV65 393 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 PCGF5Q86SE9 256 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 ECHDC2Q86YB7 292 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 ANKLE1Q8NAG6 615 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 PAIP2Q9BPZ3 127 aaKnown RBP18.32■□□□□ 0.52
ERCC2-211ENST00000588652 PITPNM3Q9BZ71 974 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.32■□□□□ 0.52
ERCC2-211ENST00000588652 KLHL14Q9P2G3 628 aa18.32■□□□□ 0.52
ERCC2-211ENST00000588652 UBQLN1Q9UMX0 589 aaKnown RBP18.32■□□□□ 0.52
ERCC2-211ENST00000588652 FARP1Q9Y4F1 1045 aaPredicted RBP18.32■□□□□ 0.52
ERCC2-211ENST00000588652 BANF1O75531 89 aa18.31■□□□□ 0.52
ERCC2-211ENST00000588652 SLC18A1P54219 525 aa18.31■□□□□ 0.52
ERCC2-211ENST00000588652 ZNF200P98182 395 aaPredicted RBP18.31■□□□□ 0.52
ERCC2-211ENST00000588652 TMEM110Q86TL2 294 aa18.31■□□□□ 0.52
ERCC2-211ENST00000588652 UNC93AQ86WB7 457 aa18.31■□□□□ 0.52
ERCC2-211ENST00000588652 OR6B3Q8NGW1 331 aa18.31■□□□□ 0.52
ERCC2-211ENST00000588652 PPCSQ9HAB8 311 aa18.31■□□□□ 0.52
ERCC2-211ENST00000588652 SETSIPP0DME0 302 aa18.31■□□□□ 0.52
ERCC2-211ENST00000588652 KRT15P19012 456 aa18.31■□□□□ 0.52
ERCC2-211ENST00000588652 CDH6P55285 790 aa18.31■□□□□ 0.52
ERCC2-211ENST00000588652 MMRN1Q13201 1228 aa18.31■□□□□ 0.52
ERCC2-211ENST00000588652 CCDC14Q49A88 953 aa18.31■□□□□ 0.52
ERCC2-211ENST00000588652 RSAD2Q8WXG1 361 aa18.31■□□□□ 0.52
ERCC2-211ENST00000588652 KHSRPQ92945 711 aaKnown RBP eCLIP18.31■□□□□ 0.52
ERCC2-211ENST00000588652 DPEP3Q9H4B8 488 aa18.31■□□□□ 0.52
ERCC2-211ENST00000588652 RRAGCQ9HB90 399 aa18.31■□□□□ 0.52
ERCC2-211ENST00000588652 SENP1Q9P0U3 644 aa18.31■□□□□ 0.52
ERCC2-211ENST00000588652 HESX1Q9UBX0 185 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms