RNA–Protein interactions for RNA: ENST00000542930.1

C2CD3-219, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 3

Gene C2CD3, Length 524 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-219ENST00000542930 NCKAP1LP55160 1127 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 MYL7Q01449 175 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 BNC1Q01954 994 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 SEMG2Q02383 582 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 TRIM29Q14134 588 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 ZNF174Q15697 407 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 C6orf118Q5T5N4 469 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 BTBD8Q5XKL5 378 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 DHRS13Q6UX07 377 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 METTL3Q86U44 580 aaKnown RBP10.05□□□□□ -0.8
C2CD3-219ENST00000542930 DDX42Q86XP3 938 aaKnown RBP eCLIP10.05□□□□□ -0.8
C2CD3-219ENST00000542930 SPATA2LQ8IUW3 424 aaPredicted RBP10.05□□□□□ -0.8
C2CD3-219ENST00000542930 SCN4BQ8IWT1 228 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 CHPFQ8IZ52 775 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 PDCL2Q8N4E4 241 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 NAT16Q8N8M0 369 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 ENGASEQ8NFI3 743 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 OTUB2Q96DC9 234 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 WBP1Q96G27 269 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 SPATA17Q96L03 361 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 CEP295NLQ96MC4 621 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 GABRG3Q99928 467 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 MSTO1Q9BUK6 570 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 MIR1-1HGQ9H1L0 117 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 SMPD4Q9NXE4 827 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 DDX43Q9NXZ2 648 aaKnown RBP10.05□□□□□ -0.8
C2CD3-219ENST00000542930 WSB2Q9NYS7 404 aaPredicted RBP10.05□□□□□ -0.8
C2CD3-219ENST00000542930 CFAP97Q9P2B7 532 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 DNMT3LQ9UJW3 386 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 BTBD3Q9Y2F9 522 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 PTPN13Q12923 2485 aa10.05□□□□□ -0.8
C2CD3-219ENST00000542930 MYOFQ9NZM1 2061 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 E2F8A0AVK6 867 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 ZNF840PA6NDX5 716 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 B8ZZF3 427 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 HOXC11O43248 304 aaPredicted RBP10.04□□□□□ -0.8
C2CD3-219ENST00000542930 REC8O95072 547 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 SCP2P22307 547 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 ACAT1P24752 427 aaKnown RBP10.04□□□□□ -0.8
C2CD3-219ENST00000542930 HNF1BP35680 557 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 PNPLA4P41247 253 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 SRSF1Q07955 248 aaKnown RBP eCLIP10.04□□□□□ -0.8
C2CD3-219ENST00000542930 RAD51AP2Q09MP3 1159 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 MYO1EQ12965 1108 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 TAF1BQ53T94 588 aaPredicted RBP10.04□□□□□ -0.8
C2CD3-219ENST00000542930 CCDC157Q569K6 752 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 EGFLAMQ63HQ2 1017 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 DENND5BQ6ZUT9 1274 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 TMEM86AQ8N2M4 240 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 IGSF22Q8N9C0 903 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 FAM181AQ8N9Y4 354 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 SNIP1Q8TAD8 396 aaKnown RBP10.04□□□□□ -0.8
C2CD3-219ENST00000542930 TOE1Q96GM8 510 aaKnown RBP10.04□□□□□ -0.8
C2CD3-219ENST00000542930 ZNF560Q96MR9 790 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 ACOX2Q99424 681 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 GPR174Q9BXC1 333 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 RAB34Q9BZG1 259 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 SLC6A17Q9H1V8 727 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 EHD2Q9NZN4 543 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 LARSQ9P2J5 1176 aaKnown RBP10.04□□□□□ -0.8
C2CD3-219ENST00000542930 PCDHB6Q9Y5E3 794 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 AK5Q9Y6K8 562 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 CABIN1Q9Y6J0 2220 aa10.04□□□□□ -0.8
C2CD3-219ENST00000542930 TCHHQ07283 1943 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 A0A1B0GVT2 93 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 METTL12A8MUP2 240 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 EPB41L2O43491 1005 aaKnown RBP10.03□□□□□ -0.8
C2CD3-219ENST00000542930 HUS1O60921 280 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 WISP1O95388 367 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 OAS1P00973 400 aaKnown RBP10.03□□□□□ -0.8
C2CD3-219ENST00000542930 JUPP14923 745 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 ACOT2P49753 483 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 USP46P62068 366 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 CXADRP78310 365 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 TLE3Q04726 772 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 RTP5Q14D33 572 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 CCDC142Q17RM4 750 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 DCAF12L1Q5VU92 463 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 KRT79Q5XKE5 535 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 VSTM1Q6UX27 236 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 KIAA1324Q6UXG2 1013 aaKnown RBP10.03□□□□□ -0.8
C2CD3-219ENST00000542930 C4orf50Q6ZRC1 276 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 KCNK18Q7Z418 384 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 C4orf32Q8N8J7 132 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 KNL1Q8NG31 2342 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 C1orf216Q8TAB5 229 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 FGF11Q92914 225 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 ERLEC1Q96DZ1 483 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 TTLL2Q9BWV7 592 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 TEX15Q9BXT5 2789 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 NRSN2Q9GZP1 204 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 ITM2CQ9NQX7 267 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 KCND2Q9NZV8 630 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 GMIPQ9P107 970 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 USP36Q9P275 1121 aaKnown RBP10.03□□□□□ -0.8
C2CD3-219ENST00000542930 L1RE1Q9UN81 338 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 PCDHGA1Q9Y5H4 931 aa10.03□□□□□ -0.8
C2CD3-219ENST00000542930 GFRA2O00451 464 aa10.02□□□□□ -0.81
C2CD3-219ENST00000542930 TRIM24O15164 1050 aa10.02□□□□□ -0.81
C2CD3-219ENST00000542930 PCDHGA12O60330 932 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms