RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 TMED2Q15363 201 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 SKIDA1Q1XH10 827 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 RABGAP1LQ5R372 815 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 UBE2E3Q969T4 207 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 TEX12Q9BXU0 123 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 AGO4Q9HCK5 861 aaKnown RBP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 A0A0G2JMZ2 1700 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 MANSC4A6NHS7 340 aaPredicted RBP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 NPTX2P47972 431 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 PLTPP55058 493 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 FAM84AQ96KN4 292 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 TRAPPC9Q96Q05 1148 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 DCLK3Q9C098 648 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 RBM12Q9NTZ6 932 aaKnown RBP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 RIC8BQ9NVN3 520 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 TLK1Q9UKI8 766 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 WBP11Q9Y2W2 641 aaKnown RBP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 TTC3P53804 2025 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 IGLV3-22A0A075B6J6 115 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 SPDYE5A6NIY4 337 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 SNTNA6NMZ2 147 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 PEX14O75381 377 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 STMN1P16949 149 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 ALDH1A3P47895 512 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 SLC12A3P55017 1021 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 ACTR2P61160 394 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 SKP1P63208 163 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 PRKAA1Q13131 559 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF568Q3ZCX4 644 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 UGT3A1Q6NUS8 523 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 VSTM1Q6UX27 236 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 ST13P4Q8IZP2 240 aaPredicted RBP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 DDI1Q8WTU0 396 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 SMARCD1Q96GM5 515 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 FAM161BQ96MY7 647 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 SLC4A9Q96Q91 983 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 CPNE1Q99829 537 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 MORF4L1Q9UBU8 362 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 RSL24D1Q9UHA3 163 aaKnown RBP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 TLN1Q9Y490 2541 aaKnown RBP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 C3orf70A6NLC5 250 aaPredicted RBP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 C16orf96A6NNT2 1141 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 PEX5P50542 639 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 GALNT1Q10472 559 aaPredicted RBP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 PDK4Q16654 411 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 NUDT18Q6ZVK8 323 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 RBBP8NLQ8NC74 664 aaPredicted RBP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 ACSBG1Q96GR2 724 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 MMS19Q96T76 1030 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 SLC25A23Q9BV35 468 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 PRRG3Q9BZD7 231 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 AAASQ9NRG9 546 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 PTBP2Q9UKA9 531 aaKnown RBP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 MCM3APO60318 1980 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 A0A087X0T9 212 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF839A8K0R7 811 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 TDP2O95551 362 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 S100BP04271 92 aaPredicted RBP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 CYP1A1P04798 512 aaPredicted RBP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 PRKCBP05771 671 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 RPSAP08865 295 aaKnown RBP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 FAM228BP0C875 321 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 CRABP2P29373 138 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 CDH6P55285 790 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 ATP6V0D1P61421 351 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 CYP27A1Q02318 531 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 HSP90AA4PQ58FG1 418 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 LCLAT1Q6UWP7 414 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 ZNF783Q6ZMS7 281 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 TTC8Q8TAM2 541 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 SLC35G2Q8TBE7 412 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 TLCD1Q96CP7 247 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 ZBED3Q96IU2 234 aaPredicted RBP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 PITPNM3Q9BZ71 974 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 FTOQ9C0B1 505 aaKnown RBP eCLIP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 TRABDQ9H4I3 376 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 PCDHA2Q9Y5H9 948 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 MAFBQ9Y5Q3 323 aaPredicted RBP3.91□□□□□ -1.78
SHPRH-205ENST00000433355 CA12O43570 354 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 GLRA3O75311 464 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 CD9P21926 228 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 CNGA2Q16280 664 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 ATF7IP2Q5U623 682 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 WDR59Q6PJI9 974 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 ADGRG6Q86SQ4 1221 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 C2orf69Q8N8R5 385 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 KLHL29Q96CT2 875 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 RAD21L1Q9H4I0 556 aa3.91□□□□□ -1.78
SHPRH-205ENST00000433355 BCLAF3A2AJT9 711 aaKnown RBP3.9□□□□□ -1.78
SHPRH-205ENST00000433355 FAM177BA6PVY3 158 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 LATS1O95835 1130 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 MYBP10242 640 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 ITGB6P18564 788 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 PIK3CBP42338 1070 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 PNLIPRP1P54315 467 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 CBX1P83916 185 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 ACAD10Q6JQN1 1059 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 NFRKBQ6P4R8 1299 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 IRF2BP1Q8IU81 584 aa3.9□□□□□ -1.78
SHPRH-205ENST00000433355 NLRP7Q8WX94 980 aa3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms