RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Slc25a13Q9QXX4 676 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Skp1Q9WTX5 163 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ifnar2O35664 513 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Phox2bO35690 314 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Bcat2O35855 393 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Sod2P09671 222 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gstm1P10649 218 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Nme2Q01768 152 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Fhdc1Q3ULZ2 1149 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 AsnsQ61024 561 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Slc29a2Q61672 456 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Lrig3Q6P1C6 1117 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Pdk1Q8BFP9 434 aaKnown RBP9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cacnb1Q8R3Z5 597 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Atp6v0a4Q920R6 833 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Elp3Q9CZX0 547 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm11397F6V5V4 377 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Magea8O89012 320 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Il1bP10749 269 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ptpn6P29351 595 aaKnown RBP9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cst8P32766 142 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Rc3h1Q4VGL6 1130 aaKnown RBP9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ces1eQ64176 562 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cyp2c29Q64458 490 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Rbl2Q64700 1135 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 HpseQ6YGZ1 535 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Smpd4Q6ZPR5 823 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 ErasQ7TN89 227 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Mtif2Q91YJ5 727 aaKnown RBP9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tspan1Q99J59 240 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Nmrk2Q9D7C9 195 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Vmn1r40Q9EQ46 310 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Trpm5Q9JJH7 1158 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Dnaaf5B9EJR8 853 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Eef2kO08796 724 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cyp4a10O88833 509 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 AdaP03958 352 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 PitpnbP53811 271 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 StomP54116 284 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gal3st4Q3V1B8 480 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Opa3Q505D7 179 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Sec14l3Q5SQ27 401 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Med22Q62276 200 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 PolnQ7TQ07 864 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Lrrc1Q80VQ1 524 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Trmt13Q8BYH3 481 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Vash1Q8C1W1 375 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Slc24a5Q8C261 501 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Cdk17Q8K0D0 523 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Dcun1d3Q8K0V2 304 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Dusp15Q8R4V2 235 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Krt25Q8VCW2 446 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Stx18Q8VDS8 334 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Elmod3Q91YP6 381 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tbc1d15Q9CXF4 671 aa9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tjp2Q9Z0U1 1167 aaKnown RBP9.27□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Zfp109A0A0U1RPC5 652 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Rab11fip2G3XA57 512 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 TpmtO55060 240 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Fv4P11370 679 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 C2P21180 760 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 RxrgP28705 463 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ckmt1P30275 418 aaKnown RBP9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 CidecP56198 239 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Sec1P97353 368 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 B4galnt1Q09200 533 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Rbm44Q3V089 1013 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Syce1lQ5D525 247 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Bfsp2Q6NVD9 416 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Prpf39Q8K2Z2 665 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Eif3fQ9DCH4 361 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 DiabloQ9JIQ3 237 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Galk1Q9R0N0 392 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Rbbp8nlA2ABX0 614 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Sec14l5B2RXM5 696 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gm5849J3QPE5 117 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Capn1O35350 713 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Sp100O35892 482 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Nck2O55033 380 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Slc25a17O70579 307 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Q3TQQ9 903 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Esrp1Q3US41 680 aaKnown RBP9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Krt87Q6IMF0 495 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Srrm3Q80WV7 648 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tmem117Q8BH18 514 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Bmp2kQ91Z96 1138 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 YwhabQ9CQV8 246 aaKnown RBP9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 4933400A11RikQ9CR52 288 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Glod5Q9D8I3 148 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Tbc1d20Q9D9I4 402 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Scgb2b20Q9JI02 112 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Olfr1032A2ATE5 310 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 BC035947B2RQY6 695 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gp5O08742 567 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ube2kP61087 200 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Q3UK37 420 aa9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Igf2bp2Q5SF07 592 aaKnown RBP9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 TmpoQ61033 693 aaKnown RBP9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Ino80dQ66JY2 873 aaKnown RBP9.26□□□□□ -0.93
Clcn3-202ENSMUST00000056508 Gpatch3Q8BIY1 525 aa9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms