Protein–RNA interactions for Protein: Q8C1W1

Vash1, Vasohibin-1, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vash1Q8C1W1 Gm25239-201ENSMUST00000174915 86 ntBASIC31.43■■■□□ 2.62
Vash1Q8C1W1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Vash1Q8C1W1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC29■■■□□ 2.23
Vash1Q8C1W1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Vash1Q8C1W1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
Vash1Q8C1W1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Vash1Q8C1W1 Psd-208ENSMUST00000224556 2034 ntBASIC27.74■■■□□ 2.03
Vash1Q8C1W1 Gm15042-201ENSMUST00000120212 883 ntBASIC27.61■■■□□ 2.01
Vash1Q8C1W1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Vash1Q8C1W1 Gm24109-201ENSMUST00000175489 103 ntBASIC27.18■■□□□ 1.94
Vash1Q8C1W1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Vash1Q8C1W1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Vash1Q8C1W1 Gm15045-201ENSMUST00000117359 883 ntBASIC26.88■■□□□ 1.89
Vash1Q8C1W1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Vash1Q8C1W1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Vash1Q8C1W1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Vash1Q8C1W1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Vash1Q8C1W1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Vash1Q8C1W1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Vash1Q8C1W1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Vash1Q8C1W1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Vash1Q8C1W1 Gm23366-201ENSMUST00000175022 89 ntBASIC26.36■■□□□ 1.81
Vash1Q8C1W1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.3■■□□□ 1.8
Vash1Q8C1W1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Vash1Q8C1W1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Vash1Q8C1W1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Vash1Q8C1W1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
Vash1Q8C1W1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Vash1Q8C1W1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
Vash1Q8C1W1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Vash1Q8C1W1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Vash1Q8C1W1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Vash1Q8C1W1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.52■■□□□ 1.68
Vash1Q8C1W1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
Vash1Q8C1W1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.49■■□□□ 1.67
Vash1Q8C1W1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Vash1Q8C1W1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC25.48■■□□□ 1.67
Vash1Q8C1W1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.45■■□□□ 1.66
Vash1Q8C1W1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Vash1Q8C1W1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Vash1Q8C1W1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
Vash1Q8C1W1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC25.36■■□□□ 1.65
Vash1Q8C1W1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC25.35■■□□□ 1.65
Vash1Q8C1W1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Vash1Q8C1W1 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.2■■□□□ 1.62
Vash1Q8C1W1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
Vash1Q8C1W1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Vash1Q8C1W1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.12■■□□□ 1.61
Vash1Q8C1W1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC25.12■■□□□ 1.61
Vash1Q8C1W1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Vash1Q8C1W1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.07■■□□□ 1.6
Vash1Q8C1W1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Vash1Q8C1W1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Vash1Q8C1W1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC24.89■■□□□ 1.58
Vash1Q8C1W1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
Vash1Q8C1W1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Vash1Q8C1W1 Gm42596-201ENSMUST00000196305 1958 ntBASIC24.78■■□□□ 1.56
Vash1Q8C1W1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.74■■□□□ 1.55
Vash1Q8C1W1 Gm25238-201ENSMUST00000174914 89 ntBASIC24.71■■□□□ 1.55
Vash1Q8C1W1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Vash1Q8C1W1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Vash1Q8C1W1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
Vash1Q8C1W1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
Vash1Q8C1W1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
Vash1Q8C1W1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Vash1Q8C1W1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Vash1Q8C1W1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Vash1Q8C1W1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Vash1Q8C1W1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Vash1Q8C1W1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
Vash1Q8C1W1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Vash1Q8C1W1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Vash1Q8C1W1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Vash1Q8C1W1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Vash1Q8C1W1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC24.37■■□□□ 1.49
Vash1Q8C1W1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.37■■□□□ 1.49
Vash1Q8C1W1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC24.29■■□□□ 1.48
Vash1Q8C1W1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Vash1Q8C1W1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Vash1Q8C1W1 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Vash1Q8C1W1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Vash1Q8C1W1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Vash1Q8C1W1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Vash1Q8C1W1 Gm27325-201ENSMUST00000175467 74 ntBASIC24.16■■□□□ 1.46
Vash1Q8C1W1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Vash1Q8C1W1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Vash1Q8C1W1 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.09■■□□□ 1.45
Vash1Q8C1W1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.44
Vash1Q8C1W1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Vash1Q8C1W1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.04■■□□□ 1.44
Vash1Q8C1W1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Vash1Q8C1W1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Vash1Q8C1W1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Vash1Q8C1W1 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
Vash1Q8C1W1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Vash1Q8C1W1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.92■■□□□ 1.42
Vash1Q8C1W1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC23.92■■□□□ 1.42
Vash1Q8C1W1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vash1Q8C1W1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Vash1Q8C1W1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC23.86■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms