RNA–Protein interactions for RNA: YKL210W

UBA1, Transcript of Ubiquitin activating enzyme (E1), yeast

Gene UBA1, Length 3,075 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA1	YKL210W	MDM35	O60200	86 aa		4.16	□□□□□ -1.74
UBA1	YKL210W	DDR48	P18899	430 aa	Known RBP	4.16	□□□□□ -1.74
UBA1	YKL210W	SPI1	P40092	148 aa		4.16	□□□□□ -1.74
UBA1	YKL210W	RPB10	P22139	70 aa		4.16	□□□□□ -1.74
UBA1	YKL210W	YBL071C	P38185	102 aa		4.16	□□□□□ -1.74
UBA1	YKL210W	YSF3	P0C074	85 aa	Predicted RBP	4.15	□□□□□ -1.74
UBA1	YKL210W	IRA1	P18963	3092 aa		4.15	□□□□□ -1.74
UBA1	YKL210W	LDB16	P25587	256 aa		4.15	□□□□□ -1.75
UBA1	YKL210W	RPB9	P27999	122 aa		4.15	□□□□□ -1.75
UBA1	YKL210W	YHR022C	P38763	256 aa		4.15	□□□□□ -1.75
UBA1	YKL210W	PCP1	P53259	346 aa		4.15	□□□□□ -1.75
UBA1	YKL210W	NOP10	Q6Q547	58 aa	Predicted RBP	4.15	□□□□□ -1.75
UBA1	YKL210W	YFR035C	P43608	114 aa		4.14	□□□□□ -1.75
UBA1	YKL210W	MGR2	Q02889	113 aa		4.14	□□□□□ -1.75
UBA1	YKL210W	YMR254C	Q04838	102 aa		4.14	□□□□□ -1.75
UBA1	YKL210W	YGL258W-A	Q3E740	77 aa		4.14	□□□□□ -1.75
UBA1	YKL210W	YKR045C	P36138	183 aa		4.14	□□□□□ -1.75
UBA1	YKL210W	PEX17	P40155	199 aa		4.14	□□□□□ -1.75
UBA1	YKL210W	SED1	Q01589	338 aa		4.14	□□□□□ -1.75
UBA1	YKL210W	CRC1	Q12289	327 aa		4.14	□□□□□ -1.75
UBA1	YKL210W	YCR022C	P25620	114 aa		4.13	□□□□□ -1.75
UBA1	YKL210W	YER135C	P40082	130 aa		4.13	□□□□□ -1.75
UBA1	YKL210W	SPG4	Q04438	115 aa		4.13	□□□□□ -1.75
UBA1	YKL210W	YIR020C	P40575	100 aa		4.13	□□□□□ -1.75
UBA1	YKL210W	YGR025W	P53216	100 aa		4.13	□□□□□ -1.75
UBA1	YKL210W	YOR008C-A	Q3E7B9	74 aa		4.13	□□□□□ -1.75
UBA1	YKL210W	YOR032W-A	Q8TGS1	66 aa		4.13	□□□□□ -1.75
UBA1	YKL210W	RTG1	P32607	177 aa		4.12	□□□□□ -1.75
UBA1	YKL210W	YEL045C	P32616	141 aa		4.12	□□□□□ -1.75
UBA1	YKL210W	REE1	P40893	198 aa		4.12	□□□□□ -1.75
UBA1	YKL210W	PGU1	P47180	361 aa		4.12	□□□□□ -1.75
UBA1	YKL210W	FMP27	Q06179	2628 aa		4.12	□□□□□ -1.75
UBA1	YKL210W	YDL009C	Q12210	107 aa		4.12	□□□□□ -1.75
UBA1	YKL210W	HFA1	P32874	2273 aa		4.12	□□□□□ -1.75
UBA1	YKL210W	YHL005C	P38752	130 aa		4.11	□□□□□ -1.75
UBA1	YKL210W	YMR122C	Q03879	124 aa		4.11	□□□□□ -1.75
UBA1	YKL210W	YOL085C	Q99345	113 aa		4.11	□□□□□ -1.75
UBA1	YKL210W	YGR018C	P53211	109 aa		4.11	□□□□□ -1.75
UBA1	YKL210W	MRPS12	P53732	153 aa		4.11	□□□□□ -1.75
UBA1	YKL210W	LEE1	Q02799	301 aa	Known RBP	4.11	□□□□□ -1.75
UBA1	YKL210W	YFL015C	P43578	164 aa		4.1	□□□□□ -1.75
UBA1	YKL210W	YGR121W-A	Q3E816	71 aa		4.1	□□□□□ -1.75
UBA1	YKL210W	RPS23A	P0CX29	145 aa	Known RBP	4.1	□□□□□ -1.75
UBA1	YKL210W	RPS23B	P0CX30	145 aa		4.1	□□□□□ -1.75
UBA1	YKL210W	TRS23	Q03784	219 aa		4.1	□□□□□ -1.75
UBA1	YKL210W	YPR153W	Q06537	140 aa		4.1	□□□□□ -1.75
UBA1	YKL210W	YML100W-A	Q8TGT0	57 aa		4.1	□□□□□ -1.75
UBA1	YKL210W	SHU1	P38751	150 aa		4.1	□□□□□ -1.75
UBA1	YKL210W	YLR162W	Q06235	118 aa		4.1	□□□□□ -1.75
UBA1	YKL210W	RPS30A	P0CX33	63 aa	Known RBP	4.09	□□□□□ -1.75
UBA1	YKL210W	RPS30B	P0CX34	63 aa	Known RBP	4.09	□□□□□ -1.75
UBA1	YKL210W	SAP30	P38429	201 aa		4.09	□□□□□ -1.75
UBA1	YKL210W	RNH203	Q12338	110 aa		4.09	□□□□□ -1.75
UBA1	YKL210W	YOR020W-A	Q3E824	90 aa		4.09	□□□□□ -1.75
UBA1	YKL210W	OST5	Q92316	86 aa		4.09	□□□□□ -1.75
UBA1	YKL210W	TOS6	P48560	102 aa		4.09	□□□□□ -1.75
UBA1	YKL210W	YOL160W	Q08321	113 aa		4.09	□□□□□ -1.75
UBA1	YKL210W	YDR010C	Q12426	110 aa		4.09	□□□□□ -1.75
UBA1	YKL210W	YKL097C	P34245	136 aa		4.08	□□□□□ -1.76
UBA1	YKL210W	SPC1	P46965	94 aa		4.08	□□□□□ -1.76
UBA1	YKL210W	TSC3	Q3E790	80 aa		4.08	□□□□□ -1.76
UBA1	YKL210W	YJR107C-A	P0CT86	78 aa		4.08	□□□□□ -1.76
UBA1	YKL210W	MSA2	P36157	363 aa		4.08	□□□□□ -1.76
UBA1	YKL210W	CTR2	P38865	189 aa		4.08	□□□□□ -1.76
UBA1	YKL210W	YIL102C	P40488	101 aa		4.08	□□□□□ -1.76
UBA1	YKL210W	RPR2	P40571	144 aa		4.07	□□□□□ -1.76
UBA1	YKL210W	URM1	P40554	99 aa	Predicted RBP	4.07	□□□□□ -1.76
UBA1	YKL210W	SRL1	Q08673	210 aa		4.06	□□□□□ -1.76
UBA1	YKL210W	YAL065C	O13511	128 aa		4.06	□□□□□ -1.76
UBA1	YKL210W	ARC15	P40518	154 aa	RIP-Chip data	4.06	□□□□□ -1.76	not detected
UBA1	YKL210W	YER145C-A	A0A023PYF4	145 aa		4.06	□□□□□ -1.76
UBA1	YKL210W	YER188C-A	P0C0V2	99 aa		4.06	□□□□□ -1.76
UBA1	YKL210W	MPC3	P53311	146 aa		4.06	□□□□□ -1.76
UBA1	YKL210W	YBR144C	P34215	104 aa		4.05	□□□□□ -1.76
UBA1	YKL210W	YIL156W-B	Q2V2P4	73 aa		4.05	□□□□□ -1.76
UBA1	YKL210W	YDR034W-B	Q6Q5X2	51 aa		4.05	□□□□□ -1.76
UBA1	YKL210W	POR2	P40478	281 aa		4.05	□□□□□ -1.76
UBA1	YKL210W	YOR314W	Q12506	109 aa		4.05	□□□□□ -1.76
UBA1	YKL210W	FPR1	P20081	114 aa	Known RBP	4.04	□□□□□ -1.76
UBA1	YKL210W	COX17	Q12287	69 aa		4.04	□□□□□ -1.76
UBA1	YKL210W	PRP8	P33334	2413 aa	Known RBP	4.04	□□□□□ -1.76
UBA1	YKL210W	YGR035W-A	Q45U48	73 aa		4.03	□□□□□ -1.76
UBA1	YKL210W	HHF1	P02309	103 aa	Known RBP	4.03	□□□□□ -1.76
UBA1	YKL210W	YGL015C	P33199	130 aa		4.03	□□□□□ -1.76
UBA1	YKL210W	YJR146W	P47174	117 aa		4.03	□□□□□ -1.76
UBA1	YKL210W	YPR013C	Q12145	317 aa		4.02	□□□□□ -1.77
UBA1	YKL210W	RGM1	Q00453	211 aa		4.01	□□□□□ -1.77
UBA1	YKL210W	YLR342W-A	Q3E810	57 aa		4.01	□□□□□ -1.77
UBA1	YKL210W	FYV5	P25585	152 aa		4.01	□□□□□ -1.77
UBA1	YKL210W	YKR073C	P36153	106 aa		4.01	□□□□□ -1.77
UBA1	YKL210W	YJL027C	P47063	138 aa	Predicted RBP	4.01	□□□□□ -1.77
UBA1	YKL210W	RRT1	P38192	103 aa		4.01	□□□□□ -1.77
UBA1	YKL210W	YOL166W-A	Q8TGJ1	51 aa		4	□□□□□ -1.77
UBA1	YKL210W	CCW12	Q12127	133 aa		3.99	□□□□□ -1.77
UBA1	YKL210W	YPS5	P53057	165 aa		3.99	□□□□□ -1.77
UBA1	YKL210W	YEL008W	P40001	126 aa		3.98	□□□□□ -1.77
UBA1	YKL210W	GCN1	P33892	2672 aa	Known RBP	3.98	□□□□□ -1.77
UBA1	YKL210W	RPL36B	O14455	100 aa	Known RBP	3.98	□□□□□ -1.77
UBA1	YKL210W	RPL36A	P05745	100 aa	Predicted RBP	3.98	□□□□□ -1.77
UBA1	YKL210W	RPL39	P04650	51 aa		3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms