RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C YBR090CP38253 122 aa-0.07□□□□□ -2.42
SWI5YDR146C SNU13P39990 126 aaKnown RBP-0.07□□□□□ -2.42
SWI5YDR146C RPS12P48589 143 aaKnown RBP-0.07□□□□□ -2.42
SWI5YDR146C EDC1P53080 175 aaPredicted RBP-0.07□□□□□ -2.42
SWI5YDR146C YBR201C-AQ2V2Q3 67 aa-0.07□□□□□ -2.42
SWI5YDR146C SDH6Q3E785 79 aa-0.07□□□□□ -2.42
SWI5YDR146C KSH1Q8TGJ3 72 aa-0.07□□□□□ -2.42
SWI5YDR146C Q0032Q9ZZX7 96 aa-0.07□□□□□ -2.42
SWI5YDR146C SEN1Q00416 2231 aaKnown RBP-0.07□□□□□ -2.42
SWI5YDR146C DNF3Q12674 1656 aa-0.07□□□□□ -2.42
SWI5YDR146C TY1B-LR3P0C2I6 1755 aaKnown RBP-0.07□□□□□ -2.42
SWI5YDR146C TY1B-PR3P0C2J1 1755 aaKnown RBP-0.07□□□□□ -2.42
SWI5YDR146C BPH1P25356 2167 aa-0.07□□□□□ -2.42
SWI5YDR146C TSC11P40061 1430 aa-0.08□□□□□ -2.42
SWI5YDR146C PMD1P32634 1753 aa-0.08□□□□□ -2.42
SWI5YDR146C TY1B-BRQ12193 1756 aa-0.08□□□□□ -2.42
SWI5YDR146C ECM12O13529 151 aa-0.08□□□□□ -2.42
SWI5YDR146C YHR214C-DP0CX93 97 aa-0.08□□□□□ -2.42
SWI5YDR146C NHP2P32495 156 aaPredicted RBP-0.08□□□□□ -2.42
SWI5YDR146C RGI1P40043 161 aaPredicted RBP-0.08□□□□□ -2.42
SWI5YDR146C RPS29AP41057 56 aaKnown RBP-0.08□□□□□ -2.42
SWI5YDR146C BSC4P53841 131 aa-0.08□□□□□ -2.42
SWI5YDR146C ATP18P81450 59 aa-0.08□□□□□ -2.42
SWI5YDR146C YDR029WQ12111 104 aa-0.08□□□□□ -2.42
SWI5YDR146C YKL068W-AQ3E826 78 aa-0.08□□□□□ -2.42
SWI5YDR146C REV3P14284 1504 aa-0.08□□□□□ -2.42
SWI5YDR146C PDR11P40550 1411 aa-0.08□□□□□ -2.42
SWI5YDR146C MMS1Q06211 1407 aa-0.08□□□□□ -2.42
SWI5YDR146C GEA2P39993 1459 aaKnown RBP-0.08□□□□□ -2.42
SWI5YDR146C MDS3P53094 1487 aa-0.08□□□□□ -2.42
SWI5YDR146C HKR1P41809 1802 aa-0.08□□□□□ -2.42
SWI5YDR146C YAL065CO13511 128 aa-0.08□□□□□ -2.42
SWI5YDR146C YCR085WP25650 117 aa-0.08□□□□□ -2.42
SWI5YDR146C YBL044WP38194 122 aa-0.08□□□□□ -2.42
SWI5YDR146C YBR032WP38223 100 aa-0.08□□□□□ -2.42
SWI5YDR146C YOL097W-AQ3E7Y9 61 aa-0.08□□□□□ -2.42
SWI5YDR146C YMR122W-AQ3E842 84 aa-0.08□□□□□ -2.42
SWI5YDR146C TY1B-PR2P0C2J0 1756 aa-0.09□□□□□ -2.42
SWI5YDR146C UTP20P35194 2493 aaKnown RBP-0.09□□□□□ -2.42
SWI5YDR146C FPR2P32472 135 aa-0.09□□□□□ -2.42
SWI5YDR146C YPR108W-AQ3E7B3 70 aa-0.09□□□□□ -2.42
SWI5YDR146C MHF2Q3E829 80 aa-0.09□□□□□ -2.42
SWI5YDR146C SUS1Q6WNK7 96 aa-0.09□□□□□ -2.42
SWI5YDR146C YMR001C-AQ8TGS9 76 aa-0.09□□□□□ -2.42
SWI5YDR146C TY1B-DR6P0C2I3 1755 aa-0.09□□□□□ -2.42
SWI5YDR146C TY1B-LR2P0C2I5 1755 aa-0.09□□□□□ -2.42
SWI5YDR146C TY1B-JR2P47100 1755 aaKnown RBP-0.09□□□□□ -2.42
SWI5YDR146C TY1B-MR1Q04214 1755 aa-0.09□□□□□ -2.42
SWI5YDR146C TY1B-MR2Q04670 1755 aaKnown RBP-0.09□□□□□ -2.42
SWI5YDR146C TY1B-NL1Q12112 1755 aa-0.09□□□□□ -2.42
SWI5YDR146C TY1B-GR1Q12141 1755 aa-0.09□□□□□ -2.42
SWI5YDR146C TY1B-GR3Q12316 1755 aa-0.09□□□□□ -2.42
SWI5YDR146C TY1B-PLQ12414 1755 aaKnown RBP-0.09□□□□□ -2.42
SWI5YDR146C TY1B-ORQ92393 1755 aa-0.09□□□□□ -2.42
SWI5YDR146C RPA190P10964 1664 aaKnown RBP-0.1□□□□□ -2.42
SWI5YDR146C MSL1P40567 111 aaPredicted RBP-0.1□□□□□ -2.42
SWI5YDR146C FYV7Q12247 151 aa-0.1□□□□□ -2.42
SWI5YDR146C POL1P13382 1468 aa-0.1□□□□□ -2.43
SWI5YDR146C STT4P37297 1900 aa-0.1□□□□□ -2.43
SWI5YDR146C XRN1P22147 1528 aaKnown RBP-0.1□□□□□ -2.43
SWI5YDR146C GDB1Q06625 1536 aa-0.1□□□□□ -2.43
SWI5YDR146C YDR042CQ03205 200 aa-0.1□□□□□ -2.43
SWI5YDR146C PAU23Q07987 124 aa-0.1□□□□□ -2.43
SWI5YDR146C SCP1Q08873 200 aa-0.1□□□□□ -2.43
SWI5YDR146C PAU17Q12370 124 aa-0.1□□□□□ -2.43
SWI5YDR146C YKL018C-AQ3E7A7 99 aa-0.1□□□□□ -2.43
SWI5YDR146C YOR008C-AQ3E7B9 74 aa-0.1□□□□□ -2.43
SWI5YDR146C TY1B-DR5P0C2I2 1755 aa-0.1□□□□□ -2.43
SWI5YDR146C TY1B-PR1P0C2I9 1755 aaKnown RBP-0.1□□□□□ -2.43
SWI5YDR146C TY1B-JR1P47098 1755 aa-0.1□□□□□ -2.43
SWI5YDR146C TY1B-ML2Q03434 1755 aaKnown RBP-0.1□□□□□ -2.43
SWI5YDR146C TY1B-ER1Q03612 1755 aa-0.1□□□□□ -2.43
SWI5YDR146C TY1B-ER2Q03619 1755 aa-0.1□□□□□ -2.43
SWI5YDR146C TY1B-DR1Q03855 1755 aa-0.1□□□□□ -2.43
SWI5YDR146C TY1B-ML1Q04711 1755 aaKnown RBP-0.1□□□□□ -2.43
SWI5YDR146C TY1B-LR1Q12088 1755 aaKnown RBP-0.1□□□□□ -2.43
SWI5YDR146C TY1B-GR2Q12269 1755 aa-0.1□□□□□ -2.43
SWI5YDR146C TY1B-OLQ12273 1755 aa-0.1□□□□□ -2.43
SWI5YDR146C TY1B-DR3Q99231 1755 aa-0.1□□□□□ -2.43
SWI5YDR146C SWR1Q05471 1514 aa-0.11□□□□□ -2.43
SWI5YDR146C MOT1P32333 1867 aa-0.11□□□□□ -2.43
SWI5YDR146C ECM29P38737 1868 aa-0.11□□□□□ -2.43
SWI5YDR146C YOR343CQ12484 108 aa-0.11□□□□□ -2.43
SWI5YDR146C YDR182W-AQ3E796 67 aa-0.11□□□□□ -2.43
SWI5YDR146C NOP10Q6Q547 58 aaPredicted RBP-0.11□□□□□ -2.43
SWI5YDR146C LSM2P38203 95 aaKnown RBP-0.11□□□□□ -2.43
SWI5YDR146C OLI1P61829 76 aa-0.11□□□□□ -2.43
SWI5YDR146C ZEO1Q08245 113 aa-0.11□□□□□ -2.43
SWI5YDR146C YOR105WQ08504 108 aa-0.11□□□□□ -2.43
SWI5YDR146C POC4Q12245 148 aaPredicted RBP-0.11□□□□□ -2.43
SWI5YDR146C YKL065W-AQ2V2P2 73 aa-0.11□□□□□ -2.43
SWI5YDR146C YIL156W-BQ2V2P4 73 aa-0.11□□□□□ -2.43
SWI5YDR146C YCL001W-BQ96VH2 84 aa-0.11□□□□□ -2.43
SWI5YDR146C VTH1P40438 1549 aa-0.12□□□□□ -2.43
SWI5YDR146C VTH2P40890 1549 aa-0.12□□□□□ -2.43
SWI5YDR146C TY2B-LR1P0C2J3 1770 aa-0.12□□□□□ -2.43
SWI5YDR146C TY2B-FP0CX63 1770 aa-0.12□□□□□ -2.43
SWI5YDR146C TY2B-GR2P0CX64 1770 aa-0.12□□□□□ -2.43
SWI5YDR146C TY2B-CP25384 1770 aa-0.12□□□□□ -2.43
SWI5YDR146C TY2B-DR2Q03494 1770 aa-0.12□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 28.8 ms