RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 C17orf102A2RUQ5 167 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 FAM47DPA6NHR8 397 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 F8VP50 259 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 DNALI1O14645 258 aaPredicted RBP14.95□□□□□ -0.02
RANBP3-229ENST00000592771 PRPF4O43172 522 aaKnown RBP eCLIP14.95□□□□□ -0.021e-6■■■□□ 16.3
RANBP3-229ENST00000592771 DUSP11O75319 330 aaKnown RBP14.95□□□□□ -0.02
RANBP3-229ENST00000592771 TJP3O95049 919 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 GPD2P43304 727 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 CRYBB1P53674 252 aaPredicted RBP14.95□□□□□ -0.02
RANBP3-229ENST00000592771 YARSP54577 528 aaKnown RBP14.95□□□□□ -0.02
RANBP3-229ENST00000592771 MYO1EQ12965 1108 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 LRRC14Q15048 493 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 XKR4Q5GH76 650 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 UBXN11Q5T124 520 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 CYP4F22Q6NT55 531 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 XYLT1Q86Y38 959 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 ANKRD42Q8N9B4 389 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 TRPV1Q8NER1 839 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 MGARPQ8TDB4 240 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 MAML1Q92585 1016 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 TSPAN18Q96SJ8 248 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 NXF3Q9H4D5 531 aaKnown RBP14.95□□□□□ -0.02
RANBP3-229ENST00000592771 CXorf56Q9H5V9 222 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 ARHGEF3Q9NR81 526 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 TJP2Q9UDY2 1190 aa14.95□□□□□ -0.02
RANBP3-229ENST00000592771 SMG5Q9UPR3 1016 aaKnown RBP14.95□□□□□ -0.02
RANBP3-229ENST00000592771 KPNA6O60684 536 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 RECQL4O94761 1208 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 ERBB2P04626 1255 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 GNAT1P11488 350 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 TCF4P15884 667 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 CYP3A5P20815 502 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 TM4SF4P48230 202 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 NFX1Q12986 1120 aaKnown RBP14.94□□□□□ -0.02
RANBP3-229ENST00000592771 MORF4L2Q15014 288 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 TRIP13Q15645 432 aaPredicted RBP14.94□□□□□ -0.02
RANBP3-229ENST00000592771 CCDC142Q17RM4 750 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 LCLAT1Q6UWP7 414 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 TBC1D1Q86TI0 1168 aaPredicted RBP14.94□□□□□ -0.02
RANBP3-229ENST00000592771 BEST2Q8NFU1 509 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 MCRS1Q96EZ8 462 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 RBM15Q96T37 977 aaKnown RBP eCLIP14.94□□□□□ -0.02
RANBP3-229ENST00000592771 NT5C1AQ9BXI3 368 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 FRMD8P1Q9BZ68 369 aaPredicted RBP14.94□□□□□ -0.02
RANBP3-229ENST00000592771 EBF2Q9HAK2 575 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 TUBGCP4Q9UGJ1 667 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 FETUBQ9UGM5 382 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 BAIAP2L1Q9UHR4 511 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 STARD13Q9Y3M8 1113 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 PPEF2O14830 753 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 LIASO43766 372 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 KRT3P12035 628 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 CCNB1P14635 433 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 CREB1P16220 341 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 CCND1P24385 295 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 ELF1P32519 619 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 RFC1P35251 1148 aaPredicted RBP14.94□□□□□ -0.02
RANBP3-229ENST00000592771 PSMC1P62191 440 aaKnown RBP14.94□□□□□ -0.02
RANBP3-229ENST00000592771 MPP2Q14168 576 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 STILQ15468 1287 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 DEFB115Q30KQ5 88 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 SPDYAQ5MJ70 313 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 GSTA5Q7RTV2 222 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 POLNQ7Z5Q5 900 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 KLHL29Q96CT2 875 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 HEXIM2Q96MH2 286 aaKnown RBP14.94□□□□□ -0.02
RANBP3-229ENST00000592771 SLITRK1Q96PX8 696 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 SSU72Q9NP77 194 aaKnown RBP14.94□□□□□ -0.02
RANBP3-229ENST00000592771 CREBZFQ9NS37 354 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 DDX56Q9NY93 547 aaKnown RBP14.94□□□□□ -0.02
RANBP3-229ENST00000592771 CTNNAL1Q9UBT7 734 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 UBQLN1Q9UMX0 589 aaKnown RBP14.94□□□□□ -0.02
RANBP3-229ENST00000592771 HES2Q9Y543 173 aa14.94□□□□□ -0.02
RANBP3-229ENST00000592771 RASA4BC9J798 803 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 M0QYV0 167 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 RASA4O43374 803 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 CA12O43570 354 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 CYBAP13498 195 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 KCNE1P15382 129 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 TAC1P20366 129 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 GJA9P57773 515 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 NKX3-2P78367 333 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 LLGL1Q15334 1064 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 ATP13A4Q4VNC1 1196 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 C9orf57Q5W0N0 161 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 ASRGL1Q7L266 308 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 PCGF5Q86SE9 256 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 TRABD2AQ86V40 505 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 SRRM1Q8IYB3 904 aaKnown RBP14.93□□□□□ -0.02
RANBP3-229ENST00000592771 CYP4X1Q8N118 509 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 ALLCQ8N6M5 410 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 JOSD2Q8TAC2 188 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 FBF1Q8TES7 1133 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 HHIPL1Q96JK4 782 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 HEMGNQ9BXL5 484 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 UPF3AQ9H1J1 476 aaKnown RBP14.93□□□□□ -0.02
RANBP3-229ENST00000592771 SLC24A2Q9UI40 661 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 PIN4Q9Y237 131 aaKnown RBP14.93□□□□□ -0.02
RANBP3-229ENST00000592771 EFR3BQ9Y2G0 817 aa14.93□□□□□ -0.02
RANBP3-229ENST00000592771 MYADML2A6NDP7 307 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms