RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 AZI2Q9H6S1 392 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 TBC1D17Q9HA65 648 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 RGS18Q9NS28 235 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 ZBTB40Q9NUA8 1239 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 GMEB2Q9UKD1 530 aa6.93□□□□□ -1.3
CCDC6-203ENST00000518638 CEP250Q9BV73 2442 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 DOCK5Q9H7D0 1870 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 MIA3Q5JRA6 1907 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.92□□□□□ -1.3
CCDC6-203ENST00000518638 LAMTOR5O43504 91 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 TBC1D4O60343 1298 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 LRP3O75074 770 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 CLASP2O75122 1294 aaKnown RBP6.92□□□□□ -1.3
CCDC6-203ENST00000518638 MARK3P27448 753 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 HOXA13P31271 388 aaPredicted RBP6.92□□□□□ -1.3
CCDC6-203ENST00000518638 SLC6A11P48066 632 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 ALDH7A1P49419 539 aaKnown RBP6.92□□□□□ -1.3
CCDC6-203ENST00000518638 GATMP50440 423 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 SLC26A2P50443 739 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 POLGP54098 1239 aaPredicted RBP6.92□□□□□ -1.3
CCDC6-203ENST00000518638 GABREP78334 506 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 SP4Q02446 784 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 FILIP1Q7Z7B0 1213 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 GPR149Q86SP6 731 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 DCLK2Q8N568 766 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 PJA1Q8NG27 643 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 IL31RAQ8NI17 732 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 MZB1Q8WU39 189 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 ADAM2Q99965 735 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 FAM126AQ9BYI3 521 aaPredicted RBP6.92□□□□□ -1.3
CCDC6-203ENST00000518638 RHOBTB2Q9BYZ6 727 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 EPC1Q9H2F5 836 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 CDIP1Q9H305 208 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 CWH43Q9H720 699 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 JMJD4Q9H9V9 463 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 ARHGEF3Q9NR81 526 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 HELLSQ9NRZ9 838 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 ANGPTL2Q9UKU9 493 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 RAB23Q9ULC3 237 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 USP18Q9UMW8 372 aa6.92□□□□□ -1.3
CCDC6-203ENST00000518638 COA3Q9Y2R0 106 aaPredicted RBP6.92□□□□□ -1.3
CCDC6-203ENST00000518638 ZFHX4Q86UP3 3567 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 VPS13AQ96RL7 3174 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 K7ESM1 405 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 AQP7O14520 342 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 FOXP2O15409 715 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 MAFGO15525 162 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 FGAP02671 866 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 PRR5P85299 388 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 SQSTM1Q13501 440 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 KIZQ2M2Z5 673 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 LETM2Q2VYF4 491 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 MARCH8Q5T0T0 291 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 FAM102BQ5T8I3 360 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 CCDC181Q5TID7 509 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 TMEFF1Q8IYR6 380 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 SLC39A11Q8N1S5 342 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 CUL5Q93034 780 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 MTMR8Q96EF0 704 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 OSBPL6Q9BZF3 934 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 CPVLQ9H3G5 476 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 TMX1Q9H3N1 280 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 RXFP1Q9HBX9 757 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 VAT1LQ9HCJ6 419 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 DLGAP2Q9P1A6 1054 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 CDH22Q9UJ99 828 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 TRAF6Q9Y4K3 522 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 LAMA4Q16363 1823 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 BAHCC1Q9P281 2608 aa6.91□□□□□ -1.3
CCDC6-203ENST00000518638 MAP1BP46821 2468 aaKnown RBP6.9□□□□□ -1.3
CCDC6-203ENST00000518638 PATJQ8NI35 1801 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 ZNF292O60281 2723 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 KLRF2D3W0D1 207 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 OVOL3O00110 214 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 SLC30A4O14863 429 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 NCAM2O15394 837 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 DNAJC6O75061 913 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 CXCL14O95715 111 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 DCNP07585 359 aaKnown RBP6.9□□□□□ -1.3
CCDC6-203ENST00000518638 CTSAP10619 480 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 ZSCAN20P17040 1043 aaPredicted RBP6.9□□□□□ -1.3
CCDC6-203ENST00000518638 TNFRSF1AP19438 455 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 CDR1P51861 262 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 MRPS9P82933 396 aaKnown RBP6.9□□□□□ -1.3
CCDC6-203ENST00000518638 SHC2P98077 582 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 SLC9A5Q14940 896 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 SPECC1Q5M775 1068 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 DCLRE1AQ6PJP8 1040 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 TMC5Q6UXY8 1006 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 PLPPR4Q7Z2D5 763 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 CMASQ8NFW8 434 aaPredicted RBP6.9□□□□□ -1.3
CCDC6-203ENST00000518638 SEC14L1Q92503 715 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 UBAC1Q9BSL1 405 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 ZBP1Q9H171 429 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 EPB41L1Q9H4G0 881 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 SLC2A4RGQ9NR83 387 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 ZSCAN32Q9NX65 697 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 EPS15L1Q9UBC2 864 aa6.9□□□□□ -1.3
CCDC6-203ENST00000518638 PPARGC1AQ9UBK2 798 aaKnown RBP6.9□□□□□ -1.3
CCDC6-203ENST00000518638 CA14Q9ULX7 337 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms