RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ENGASEQ8NFI3 743 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 OXER1Q8TDS5 423 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 TTC9Q92623 222 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 KIFAP3Q92845 792 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 MED8Q96G25 268 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 NRSN2Q9GZP1 204 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 TUFT1Q9NNX1 390 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 TMLHEQ9NVH6 421 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 ANKMY1Q9P2S6 941 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 FTSJ1Q9UET6 329 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 PCDHB5Q9Y5E4 795 aa13.5□□□□□ -0.25
LSM6-204ENST00000504181 CKAP5Q14008 2032 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 LRRK2Q5S007 2527 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 TBC1D3BA6NDS4 549 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 BCAT2O15382 392 aaPredicted RBP13.49□□□□□ -0.25
LSM6-204ENST00000504181 NOL4O94818 638 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 ADH5P11766 374 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 PDIA3P30101 505 aaKnown RBP13.49□□□□□ -0.25
LSM6-204ENST00000504181 NTSR1P30989 418 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 ACTN2P35609 894 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 PEX3P56589 373 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 SMARCB1Q12824 385 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 SAFBQ15424 915 aaKnown RBP eCLIP13.49□□□□□ -0.25
LSM6-204ENST00000504181 SF3A1Q15459 793 aaKnown RBP13.49□□□□□ -0.25
LSM6-204ENST00000504181 TSGA10IPQ3SY00 556 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 DCAF12L1Q5VU92 463 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 RHBDF2Q6PJF5 856 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 USP49Q70CQ1 688 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 ERICH1Q86X53 443 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 THEM5Q8N1Q8 247 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 IPO4Q8TEX9 1081 aaKnown RBP13.49□□□□□ -0.25
LSM6-204ENST00000504181 TRMT2BQ96GJ1 504 aaKnown RBP13.49□□□□□ -0.25
LSM6-204ENST00000504181 GPR174Q9BXC1 333 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 TMEM134Q9H6X4 195 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 HCN2Q9UL51 889 aa13.49□□□□□ -0.25
LSM6-204ENST00000504181 TTC26A0AVF1 554 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.48□□□□□ -0.25
LSM6-204ENST00000504181 TRIM66O15016 1216 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 ADH1CP00326 375 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 CD6P30203 668 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 NPTX2P47972 431 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 PPP2R3AQ06190 1150 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 AAMPQ13685 434 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 C10orf76Q5T2E6 689 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 HES3Q5TGS1 186 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 BROXQ5VW32 411 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 METTL23Q86XA0 190 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 DCP1BQ8IZD4 617 aaKnown RBP13.48□□□□□ -0.25
LSM6-204ENST00000504181 NAT16Q8N8M0 369 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 FSIP1Q8NA03 581 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 TOE1Q96GM8 510 aaKnown RBP13.48□□□□□ -0.25
LSM6-204ENST00000504181 MYRFLQ96LU7 910 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 ACOX2Q99424 681 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 CD248Q9HCU0 757 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 EIF2B4Q9UI10 523 aaKnown RBP13.48□□□□□ -0.25
LSM6-204ENST00000504181 HEMK1Q9Y5R4 338 aaPredicted RBP13.48□□□□□ -0.25
LSM6-204ENST00000504181 SNX11Q9Y5W9 270 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 RAD54BQ9Y620 910 aa13.48□□□□□ -0.25
LSM6-204ENST00000504181 DOPEY1Q5JWR5 2465 aa13.47□□□□□ -0.25
LSM6-204ENST00000504181 CBX4O00257 560 aa13.47□□□□□ -0.25
LSM6-204ENST00000504181 KCNK3O14649 394 aa13.47□□□□□ -0.25
LSM6-204ENST00000504181 XPOTO43592 962 aaKnown RBP13.47□□□□□ -0.25
LSM6-204ENST00000504181 MATR3P43243 847 aaKnown RBP eCLIP13.47□□□□□ -0.25
LSM6-204ENST00000504181 CSNK1EP49674 416 aaKnown RBP13.47□□□□□ -0.25
LSM6-204ENST00000504181 IL9RQ01113 521 aa13.47□□□□□ -0.25
LSM6-204ENST00000504181 TBC1D25Q3MII6 688 aa13.47□□□□□ -0.25
LSM6-204ENST00000504181 EGFLAMQ63HQ2 1017 aa13.47□□□□□ -0.25
LSM6-204ENST00000504181 FAM177A1Q8N128 213 aaPredicted RBP13.47□□□□□ -0.25
LSM6-204ENST00000504181 ZFRQ96KR1 1074 aaKnown RBP13.47□□□□□ -0.25
LSM6-204ENST00000504181 MRGPRX1Q96LB2 322 aa13.47□□□□□ -0.25
LSM6-204ENST00000504181 FAM117AQ9C073 453 aa13.47□□□□□ -0.25
LSM6-204ENST00000504181 PLEKHA5Q9HAU0 1116 aa13.47□□□□□ -0.25
LSM6-204ENST00000504181 GJB4Q9NTQ9 266 aa13.47□□□□□ -0.25
LSM6-204ENST00000504181 WSB2Q9NYS7 404 aaPredicted RBP13.47□□□□□ -0.25
LSM6-204ENST00000504181 DSEQ9UL01 958 aa13.47□□□□□ -0.25
LSM6-204ENST00000504181 NFE2L3Q9Y4A8 694 aa13.47□□□□□ -0.25
LSM6-204ENST00000504181 LACTBL1A8MY62 500 aa13.46□□□□□ -0.25
LSM6-204ENST00000504181 CYB561D2O14569 222 aa13.46□□□□□ -0.25
LSM6-204ENST00000504181 RFPL3O75679 317 aa13.46□□□□□ -0.25
LSM6-204ENST00000504181 NFICP08651 508 aa13.46□□□□□ -0.25
LSM6-204ENST00000504181 GP1BBP13224 206 aa13.46□□□□□ -0.25
LSM6-204ENST00000504181 CYP2F1P24903 491 aa13.46□□□□□ -0.25
LSM6-204ENST00000504181 RPL10AP62906 217 aaKnown RBP13.46□□□□□ -0.25
LSM6-204ENST00000504181 DNAJC3Q13217 504 aa13.46□□□□□ -0.25
LSM6-204ENST00000504181 KIF19Q2TAC6 998 aa13.46□□□□□ -0.25
LSM6-204ENST00000504181 LY6G5CQ5SRR4 150 aa13.46□□□□□ -0.25
LSM6-204ENST00000504181 C6orf132Q5T0Z8 1188 aa13.46□□□□□ -0.25
LSM6-204ENST00000504181 WSCD1Q658N2 575 aa13.46□□□□□ -0.25
LSM6-204ENST00000504181 CHPFQ8IZ52 775 aa13.46□□□□□ -0.25
LSM6-204ENST00000504181 KCNV2Q8TDN2 545 aa13.46□□□□□ -0.25
LSM6-204ENST00000504181 JAKMIP1Q96N16 626 aaKnown RBP13.46□□□□□ -0.25
LSM6-204ENST00000504181 PYM1Q9BRP8 204 aaKnown RBP13.46□□□□□ -0.25
LSM6-204ENST00000504181 KMT5AQ9NQR1 393 aa13.46□□□□□ -0.25
LSM6-204ENST00000504181 SMPD4Q9NXE4 827 aa13.46□□□□□ -0.25
LSM6-204ENST00000504181 ARHGAP28Q9P2N2 729 aa13.46□□□□□ -0.25
LSM6-204ENST00000504181 CREBBPQ92793 2442 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 WNT7AO00755 349 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 ENC1O14682 589 aa13.45□□□□□ -0.26
LSM6-204ENST00000504181 SLC9A3R1O14745 358 aaPredicted RBP13.45□□□□□ -0.26
LSM6-204ENST00000504181 CPLX1O14810 134 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms