RNA–Protein interactions for RNA: ENST00000478743.1

HDAC8-217, Transcript of histone deacetylase 8, humanhuman

TSL 4

Gene HDAC8, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-217ENST00000478743 MYF5P13349 255 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 GRK6P43250 576 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 TNFRSF4P43489 277 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 TMPRSS3P57727 454 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 PPP2R5AQ15172 486 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 SF3A1Q15459 793 aaKnown RBP13.19□□□□□ -0.3
HDAC8-217ENST00000478743 C6orf132Q5T0Z8 1188 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 C10orf76Q5T2E6 689 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 ETFBKMTQ8IXQ9 262 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 NAT16Q8N8M0 369 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 TOE1Q96GM8 510 aaKnown RBP13.19□□□□□ -0.3
HDAC8-217ENST00000478743 MRPL4Q9BYD3 311 aaKnown RBP13.19□□□□□ -0.3
HDAC8-217ENST00000478743 TRIM9Q9C026 710 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 HSPBP1Q9NZL4 362 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 FTSJ1Q9UET6 329 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 EIF2B4Q9UI10 523 aaKnown RBP13.19□□□□□ -0.3
HDAC8-217ENST00000478743 PCDHA12Q9UN75 941 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 PLXNA2O75051 1894 aa13.19□□□□□ -0.3
HDAC8-217ENST00000478743 NUMA1Q14980 2115 aa13.18□□□□□ -0.3
HDAC8-217ENST00000478743 TTC26A0AVF1 554 aa13.18□□□□□ -0.3
HDAC8-217ENST00000478743 H0Y8X5 98 aa13.18□□□□□ -0.3
HDAC8-217ENST00000478743 PRPF40AO75400 957 aaKnown RBP13.18□□□□□ -0.3
HDAC8-217ENST00000478743 XRCC6P12956 609 aaKnown RBP eCLIP13.18□□□□□ -0.3
HDAC8-217ENST00000478743 CYP2F1P24903 491 aa13.18□□□□□ -0.3
HDAC8-217ENST00000478743 CD6P30203 668 aa13.18□□□□□ -0.3
HDAC8-217ENST00000478743 NTSR1P30989 418 aa13.18□□□□□ -0.3
HDAC8-217ENST00000478743 HNF1BP35680 557 aa13.18□□□□□ -0.3
HDAC8-217ENST00000478743 EIF2DP41214 584 aaKnown RBP13.18□□□□□ -0.3
HDAC8-217ENST00000478743 TXKP42681 527 aa13.18□□□□□ -0.3
HDAC8-217ENST00000478743 NPTX2P47972 431 aa13.18□□□□□ -0.3
HDAC8-217ENST00000478743 KCNB1Q14721 858 aa13.18□□□□□ -0.3
HDAC8-217ENST00000478743 NOLC1Q14978 699 aaKnown RBP eCLIP13.18□□□□□ -0.3
HDAC8-217ENST00000478743 LY6G5CQ5SRR4 150 aa13.18□□□□□ -0.3
HDAC8-217ENST00000478743 FBXL19Q6PCT2 694 aa13.18□□□□□ -0.3
HDAC8-217ENST00000478743 DAW1Q8N136 415 aa13.18□□□□□ -0.3
HDAC8-217ENST00000478743 EXD3Q8N9H8 876 aa13.18□□□□□ -0.3
HDAC8-217ENST00000478743 TRMT2BQ96GJ1 504 aaKnown RBP13.18□□□□□ -0.3
HDAC8-217ENST00000478743 TCHPQ9BT92 498 aa13.18□□□□□ -0.3
HDAC8-217ENST00000478743 SMPD4Q9NXE4 827 aa13.18□□□□□ -0.3
HDAC8-217ENST00000478743 WSB2Q9NYS7 404 aaPredicted RBP13.18□□□□□ -0.3
HDAC8-217ENST00000478743 LRRK2Q5S007 2527 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 ARHGEF35A5YM69 484 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 TBC1D3BA6NDS4 549 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 CCDC169A6NNP5 214 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 LACTBL1A8MY62 500 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 WASH3PC4AMC7 463 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 RFPL3O75679 317 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 BAG4O95429 457 aaKnown RBP13.17□□□□□ -0.3
HDAC8-217ENST00000478743 HDCP19113 662 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 PDIA3P30101 505 aaKnown RBP13.17□□□□□ -0.3
HDAC8-217ENST00000478743 ACADVLP49748 655 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 PEX3P56589 373 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 CALCRLQ16602 461 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 ECM1Q16610 540 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 WSCD1Q658N2 575 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 IL27RAQ6UWB1 636 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 GATAD2AQ86YP4 633 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 TERB1Q8NA31 727 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 C2orf15Q8WU43 125 aaKnown RBP13.17□□□□□ -0.3
HDAC8-217ENST00000478743 IFT74Q96LB3 600 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 MYRFLQ96LU7 910 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 RNF38Q9H0F5 515 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 ARHGAP28Q9P2N2 729 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 UBQLN1Q9UMX0 589 aaKnown RBP13.17□□□□□ -0.3
HDAC8-217ENST00000478743 PAXBP1Q9Y5B6 917 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 PCDHB5Q9Y5E4 795 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 NOTCH2Q04721 2471 aa13.17□□□□□ -0.3
HDAC8-217ENST00000478743 DOPEY1Q5JWR5 2465 aa13.16□□□□□ -0.3
HDAC8-217ENST00000478743 ENC1O14682 589 aa13.16□□□□□ -0.3
HDAC8-217ENST00000478743 HCRTO43612 131 aa13.16□□□□□ -0.3
HDAC8-217ENST00000478743 TULP3O75386 442 aa13.16□□□□□ -0.3
HDAC8-217ENST00000478743 CYP3A5P20815 502 aa13.16□□□□□ -0.3
HDAC8-217ENST00000478743 ACTN2P35609 894 aa13.16□□□□□ -0.3
HDAC8-217ENST00000478743 SSRP1Q08945 709 aaKnown RBP13.16□□□□□ -0.3
HDAC8-217ENST00000478743 C9orf57Q5W0N0 161 aa13.16□□□□□ -0.3
HDAC8-217ENST00000478743 HIC2Q96JB3 615 aa13.16□□□□□ -0.3
HDAC8-217ENST00000478743 TMEM60Q9H2L4 133 aa13.16□□□□□ -0.3
HDAC8-217ENST00000478743 USP36Q9P275 1121 aaKnown RBP13.16□□□□□ -0.3
HDAC8-217ENST00000478743 CPQQ9Y646 472 aa13.16□□□□□ -0.3
HDAC8-217ENST00000478743 AHCTF1Q8WYP5 2266 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 METTL12A8MUP2 240 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 TRAK2O60296 914 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 DEXIO95424 95 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 NFICP08651 508 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 CCT8P50990 548 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 USP46P62068 366 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 NR5A1Q13285 461 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 TSGA10IPQ3SY00 556 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 ZNF574Q6ZN55 896 aaPredicted RBP13.15□□□□□ -0.3
HDAC8-217ENST00000478743 CACUL1Q86Y37 369 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 GABRG3Q99928 467 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 PYM1Q9BRP8 204 aaKnown RBP13.15□□□□□ -0.3
HDAC8-217ENST00000478743 TMEM134Q9H6X4 195 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 TUFT1Q9NNX1 390 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 CFAP97Q9P2B7 532 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 UXTQ9UBK9 157 aaPredicted RBP13.15□□□□□ -0.3
HDAC8-217ENST00000478743 NFE2L3Q9Y4A8 694 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 PCDHB1Q9Y5F3 818 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 PCDHGA1Q9Y5H4 931 aa13.15□□□□□ -0.3
HDAC8-217ENST00000478743 HEMK1Q9Y5R4 338 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms