RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 NCKAP1LP55160 1127 aa13.98□□□□□ -0.17
USP42-203ENST00000426246 DUOXA2Q1HG44 320 aa13.98□□□□□ -0.17
USP42-203ENST00000426246 EEF1DP3Q658K8 133 aa13.98□□□□□ -0.17
USP42-203ENST00000426246 BRI3BPQ8WY22 251 aa13.98□□□□□ -0.17
USP42-203ENST00000426246 SEC14L1Q92503 715 aa13.98□□□□□ -0.17
USP42-203ENST00000426246 TSSK1BQ9BXA7 367 aa13.98□□□□□ -0.17
USP42-203ENST00000426246 RRAGCQ9HB90 399 aa13.98□□□□□ -0.17
USP42-203ENST00000426246 MCM8Q9UJA3 840 aa13.98□□□□□ -0.17
USP42-203ENST00000426246 GRID1Q9ULK0 1009 aa13.98□□□□□ -0.17
USP42-203ENST00000426246 SLC45A1Q9Y2W3 748 aa13.98□□□□□ -0.17
USP42-203ENST00000426246 CCDC160A6NGH7 325 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 COPEO14579 308 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 DNALI1O14645 258 aaPredicted RBP13.97□□□□□ -0.17
USP42-203ENST00000426246 UGT1A9O60656 530 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 ZBED1O96006 694 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 OSBPP22059 807 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 IVDP26440 423 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 PHBP35232 272 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 RABGGTBP53611 331 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 RCN1Q15293 331 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 TFDP3Q5H9I0 405 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 CAPRIN2Q6IMN6 1127 aaKnown RBP13.97□□□□□ -0.17
USP42-203ENST00000426246 POLNQ7Z5Q5 900 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 ZBTB8OSQ8IWT0 167 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 SCUBE3Q8IX30 993 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 TRIM11Q96F44 468 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 RAB3IPQ96QF0 476 aaPredicted RBP13.97□□□□□ -0.17
USP42-203ENST00000426246 UGT1A7Q9HAW7 530 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 UGT1A10Q9HAW8 530 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 UGT1A8Q9HAW9 530 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 CLEC11AQ9Y240 323 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 USH1CQ9Y6N9 552 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 CITO14578 2027 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 BTBD19C9JJ37 291 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 SMIM24O75264 130 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 VTNP04004 478 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 SUPT20HL2P0C7V6 817 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 MYL2P10916 166 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 NCF2P19878 526 aaPredicted RBP13.97□□□□□ -0.17
USP42-203ENST00000426246 ADORA2BP29275 332 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 SLC1A1P43005 524 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 PLCB4Q15147 1175 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 CST9Q5W186 159 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 BBOF1Q8ND07 529 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 THTPAQ9BU02 230 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 TIPINQ9BVW5 301 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 TRIM55Q9BYV6 548 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 DHX35Q9H5Z1 703 aaKnown RBP13.97□□□□□ -0.17
USP42-203ENST00000426246 PSMC3IPQ9P2W1 217 aaPredicted RBP13.97□□□□□ -0.17
USP42-203ENST00000426246 HES2Q9Y543 173 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 PRPSAP2O60256 369 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 MGRN1O60291 552 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 IL1R2P27930 398 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 RPL22P35268 128 aaKnown RBP13.97□□□□□ -0.17
USP42-203ENST00000426246 FKBP1BP68106 108 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 PEX6Q13608 980 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 TRABD2AQ86V40 505 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 ALYREFQ86V81 257 aaKnown RBP13.97□□□□□ -0.17
USP42-203ENST00000426246 RCOR2Q8IZ40 523 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 UNC5BQ8IZJ1 945 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 EIF1ADQ8N9N8 165 aaKnown RBP13.97□□□□□ -0.17
USP42-203ENST00000426246 PTPN18Q99952 460 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 NRBP2Q9NSY0 501 aa13.97□□□□□ -0.17
USP42-203ENST00000426246 CFAP73A6NFT4 308 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 I3L4J1 428 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 ZMPSTE24O75844 475 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 OATP04181 439 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 PAEPP09466 180 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 GCNT1Q02742 428 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 MTFR1Q15390 333 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 ZC3H12AQ5D1E8 599 aaKnown RBP13.96□□□□□ -0.17
USP42-203ENST00000426246 MON1BQ7L1V2 547 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 FBXO16Q8IX29 292 aaPredicted RBP13.96□□□□□ -0.17
USP42-203ENST00000426246 B3GNT5Q9BYG0 378 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 MANSC1Q9H8J5 431 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 GEMIN8Q9NWZ8 242 aaKnown RBP13.96□□□□□ -0.17
USP42-203ENST00000426246 DLGAP2Q9P1A6 1054 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.96□□□□□ -0.17
USP42-203ENST00000426246 B2RBV5 119 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 GOLGA8TH3BQL2 631 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 LCP1P13796 627 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 ATXN1P54253 815 aaKnown RBP13.96□□□□□ -0.17
USP42-203ENST00000426246 THOC5Q13769 683 aaKnown RBP13.96□□□□□ -0.17
USP42-203ENST00000426246 CAPSQ13938 189 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 PTPN20Q4JDL3 420 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 CGB2Q6NT52 195 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 SHCBP1Q8NEM2 672 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 NDRG1Q92597 394 aaKnown RBP13.96□□□□□ -0.17
USP42-203ENST00000426246 PTPRN2Q92932 1015 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 ANKRD36BP1Q96IX9 119 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 FAM81BQ96LP2 452 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 APOL2Q9BQE5 337 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 MROH8Q9H579 483 aa13.96□□□□□ -0.17
USP42-203ENST00000426246 USP12O75317 370 aa13.96□□□□□ -0.18
USP42-203ENST00000426246 KRT36O76013 467 aa13.96□□□□□ -0.18
USP42-203ENST00000426246 PGGT1BP53609 377 aa13.96□□□□□ -0.18
USP42-203ENST00000426246 MCCD1P59942 119 aaPredicted RBP13.96□□□□□ -0.18
USP42-203ENST00000426246 PDE1BQ01064 536 aa13.96□□□□□ -0.18
USP42-203ENST00000426246 HSDL1Q3SXM5 330 aa13.96□□□□□ -0.18
USP42-203ENST00000426246 DCLK2Q8N568 766 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms