RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 PALB2Q86YC2 1186 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 GANCQ8TET4 914 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 RUBCNQ92622 972 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 CCDC68Q9H2F9 335 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.82□□□□□ -0.84
CCDC113-201ENST00000219299 AIPL1Q9NZN9 384 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 SIK3Q9Y2K2 1263 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 CNTNAP2Q9UHC6 1331 aa9.82□□□□□ -0.84
CCDC113-201ENST00000219299 PTK7Q13308 1070 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 HEATR6Q6AI08 1181 aaKnown RBP9.81□□□□□ -0.84
CCDC113-201ENST00000219299 CHSY1Q86X52 802 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 C12orf56Q8IXR9 622 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 YAF2Q8IY57 180 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 FIBCD1Q8N539 461 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 MRPS31Q92665 395 aaKnown RBP9.81□□□□□ -0.84
CCDC113-201ENST00000219299 PITPNM3Q9BZ71 974 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 R3HDMLQ9H3Y0 253 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 MINDY3Q9H8M7 445 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 CACYBPQ9HB71 228 aaKnown RBP9.81□□□□□ -0.84
CCDC113-201ENST00000219299 SH3BP1Q9Y3L3 701 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 SLC4A7Q9Y6M7 1214 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 NNMTP40261 264 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 MSH2P43246 934 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 BST2Q10589 180 aaKnown RBP9.81□□□□□ -0.84
CCDC113-201ENST00000219299 KCNMA1Q12791 1236 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 TUSC3Q13454 348 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 MMEL1Q495T6 779 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 KRT80Q6KB66 452 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 GDAP1Q8TB36 358 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 MFSD14AQ96MC6 490 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.81□□□□□ -0.84
CCDC113-201ENST00000219299 OSGEPQ9NPF4 335 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 WDR70Q9NW82 654 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 DDX60Q8IY21 1712 aaKnown RBP9.81□□□□□ -0.84
CCDC113-201ENST00000219299 CACNA1SQ13698 1873 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 TRIM66O15016 1216 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 ZNF185O15231 689 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 ACRP10323 421 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 GJA9P57773 515 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 PDCD2Q16342 344 aaPredicted RBP9.81□□□□□ -0.84
CCDC113-201ENST00000219299 KCNT1Q5JUK3 1230 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 FAM131BQ86XD5 332 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 SCUBE3Q8IX30 993 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 PDIK1LQ8N165 341 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 EDEM1Q92611 657 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 DTNBP1Q96EV8 351 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 MS4A14Q96JA4 679 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 ZNF518BQ9C0D4 1074 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 TUBGCP4Q9UGJ1 667 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 SNX12Q9UMY4 172 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 DNAJC25-GNG10A0A024R161 153 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 DFFAO00273 331 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 TLL1O43897 1013 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 SPAG7O75391 227 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 COBLL1Q53SF7 1204 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 NOP9Q86U38 636 aaKnown RBP9.81□□□□□ -0.84
CCDC113-201ENST00000219299 FAF2Q96CS3 445 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 ATP6V1G3Q96LB4 118 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 FZD8Q9H461 694 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 TRPM5Q9NZQ8 1165 aa9.81□□□□□ -0.84
CCDC113-201ENST00000219299 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.81□□□□□ -0.84
CCDC113-201ENST00000219299 CST3P01034 146 aaPredicted RBP9.8□□□□□ -0.84
CCDC113-201ENST00000219299 CYBBP04839 570 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 CCDC130P13994 396 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 MTFR1Q15390 333 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 OLFM3Q96PB7 478 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 PCYT2Q99447 389 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 TTC1Q99614 292 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 SP110Q9HB58 689 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 ASS1P00966 412 aaKnown RBP9.8□□□□□ -0.84
CCDC113-201ENST00000219299 MT-ND3P03897 115 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 EPHB2P29323 1055 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 CTNNB1P35222 781 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 HARS2P49590 506 aaKnown RBP9.8□□□□□ -0.84
CCDC113-201ENST00000219299 NUMBP49757 651 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 ADCY1Q08828 1119 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 ADIGQ0VDE8 80 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 EFEMP1Q12805 493 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 BEND6Q5SZJ8 279 aaPredicted RBP9.8□□□□□ -0.84
CCDC113-201ENST00000219299 PID1Q7Z2X4 250 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 TRIML2Q8N7C3 387 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 ZSWIM2Q8NEG5 633 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 SERPINI1Q99574 410 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 FAM118BQ9BPY3 351 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 C16orf70Q9BSU1 422 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 WDCPQ9H6R7 721 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 SF3B1O75533 1304 aaKnown RBP eCLIP9.8□□□□□ -0.84
CCDC113-201ENST00000219299 ADGRA3Q8IWK6 1321 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 GPC4O75487 556 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 CPP00450 1065 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 PTPN1P18031 435 aaKnown RBP9.8□□□□□ -0.84
CCDC113-201ENST00000219299 GRIK3Q13003 919 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 OSBPL8Q9BZF1 889 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 SCN9AQ15858 1988 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 ESYT3A0FGR9 886 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 DDX3XO00571 662 aaKnown RBP eCLIP9.8□□□□□ -0.84
CCDC113-201ENST00000219299 B4GALT4O60513 344 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 FGBP02675 491 aa9.8□□□□□ -0.84
CCDC113-201ENST00000219299 ZNF865P0CJ78 1059 aaPredicted RBP9.8□□□□□ -0.84
CCDC113-201ENST00000219299 ATP4AP20648 1035 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms