RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 DRG1Q9Y295 367 aaKnown RBP18.07■□□□□ 0.48
RABGGTA-201ENST00000216840 TDRD15B5MCY1 1934 aaKnown RBP18.07■□□□□ 0.48
RABGGTA-201ENST00000216840 ADCY8P40145 1251 aa18.07■□□□□ 0.48
RABGGTA-201ENST00000216840 RAB27AP51159 221 aa18.07■□□□□ 0.48
RABGGTA-201ENST00000216840 CLCNKBP51801 687 aa18.07■□□□□ 0.48
RABGGTA-201ENST00000216840 DMTNQ08495 405 aa18.07■□□□□ 0.48
RABGGTA-201ENST00000216840 BBS12Q6ZW61 710 aa18.07■□□□□ 0.48
RABGGTA-201ENST00000216840 HAUS1Q96CS2 278 aa18.07■□□□□ 0.48
RABGGTA-201ENST00000216840 SENP8Q96LD8 212 aa18.07■□□□□ 0.48
RABGGTA-201ENST00000216840 PABPC3Q9H361 631 aaKnown RBP18.07■□□□□ 0.48
RABGGTA-201ENST00000216840 CREBZFQ9NS37 354 aa18.07■□□□□ 0.48
RABGGTA-201ENST00000216840 NOD1Q9Y239 953 aa18.07■□□□□ 0.48
RABGGTA-201ENST00000216840 DNAH12Q6ZR08 3092 aa18.06■□□□□ 0.48
RABGGTA-201ENST00000216840 ACAT1P24752 427 aaKnown RBP18.06■□□□□ 0.48
RABGGTA-201ENST00000216840 VPS41P49754 854 aa18.06■□□□□ 0.48
RABGGTA-201ENST00000216840 ITGA8P53708 1063 aa18.06■□□□□ 0.48
RABGGTA-201ENST00000216840 VCPP55072 806 aaKnown RBP18.06■□□□□ 0.48
RABGGTA-201ENST00000216840 OASLQ15646 514 aaKnown RBP18.06■□□□□ 0.48
RABGGTA-201ENST00000216840 CDO1Q16878 200 aa18.06■□□□□ 0.48
RABGGTA-201ENST00000216840 CCDC142Q17RM4 750 aa18.06■□□□□ 0.48
RABGGTA-201ENST00000216840 KCTD16Q68DU8 428 aa18.06■□□□□ 0.48
RABGGTA-201ENST00000216840 GSTA5Q7RTV2 222 aa18.06■□□□□ 0.48
RABGGTA-201ENST00000216840 CCDC89Q8N998 374 aa18.06■□□□□ 0.48
RABGGTA-201ENST00000216840 RAET1EQ8TD07 263 aa18.06■□□□□ 0.48
RABGGTA-201ENST00000216840 CLEC4CQ8WTT0 213 aa18.06■□□□□ 0.48
RABGGTA-201ENST00000216840 NKD2Q969F2 451 aaPredicted RBP18.06■□□□□ 0.48
RABGGTA-201ENST00000216840 HNRNPABQ99729 332 aaKnown RBP18.06■□□□□ 0.48
RABGGTA-201ENST00000216840 ZNF148Q9UQR1 794 aa18.06■□□□□ 0.48
RABGGTA-201ENST00000216840 CST8O60676 142 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 ENDOD1O94919 500 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 PTPN1P18031 435 aaKnown RBP18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 SDC4P31431 198 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 ACADSBP45954 432 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 ATP11AP98196 1134 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 SLMAPQ14BN4 828 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 PRUNE1Q86TP1 453 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 FUKQ8N0W3 1084 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 SH2D3CQ8N5H7 860 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 ALLCQ8N6M5 410 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 C3orf58Q8NDZ4 430 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 SLC35B2Q8TB61 432 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 PXYLP1Q8TE99 480 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 HSFY1Q96LI6 401 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 SEMA4AQ9H3S1 761 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 AAASQ9NRG9 546 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 A0A0U1RQF3 1178 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 PRPSAP2O60256 369 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 RARGP13631 454 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 LCP1P13796 627 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 SCNN1AP37088 669 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 LMAN1P49257 510 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 ARSEP51690 589 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 DYNLT1P63172 113 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 CAV1Q03135 178 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 KIAA0319Q5VV43 1072 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 SLC26A9Q7LBE3 791 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 FAM172AQ8WUF8 416 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 ATP6V1G3Q96LB4 118 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 ADAM2Q99965 735 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 DUSP16Q9BY84 665 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 ANAPC5Q9UJX4 755 aa18.05■□□□□ 0.48
RABGGTA-201ENST00000216840 CASTOR2A6NHX0 329 aa18.04■□□□□ 0.48
RABGGTA-201ENST00000216840 GOLGA6L10A6NI86 522 aa18.04■□□□□ 0.48
RABGGTA-201ENST00000216840 XPO1O14980 1071 aaKnown RBP18.04■□□□□ 0.48
RABGGTA-201ENST00000216840 ITGAVP06756 1048 aa18.04■□□□□ 0.48
RABGGTA-201ENST00000216840 NUDT17P0C025 328 aa18.04■□□□□ 0.48
RABGGTA-201ENST00000216840 MYZAPP0CAP1 466 aa18.04■□□□□ 0.48
RABGGTA-201ENST00000216840 RPL9P32969 192 aaKnown RBP18.04■□□□□ 0.48
RABGGTA-201ENST00000216840 PAQR9Q6ZVX9 377 aa18.04■□□□□ 0.48
RABGGTA-201ENST00000216840 ZNF771Q7L3S4 317 aaPredicted RBP18.04■□□□□ 0.48
RABGGTA-201ENST00000216840 GLIS1Q8NBF1 620 aa18.04■□□□□ 0.48
RABGGTA-201ENST00000216840 RNF169Q8NCN4 708 aa18.04■□□□□ 0.48
RABGGTA-201ENST00000216840 ACTL9Q8TC94 416 aa18.04■□□□□ 0.48
RABGGTA-201ENST00000216840 RSAD1Q9HA92 442 aa18.04■□□□□ 0.48
RABGGTA-201ENST00000216840 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.04■□□□□ 0.48
RABGGTA-201ENST00000216840 SAE1Q9UBE0 346 aaPredicted RBP18.04■□□□□ 0.48
RABGGTA-201ENST00000216840 FRMPD3Q5JV73 1810 aa18.04■□□□□ 0.48
RABGGTA-201ENST00000216840 CLDN5O00501 218 aa18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 CAPN15O75808 1086 aa18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 CHKAP35790 457 aa18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 CDH6P55285 790 aa18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 EIF3BP55884 814 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 OTUD4Q01804 1114 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 UPP1Q16831 310 aa18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 UBAP2Q5T6F2 1119 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 DENND2CQ68D51 928 aa18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 ARCQ7LC44 396 aa18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 RFX6Q8HWS3 928 aa18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 TMEM86AQ8N2M4 240 aa18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 TTC13Q8NBP0 860 aa18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 BBOF1Q8ND07 529 aa18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 PAAF1Q9BRP4 392 aa18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 FRMD8P1Q9BZ68 369 aaPredicted RBP18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 LRRC4CQ9HCJ2 640 aa18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 NGRNQ9NPE2 291 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 DDX43Q9NXZ2 648 aaKnown RBP18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 MOXD2PA6NHM9 499 aa18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 HMGB1P1B2RPK0 211 aaPredicted RBP18.03■□□□□ 0.48
RABGGTA-201ENST00000216840 PTPN9P43378 593 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms