RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C VMA7P39111 118 aa1.18□□□□□ -2.22
CTK2YJL006C YAL064WP39711 94 aa1.18□□□□□ -2.22
CTK2YJL006C YFL051CP43552 160 aa1.18□□□□□ -2.22
CTK2YJL006C DCV1P43595 202 aa1.18□□□□□ -2.22
CTK2YJL006C RPL37BP51402 88 aaKnown RBP1.18□□□□□ -2.22
CTK2YJL006C MHF1Q3E835 90 aa1.18□□□□□ -2.22
CTK2YJL006C SFT2P38166 215 aa1.17□□□□□ -2.22
CTK2YJL006C SAE3P89114 91 aa1.17□□□□□ -2.22
CTK2YJL006C SED1Q01589 338 aa1.17□□□□□ -2.22
CTK2YJL006C FRQ1Q06389 190 aa1.17□□□□□ -2.22
CTK2YJL006C LCL2Q08045 131 aa1.17□□□□□ -2.22
CTK2YJL006C WIP1Q2V2P8 89 aa1.17□□□□□ -2.22
CTK2YJL006C RPL33AP05744 107 aaKnown RBP1.16□□□□□ -2.22
CTK2YJL006C FUN14P18411 198 aa1.16□□□□□ -2.22
CTK2YJL006C ANB1P19211 157 aa1.16□□□□□ -2.22
CTK2YJL006C SRL3P36167 246 aa1.16□□□□□ -2.22
CTK2YJL006C ATG8P38182 117 aaRIP-Chip data1.16□□□□□ -2.22not detected
CTK2YJL006C YGL149WP53116 101 aa1.16□□□□□ -2.22
CTK2YJL006C AIM11P87275 137 aa1.16□□□□□ -2.22
CTK2YJL006C YPL067CQ02754 198 aa1.16□□□□□ -2.22
CTK2YJL006C CDC39P25655 2108 aaKnown RBP1.15□□□□□ -2.23
CTK2YJL006C PAU21P0CE86 164 aa1.15□□□□□ -2.23
CTK2YJL006C PAU22P0CE87 164 aa1.15□□□□□ -2.23
CTK2YJL006C HAP3P13434 144 aa1.15□□□□□ -2.23
CTK2YJL006C HSP10P38910 106 aa1.15□□□□□ -2.23
CTK2YJL006C YAR064WP39563 99 aa1.15□□□□□ -2.23
CTK2YJL006C BRP1P53194 125 aa1.15□□□□□ -2.23
CTK2YJL006C SEN15Q04675 128 aa1.15□□□□□ -2.23
CTK2YJL006C YLR118CQ12354 227 aa1.15□□□□□ -2.23
CTK2YJL006C YLR099W-AQ3E798 87 aa1.15□□□□□ -2.23
CTK2YJL006C YGL014C-AP0C5N1 53 aa1.14□□□□□ -2.23
CTK2YJL006C NMT1P14743 455 aa1.14□□□□□ -2.23
CTK2YJL006C GAT4P40569 121 aa1.14□□□□□ -2.23
CTK2YJL006C APS2Q00381 147 aa1.14□□□□□ -2.23
CTK2YJL006C KTI11Q3E840 82 aa1.14□□□□□ -2.23
CTK2YJL006C BLM10P43583 2143 aa1.13□□□□□ -2.23
CTK2YJL006C RIF1P29539 1916 aa1.13□□□□□ -2.23
CTK2YJL006C YHR213WP0CI67 198 aa1.13□□□□□ -2.23
CTK2YJL006C MRPL11P36521 249 aaPredicted RBP1.13□□□□□ -2.23
CTK2YJL006C YIL102CP40488 101 aa1.13□□□□□ -2.23
CTK2YJL006C ERV14P53173 138 aa1.13□□□□□ -2.23
CTK2YJL006C AIM36Q03798 255 aa1.13□□□□□ -2.23
CTK2YJL006C SPC24Q04477 213 aa1.13□□□□□ -2.23
CTK2YJL006C IRC21Q04772 201 aa1.13□□□□□ -2.23
CTK2YJL006C BPH1P25356 2167 aa1.13□□□□□ -2.23
CTK2YJL006C UTP11P34247 250 aaPredicted RBP1.12□□□□□ -2.23
CTK2YJL006C LST8P41318 303 aa1.12□□□□□ -2.23
CTK2YJL006C YMR122CQ03879 124 aa1.12□□□□□ -2.23
CTK2YJL006C CCW12Q12127 133 aa1.12□□□□□ -2.23
CTK2YJL006C YIR021W-AQ3E739 70 aa1.12□□□□□ -2.23
CTK2YJL006C UBR1P19812 1950 aa1.11□□□□□ -2.23
CTK2YJL006C PFY1P07274 126 aa1.11□□□□□ -2.23
CTK2YJL006C SEC59P20048 519 aa1.11□□□□□ -2.23
CTK2YJL006C YKL044WP36092 106 aa1.11□□□□□ -2.23
CTK2YJL006C RPB11P38902 120 aa1.11□□□□□ -2.23
CTK2YJL006C YLR296WQ05898 108 aa1.11□□□□□ -2.23
CTK2YJL006C YOR072WQ08486 104 aa1.11□□□□□ -2.23
CTK2YJL006C GTT2Q12390 233 aa1.11□□□□□ -2.23
CTK2YJL006C HAP2P06774 265 aa1.1□□□□□ -2.23
CTK2YJL006C YJL009WP47078 108 aa1.1□□□□□ -2.23
CTK2YJL006C YNL122CP53921 115 aaPredicted RBP1.1□□□□□ -2.23
CTK2YJL006C LDB18Q07887 179 aa1.1□□□□□ -2.23
CTK2YJL006C FCF2Q12035 217 aaPredicted RBP1.1□□□□□ -2.23
CTK2YJL006C YOR376W-AQ3E805 51 aa1.1□□□□□ -2.23
CTK2YJL006C RPL36BO14455 100 aaKnown RBP1.09□□□□□ -2.23
CTK2YJL006C RPL36AP05745 100 aaPredicted RBP1.09□□□□□ -2.23
CTK2YJL006C UGX2P32772 223 aa1.09□□□□□ -2.23
CTK2YJL006C GSP1P32835 219 aaKnown RBP1.09□□□□□ -2.23
CTK2YJL006C GPI19Q04082 140 aa1.09□□□□□ -2.23
CTK2YJL006C PRM3Q08931 133 aa1.09□□□□□ -2.23
CTK2YJL006C RTC6O14464 93 aa1.08□□□□□ -2.24
CTK2YJL006C YOL013W-AP0C272 63 aaPredicted RBP1.08□□□□□ -2.24
CTK2YJL006C YCR001WP25347 104 aa1.08□□□□□ -2.24
CTK2YJL006C AIM18P38884 321 aa1.08□□□□□ -2.24
CTK2YJL006C SNF11P38956 169 aa1.08□□□□□ -2.24
CTK2YJL006C TDA2P40045 126 aa1.08□□□□□ -2.24
CTK2YJL006C COA4Q05809 96 aa1.08□□□□□ -2.24
CTK2YJL006C MED11Q99278 115 aa1.08□□□□□ -2.24
CTK2YJL006C YOR304C-AO14468 76 aa1.07□□□□□ -2.24
CTK2YJL006C RPS22AP0C0W1 130 aaKnown RBP1.07□□□□□ -2.24
CTK2YJL006C ARL3Q02804 198 aa1.07□□□□□ -2.24
CTK2YJL006C HPA2Q06592 156 aa1.07□□□□□ -2.24
CTK2YJL006C RPS22BQ3E7Y3 130 aaKnown RBP1.07□□□□□ -2.24
CTK2YJL006C ADK1P07170 222 aaKnown RBP1.06□□□□□ -2.24
CTK2YJL006C YCR099CP25657 155 aa1.06□□□□□ -2.24
CTK2YJL006C AIM4P38305 123 aaPredicted RBP1.06□□□□□ -2.24
CTK2YJL006C YAR029WP39549 74 aa1.06□□□□□ -2.24
CTK2YJL006C MGR2Q02889 113 aa1.06□□□□□ -2.24
CTK2YJL006C YLR042CQ07990 161 aa1.06□□□□□ -2.24
CTK2YJL006C RTR2Q12378 196 aa1.06□□□□□ -2.24
CTK2YJL006C YSF3P0C074 85 aaPredicted RBP1.05□□□□□ -2.24
CTK2YJL006C SRX1P36077 127 aa1.05□□□□□ -2.24
CTK2YJL006C YFR035CP43608 114 aa1.05□□□□□ -2.24
CTK2YJL006C COA6Q3E846 104 aa1.05□□□□□ -2.24
CTK2YJL006C YJL197C-AP0C5P0 93 aa1.04□□□□□ -2.24
CTK2YJL006C PAM16P42949 149 aa1.04□□□□□ -2.24
CTK2YJL006C RUB1Q03919 77 aa1.04□□□□□ -2.24
CTK2YJL006C EMP24P32803 203 aaKnown RBP1.03□□□□□ -2.24
CTK2YJL006C YIL014C-AQ02598 104 aa1.03□□□□□ -2.24
CTK2YJL006C YLR194CQ05777 254 aa1.03□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 67.2 ms