RNA–Protein interactions for RNA: YBR103W

SIF2, Transcript of WD40 repeat-containing subunit of Set3C histone deacetylase complex, yeastyeast

Gene SIF2, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIF2YBR103W RNH203Q12338 110 aa3.96□□□□□ -1.78
SIF2YBR103W Q0297Q9ZZV8 51 aa3.96□□□□□ -1.78
SIF2YBR103W RPS2P25443 254 aaKnown RBP3.95□□□□□ -1.78
SIF2YBR103W SMP1P38128 452 aa3.95□□□□□ -1.78
SIF2YBR103W PAU7P39545 55 aa3.95□□□□□ -1.78
SIF2YBR103W YPI1P43587 155 aa3.95□□□□□ -1.78
SIF2YBR103W FIP1P45976 327 aa3.95□□□□□ -1.78
SIF2YBR103W MST27P53176 234 aa3.95□□□□□ -1.78
SIF2YBR103W HSK3P69852 69 aa3.95□□□□□ -1.78
SIF2YBR103W ATP19P81451 68 aa3.95□□□□□ -1.78
SIF2YBR103W MSA1Q08471 629 aa3.95□□□□□ -1.78
SIF2YBR103W KSH1Q8TGJ3 72 aa3.95□□□□□ -1.78
SIF2YBR103W RPS23AP0CX29 145 aaKnown RBP3.95□□□□□ -1.78
SIF2YBR103W RPS23BP0CX30 145 aa3.95□□□□□ -1.78
SIF2YBR103W MRS3P10566 314 aa3.95□□□□□ -1.78
SIF2YBR103W TOM40P23644 387 aaKnown RBP3.95□□□□□ -1.78
SIF2YBR103W HOT13P36078 116 aa3.95□□□□□ -1.78
SIF2YBR103W PEX22P39718 180 aa3.95□□□□□ -1.78
SIF2YBR103W RRT13P40042 185 aa3.95□□□□□ -1.78
SIF2YBR103W YGR219WP53307 113 aa3.95□□□□□ -1.78
SIF2YBR103W ATP23P53722 227 aa3.95□□□□□ -1.78
SIF2YBR103W GAT3Q07928 141 aa3.95□□□□□ -1.78
SIF2YBR103W TIM18Q08749 192 aa3.95□□□□□ -1.78
SIF2YBR103W YLR365WQ7LIF2 110 aa3.95□□□□□ -1.78
SIF2YBR103W YMR316C-AI2HB70 103 aa3.94□□□□□ -1.78
SIF2YBR103W BET1P22804 142 aa3.94□□□□□ -1.78
SIF2YBR103W IMP1P28627 190 aa3.94□□□□□ -1.78
SIF2YBR103W YAR029WP39549 74 aa3.94□□□□□ -1.78
SIF2YBR103W VPS55P47111 140 aa3.94□□□□□ -1.78
SIF2YBR103W SED1Q01589 338 aa3.94□□□□□ -1.78
SIF2YBR103W SHH4Q06236 168 aa3.94□□□□□ -1.78
SIF2YBR103W RRS1Q08746 203 aaKnown RBP3.94□□□□□ -1.78
SIF2YBR103W RPL28P02406 149 aaKnown RBP3.93□□□□□ -1.78
SIF2YBR103W YRA2P36036 203 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
SIF2YBR103W CSH1P38287 376 aa3.93□□□□□ -1.78
SIF2YBR103W YNL217WP40152 326 aa3.93□□□□□ -1.78
SIF2YBR103W YIL029CP40538 142 aa3.93□□□□□ -1.78
SIF2YBR103W LST8P41318 303 aa3.93□□□□□ -1.78
SIF2YBR103W UBC13P52490 153 aa3.93□□□□□ -1.78
SIF2YBR103W YNL046WP53956 172 aa3.93□□□□□ -1.78
SIF2YBR103W TMC1Q08422 150 aaPredicted RBP3.93□□□□□ -1.78
SIF2YBR103W Q0255P03881 472 aa3.92□□□□□ -1.78
SIF2YBR103W PIS1P06197 220 aaKnown RBP3.92□□□□□ -1.78
SIF2YBR103W YCR041WP37265 110 aa3.92□□□□□ -1.78
SIF2YBR103W SFT2P38166 215 aa3.92□□□□□ -1.78
SIF2YBR103W DSE2P38844 325 aa3.92□□□□□ -1.78
SIF2YBR103W OST1P41543 476 aaKnown RBP3.92□□□□□ -1.78
SIF2YBR103W EMC6Q12431 108 aa3.92□□□□□ -1.78
SIF2YBR103W HUG1Q6Q5K6 68 aa3.92□□□□□ -1.78
SIF2YBR103W YHR173CP38864 112 aa3.92□□□□□ -1.78
SIF2YBR103W YGR050CP53231 118 aa3.92□□□□□ -1.78
SIF2YBR103W YLR281CQ05863 155 aa3.92□□□□□ -1.78
SIF2YBR103W YDR381C-AQ3E6R5 114 aa3.92□□□□□ -1.78
SIF2YBR103W YPR108W-AQ3E7B3 70 aa3.92□□□□□ -1.78
SIF2YBR103W HSP12P22943 109 aaKnown RBP3.91□□□□□ -1.78
SIF2YBR103W IES6P32617 166 aa3.91□□□□□ -1.78
SIF2YBR103W RSM19P53733 91 aaPredicted RBP3.91□□□□□ -1.78
SIF2YBR103W YLR112WQ12130 139 aa3.91□□□□□ -1.78
SIF2YBR103W RPL18AP0CX49 186 aaKnown RBP3.9□□□□□ -1.79
SIF2YBR103W RPL18BP0CX50 186 aaKnown RBP3.9□□□□□ -1.79
SIF2YBR103W MRPL31P14063 131 aaPredicted RBP3.9□□□□□ -1.79
SIF2YBR103W RPL30P14120 105 aaKnown RBP3.9□□□□□ -1.79
SIF2YBR103W FPR2P32472 135 aa3.9□□□□□ -1.79
SIF2YBR103W YIR020CP40575 100 aa3.9□□□□□ -1.79
SIF2YBR103W NCA3P46955 337 aa3.9□□□□□ -1.79
SIF2YBR103W HAL1Q01766 294 aa3.9□□□□□ -1.79
SIF2YBR103W YPL261CQ08976 102 aa3.9□□□□□ -1.79
SIF2YBR103W UBC4P15731 148 aa3.89□□□□□ -1.79
SIF2YBR103W YSY6P38374 65 aa3.89□□□□□ -1.79
SIF2YBR103W RPL15AP05748 204 aaKnown RBP3.88□□□□□ -1.79
SIF2YBR103W ROX3P25046 220 aa3.88□□□□□ -1.79
SIF2YBR103W SIM1P40472 476 aa3.88□□□□□ -1.79
SIF2YBR103W RPL15BP54780 204 aaPredicted RBP3.88□□□□□ -1.79
SIF2YBR103W YMR175W-AQ3E766 64 aa3.88□□□□□ -1.79
SIF2YBR103W IGO2Q9P305 131 aa3.88□□□□□ -1.79
SIF2YBR103W RPL42AP0CX27 106 aaKnown RBP3.88□□□□□ -1.79
SIF2YBR103W RPL42BP0CX28 106 aaKnown RBP3.88□□□□□ -1.79
SIF2YBR103W RPL16BP26785 198 aaKnown RBP3.88□□□□□ -1.79
SIF2YBR103W YER187WP40102 141 aa3.88□□□□□ -1.79
SIF2YBR103W YIA6P40556 373 aa3.88□□□□□ -1.79
SIF2YBR103W YDL009CQ12210 107 aa3.88□□□□□ -1.79
SIF2YBR103W YMR317WQ04893 1140 aa3.87□□□□□ -1.79
SIF2YBR103W PBA1Q05778 276 aa3.87□□□□□ -1.79
SIF2YBR103W RPL39P04650 51 aa3.86□□□□□ -1.79
SIF2YBR103W RPS8AP0CX39 200 aaKnown RBP3.85□□□□□ -1.79
SIF2YBR103W RPS8BP0CX40 200 aaKnown RBP3.85□□□□□ -1.79
SIF2YBR103W AIM19P40502 157 aa3.85□□□□□ -1.79
SIF2YBR103W YMR254CQ04838 102 aa3.85□□□□□ -1.79
SIF2YBR103W YCL048W-AQ2V2Q2 79 aa3.85□□□□□ -1.79
SIF2YBR103W PFY1P07274 126 aa3.84□□□□□ -1.79
SIF2YBR103W RPB9P27999 122 aa3.84□□□□□ -1.79
SIF2YBR103W SPT4P32914 102 aaPredicted RBP3.84□□□□□ -1.79
SIF2YBR103W SWD3P38123 315 aa3.84□□□□□ -1.79
SIF2YBR103W CTR2P38865 189 aa3.84□□□□□ -1.79
SIF2YBR103W YNR077CP53758 84 aa3.84□□□□□ -1.79
SIF2YBR103W IRC23Q08416 157 aa3.84□□□□□ -1.79
SIF2YBR103W YMR295CQ03559 197 aa3.84□□□□□ -1.8
SIF2YBR103W CRC1Q12289 327 aa3.84□□□□□ -1.8
SIF2YBR103W YEL067CP39978 195 aa3.83□□□□□ -1.8
SIF2YBR103W PEX17P40155 199 aa3.83□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 45.7 ms