RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 IFNEQ86WN2 208 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 ZNF614Q8N883 585 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 SYTL5Q8TDW5 730 aaPredicted RBP11.35□□□□□ -0.59
LINC00654-201ENST00000379053 NCKAP1Q9Y2A7 1128 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 CNTNAP2Q9UHC6 1331 aa11.35□□□□□ -0.59
LINC00654-201ENST00000379053 MLNP12872 115 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 ITIH2P19823 946 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 GGCXP38435 758 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 RGL4Q8IZJ4 473 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 NDEL1Q9GZM8 345 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 CLTCL1P53675 1640 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 SSU72P8A0A1W2PR75 194 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 WNT10BO00744 389 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 VPS26AO75436 327 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 FARP2O94887 1054 aaPredicted RBP11.34□□□□□ -0.59
LINC00654-201ENST00000379053 MAGEA9P43362 315 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 FBXO47Q5MNV8 452 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 C4orf22Q6V702 233 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 CBWD2Q8IUF1 395 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 ATP8B4Q8TF62 1192 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 WDR41Q9HAD4 459 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 SNTG2Q9NY99 539 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 HPGDP15428 266 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 LAMTOR4Q0VGL1 99 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 FSTL1Q12841 308 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 NAB2Q15742 525 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 EFL1Q7Z2Z2 1120 aaKnown RBP11.34□□□□□ -0.59
LINC00654-201ENST00000379053 CACUL1Q86Y37 369 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 DDX43Q9NXZ2 648 aaKnown RBP11.34□□□□□ -0.59
LINC00654-201ENST00000379053 PDZK1P1A8MUH7 402 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 TGFB3P10600 412 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 GPC1P35052 558 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 PPATQ06203 517 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 UNC45BQ8IWX7 931 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 TRIM51Q9BSJ1 452 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 KIAA1683Q9H0B3 1180 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 F8W810 466 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 IFRD1O00458 451 aaPredicted RBP11.34□□□□□ -0.59
LINC00654-201ENST00000379053 PRMT3O60678 531 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 GUCA1AP43080 201 aaPredicted RBP11.34□□□□□ -0.59
LINC00654-201ENST00000379053 CARSP49589 748 aaKnown RBP11.34□□□□□ -0.59
LINC00654-201ENST00000379053 NDUFV1P49821 464 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 BTKQ06187 659 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 PTK7Q13308 1070 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 MKRN4PQ13434 485 aaPredicted RBP11.34□□□□□ -0.59
LINC00654-201ENST00000379053 ACVR2BQ13705 512 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 SLFN11Q7Z7L1 901 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 TMA16Q96EY4 203 aaKnown RBP11.34□□□□□ -0.59
LINC00654-201ENST00000379053 RTFDC1Q9BY42 306 aaPredicted RBP11.34□□□□□ -0.59
LINC00654-201ENST00000379053 CLPBQ9H078 707 aa11.34□□□□□ -0.59
LINC00654-201ENST00000379053 EVPLLA8MZ36 301 aa11.33□□□□□ -0.59
LINC00654-201ENST00000379053 CDH2P19022 906 aaPredicted RBP11.33□□□□□ -0.59
LINC00654-201ENST00000379053 SOX11P35716 441 aa11.33□□□□□ -0.59
LINC00654-201ENST00000379053 SREBF1P36956 1147 aa11.33□□□□□ -0.59
LINC00654-201ENST00000379053 RAP1GAPP47736 663 aa11.33□□□□□ -0.59
LINC00654-201ENST00000379053 PSEN2P49810 448 aa11.33□□□□□ -0.59
LINC00654-201ENST00000379053 RETSATQ6NUM9 610 aa11.33□□□□□ -0.59
LINC00654-201ENST00000379053 PRUNE1Q86TP1 453 aa11.33□□□□□ -0.59
LINC00654-201ENST00000379053 PGLYRP2Q96PD5 576 aa11.33□□□□□ -0.59
LINC00654-201ENST00000379053 TSC22D3Q99576 134 aa11.33□□□□□ -0.59
LINC00654-201ENST00000379053 SYT15Q9BQS2 421 aa11.33□□□□□ -0.59
LINC00654-201ENST00000379053 SLC24A3Q9HC58 644 aa11.33□□□□□ -0.59
LINC00654-201ENST00000379053 PSMC3IPQ9P2W1 217 aaPredicted RBP11.33□□□□□ -0.59
LINC00654-201ENST00000379053 DYRK1BQ9Y463 629 aa11.33□□□□□ -0.59
LINC00654-201ENST00000379053 PTPRUQ92729 1446 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 SPAG6O75602 509 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 PLA2G4AP47712 749 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 AP2B1P63010 937 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 ERVK-9P63128 1117 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 ERVK-24P63145 666 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 CCDC144BQ3MJ40 725 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 FBXO38Q6PIJ6 1188 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 FAM162AQ96A26 154 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 MRPL1Q9BYD6 325 aaKnown RBP11.33□□□□□ -0.6
LINC00654-201ENST00000379053 AAR2Q9Y312 384 aaKnown RBP11.33□□□□□ -0.6
LINC00654-201ENST00000379053 KRT16P08779 473 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 IMPDH2P12268 514 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 FGFR2P21802 821 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 GRIN1Q05586 938 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 CENPPQ6IPU0 288 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 MMGT1Q8N4V1 131 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 SPATA4Q8NEY3 305 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 STAMBPL1Q96FJ0 436 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 C17orf80Q9BSJ5 609 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 APPL1Q9UKG1 709 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 APOA4P06727 396 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 TMEM253P0C7T8 217 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 PNMA6AP0CW24 399 aaPredicted RBP11.33□□□□□ -0.6
LINC00654-201ENST00000379053 TKTL1P51854 596 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 CNTN1Q12860 1018 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 KLHDC7AQ5VTJ3 777 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 GJB7Q6PEY0 223 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 SGF29Q96ES7 293 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 SYT17Q9BSW7 474 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 MARCOQ9UEW3 520 aaPredicted RBP11.33□□□□□ -0.6
LINC00654-201ENST00000379053 CHORDC1Q9UHD1 332 aaPredicted RBP11.33□□□□□ -0.6
LINC00654-201ENST00000379053 DBR1Q9UK59 544 aaKnown RBP11.33□□□□□ -0.6
LINC00654-201ENST00000379053 MRFAP1Q9Y605 127 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 LAMC1P11047 1609 aa11.33□□□□□ -0.6
LINC00654-201ENST00000379053 RNF17Q9BXT8 1623 aaKnown RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms