RNA–Protein interactions for RNA: ENSMUST00000075141.6

Trim17-202, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim17, Length 3,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-202ENSMUST00000075141 Ap2b1Q9DBG3 937 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Hes6Q9JHE6 224 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Olig1Q9JKN5 260 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Scn9aQ62205 1984 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Rap1gapA2ALS5 663 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Ssxb9A2BI93 185 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Pus7B7ZNL8 666 aaKnown RBP9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Kpna7C0LLJ0 499 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Impa1O55023 277 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Shoc2O88520 582 aaKnown RBP9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Rab6bP61294 208 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Mfsd14aP70187 490 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 NfiaQ02780 532 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Mex3cQ05A36 652 aaKnown RBP9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Dact3Q0PHV7 610 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Pi4k2aQ2TBE6 479 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Prmt9Q3U3W5 846 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Itih3Q61704 889 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Ugt1a1Q63886 535 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Ddx31Q6NZQ2 687 aaKnown RBP9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Tdpoz2Q717B2 364 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Cnksr2Q80YA9 1032 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Nipal4Q8BZF2 406 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 TdrpQ8C5P7 182 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Gpc5Q8CAL5 572 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Pglyrp2Q8VCS0 530 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 HlcsQ920N2 722 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Rnf112Q96DY5 654 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Chst12Q99LL3 419 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 SncaipQ99ME3 962 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Mrpl11Q9CQF0 192 aaKnown RBP9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Cul2Q9D4H8 745 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 MajinQ9D992 256 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Itgb1bp2Q9R000 350 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Ror1Q9Z139 937 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Pck1Q9Z2V4 622 aa9.65□□□□□ -0.86
Trim17-202ENSMUST00000075141 Cacna1fQ9JIS7 1985 aa9.65□□□□□ -0.87
Trim17-202ENSMUST00000075141 Gm29554A0A087WNW4 188 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Rabgap1lA6H6A9 815 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Lrrc73B2RWC4 316 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Smok3aC0HKC8 504 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Smok3bC0HKC9 504 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Lilra5D3Z7A9 295 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Maml3D4QGC2 1135 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Zfp94E9Q6Y4 486 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 InhbeO08717 350 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Glud1P26443 558 aaKnown RBP9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Rpl10aP53026 217 aaKnown RBP9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Il1rapl1P59823 695 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Tfdp1Q08639 410 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Srd5a1Q68FF9 255 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Dusp16Q6PCP3 660 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Znf513Q6PD29 541 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Gramd1bQ80TI0 738 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Ipo5Q8BKC5 1097 aaKnown RBP9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Usp37Q8C0R0 979 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Cys1Q8R4T1 145 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Gstm4Q8R5I6 218 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 FtcdQ91XD4 541 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Wars2Q9CYK1 360 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Arl10Q9QXJ4 243 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 SmapQ9R0P4 181 aaKnown RBP9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 2210011C24RikA0A087WQ89 206 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Ms4a14A0A087WSD2 1232 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Rps6P62754 249 aaKnown RBP9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Atp6v1b2P62814 511 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Fam172aQ3TNH5 417 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Alkbh5Q3TSG4 395 aaKnown RBP9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Atxn7l3bQ3UD01 97 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Spag6Q3V0U9 509 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Pdp2Q504M2 532 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Best3Q6H1V1 669 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Ush1gQ80T11 461 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Vmn2r43Q80Z08 845 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Tmem39bQ810L4 492 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Col23a1Q8K4G2 532 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Tm9sf1Q9DBU0 606 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 IcmtQ9EQK7 283 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 LipaQ9Z0M5 397 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Cyp2ab1S4R196 498 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Mtcl1Q3UHU5 1945 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Dnase1l3O55070 310 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Ptp4a2O70274 167 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 CnpP16330 420 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 PkmP52480 531 aaKnown RBP9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Map3k9Q3U1V8 1077 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 D630036H23RikQ3UQD6 204 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Capn13Q3UW68 665 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 E330034G19RikQ3UWX6 351 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Myl6Q60605 151 aaKnown RBP9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Pcsk7Q61139 770 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Cyp2c29Q64458 490 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Otud6aQ6IE21 290 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Zfp341Q6PGC9 846 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Supt20hQ7TT00 530 aaKnown RBP9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Gpr139Q80UC8 345 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Catsper3Q80W99 395 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Pcmtd2Q8BHD8 359 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Ccdc68Q8BVC4 333 aa9.64□□□□□ -0.87
Trim17-202ENSMUST00000075141 Lin52Q8CD94 116 aa9.64□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 16.8 ms