Protein–RNA interactions for Protein: Q80TI0

Gramd1b, GRAM domain-containing protein 1B, mousemouse

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gramd1bQ80TI0 Gm25239-201ENSMUST00000174915 86 ntBASIC33,98■■■■□ 3,03
Gramd1bQ80TI0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33,1■■■□□ 2,89
Gramd1bQ80TI0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31,85■■■□□ 2,69
Gramd1bQ80TI0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31,69■■■□□ 2,66
Gramd1bQ80TI0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31,47■■■□□ 2,63
Gramd1bQ80TI0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31,24■■■□□ 2,59
Gramd1bQ80TI0 Psd-208ENSMUST00000224556 2034 ntBASIC31,19■■■□□ 2,58
Gramd1bQ80TI0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30,94■■■□□ 2,54
Gramd1bQ80TI0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30,85■■■□□ 2,53
Gramd1bQ80TI0 Gm15042-201ENSMUST00000120212 883 ntBASIC30,08■■■□□ 2,41
Gramd1bQ80TI0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30,02■■■□□ 2,4
Gramd1bQ80TI0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29,94■■■□□ 2,38
Gramd1bQ80TI0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29,69■■■□□ 2,34
Gramd1bQ80TI0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29,61■■■□□ 2,33
Gramd1bQ80TI0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29,57■■■□□ 2,32
Gramd1bQ80TI0 Gm15045-201ENSMUST00000117359 883 ntBASIC29,49■■■□□ 2,31
Gramd1bQ80TI0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29,48■■■□□ 2,31
Gramd1bQ80TI0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29,39■■■□□ 2,3
Gramd1bQ80TI0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29,34■■■□□ 2,29
Gramd1bQ80TI0 Gm24109-201ENSMUST00000175489 103 ntBASIC29,27■■■□□ 2,28
Gramd1bQ80TI0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29,24■■■□□ 2,27
Gramd1bQ80TI0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29,16■■■□□ 2,26
Gramd1bQ80TI0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29,02■■■□□ 2,24
Gramd1bQ80TI0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29,01■■■□□ 2,24
Gramd1bQ80TI0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28,76■■■□□ 2,19
Gramd1bQ80TI0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28,64■■■□□ 2,18
Gramd1bQ80TI0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28,62■■■□□ 2,17
Gramd1bQ80TI0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28,6■■■□□ 2,17
Gramd1bQ80TI0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28,5■■■□□ 2,15
Gramd1bQ80TI0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28,44■■■□□ 2,14
Gramd1bQ80TI0 Gm23366-201ENSMUST00000175022 89 ntBASIC28,42■■■□□ 2,14
Gramd1bQ80TI0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28,4■■■□□ 2,14
Gramd1bQ80TI0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28,4■■■□□ 2,14
Gramd1bQ80TI0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28,36■■■□□ 2,13
Gramd1bQ80TI0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28,27■■■□□ 2,12
Gramd1bQ80TI0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28,26■■■□□ 2,11
Gramd1bQ80TI0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28,26■■■□□ 2,11
Gramd1bQ80TI0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28,22■■■□□ 2,11
Gramd1bQ80TI0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28,21■■■□□ 2,11
Gramd1bQ80TI0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28,19■■■□□ 2,1
Gramd1bQ80TI0 Gm42596-201ENSMUST00000196305 1958 ntBASIC28,18■■■□□ 2,1
Gramd1bQ80TI0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28,15■■■□□ 2,1
Gramd1bQ80TI0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28,14■■■□□ 2,09
Gramd1bQ80TI0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28,08■■■□□ 2,09
Gramd1bQ80TI0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28,01■■■□□ 2,07
Gramd1bQ80TI0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28,01■■■□□ 2,07
Gramd1bQ80TI0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2,07
Gramd1bQ80TI0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27,97■■■□□ 2,07
Gramd1bQ80TI0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27,9■■■□□ 2,06
Gramd1bQ80TI0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27,88■■■□□ 2,05
Gramd1bQ80TI0 Gm10524-201ENSMUST00000181931 1893 ntBASIC27,83■■■□□ 2,05
Gramd1bQ80TI0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27,81■■■□□ 2,04
Gramd1bQ80TI0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27,8■■■□□ 2,04
Gramd1bQ80TI0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27,77■■■□□ 2,04
Gramd1bQ80TI0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27,69■■■□□ 2,02
Gramd1bQ80TI0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27,67■■■□□ 2,02
Gramd1bQ80TI0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27,66■■■□□ 2,02
Gramd1bQ80TI0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27,64■■■□□ 2,01
Gramd1bQ80TI0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27,62■■■□□ 2,01
Gramd1bQ80TI0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27,51■■□□□ 1,99
Gramd1bQ80TI0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27,34■■□□□ 1,97
Gramd1bQ80TI0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27,33■■□□□ 1,97
Gramd1bQ80TI0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27,29■■□□□ 1,96
Gramd1bQ80TI0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27,2■■□□□ 1,94
Gramd1bQ80TI0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27,17■■□□□ 1,94
Gramd1bQ80TI0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27,15■■□□□ 1,94
Gramd1bQ80TI0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27,1■■□□□ 1,93
Gramd1bQ80TI0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27,09■■□□□ 1,93
Gramd1bQ80TI0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27,07■■□□□ 1,92
Gramd1bQ80TI0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27,02■■□□□ 1,92
Gramd1bQ80TI0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27,02■■□□□ 1,92
Gramd1bQ80TI0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26,99■■□□□ 1,91
Gramd1bQ80TI0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26,98■■□□□ 1,91
Gramd1bQ80TI0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26,95■■□□□ 1,91
Gramd1bQ80TI0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26,95■■□□□ 1,91
Gramd1bQ80TI0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26,94■■□□□ 1,9
Gramd1bQ80TI0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26,91■■□□□ 1,9
Gramd1bQ80TI0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC26,85■■□□□ 1,89
Gramd1bQ80TI0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26,83■■□□□ 1,89
Gramd1bQ80TI0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26,82■■□□□ 1,88
Gramd1bQ80TI0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26,82■■□□□ 1,88
Gramd1bQ80TI0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26,79■■□□□ 1,88
Gramd1bQ80TI0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC26,78■■□□□ 1,88
Gramd1bQ80TI0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26,77■■□□□ 1,88
Gramd1bQ80TI0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26,77■■□□□ 1,88
Gramd1bQ80TI0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26,76■■□□□ 1,87
Gramd1bQ80TI0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26,76■■□□□ 1,87
Gramd1bQ80TI0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26,74■■□□□ 1,87
Gramd1bQ80TI0 Gm25238-201ENSMUST00000174914 89 ntBASIC26,7■■□□□ 1,86
Gramd1bQ80TI0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26,69■■□□□ 1,86
Gramd1bQ80TI0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26,66■■□□□ 1,86
Gramd1bQ80TI0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26,62■■□□□ 1,85
Gramd1bQ80TI0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26,59■■□□□ 1,85
Gramd1bQ80TI0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,85
Gramd1bQ80TI0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26,58■■□□□ 1,85
Gramd1bQ80TI0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26,57■■□□□ 1,84
Gramd1bQ80TI0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26,54■■□□□ 1,84
Gramd1bQ80TI0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26,53■■□□□ 1,84
Gramd1bQ80TI0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,83
Gramd1bQ80TI0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26,46■■□□□ 1,83
Retrieved 100 of 76,532 protein–RNA pairs in 21,5 ms