Protein–RNA interactions for Protein: Q8VCS0

Pglyrp2, N-acetylmuramoyl-L-alanine amidase, mousemouse

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pglyrp2Q8VCS0 Gm25239-201ENSMUST00000174915 86 ntBASIC35,55■■■■□ 3,28
Pglyrp2Q8VCS0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34,67■■■■□ 3,14
Pglyrp2Q8VCS0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33,53■■■□□ 2,96
Pglyrp2Q8VCS0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33,42■■■□□ 2,94
Pglyrp2Q8VCS0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32,52■■■□□ 2,8
Pglyrp2Q8VCS0 Psd-208ENSMUST00000224556 2034 ntBASIC32,34■■■□□ 2,77
Pglyrp2Q8VCS0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32,14■■■□□ 2,74
Pglyrp2Q8VCS0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2,71
Pglyrp2Q8VCS0 Gm15042-201ENSMUST00000120212 883 ntBASIC31,79■■■□□ 2,68
Pglyrp2Q8VCS0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31,56■■■□□ 2,64
Pglyrp2Q8VCS0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31,54■■■□□ 2,64
Pglyrp2Q8VCS0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31,24■■■□□ 2,59
Pglyrp2Q8VCS0 Gm15045-201ENSMUST00000117359 883 ntBASIC31,22■■■□□ 2,59
Pglyrp2Q8VCS0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31,19■■■□□ 2,58
Pglyrp2Q8VCS0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31,15■■■□□ 2,58
Pglyrp2Q8VCS0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2,55
Pglyrp2Q8VCS0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30,97■■■□□ 2,55
Pglyrp2Q8VCS0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30,93■■■□□ 2,54
Pglyrp2Q8VCS0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30,66■■■□□ 2,5
Pglyrp2Q8VCS0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30,54■■■□□ 2,48
Pglyrp2Q8VCS0 Gm24109-201ENSMUST00000175489 103 ntBASIC30,47■■■□□ 2,47
Pglyrp2Q8VCS0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30,43■■■□□ 2,46
Pglyrp2Q8VCS0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30,41■■■□□ 2,46
Pglyrp2Q8VCS0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30,35■■■□□ 2,45
Pglyrp2Q8VCS0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30,32■■■□□ 2,44
Pglyrp2Q8VCS0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30,3■■■□□ 2,44
Pglyrp2Q8VCS0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30,25■■■□□ 2,43
Pglyrp2Q8VCS0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30,22■■■□□ 2,43
Pglyrp2Q8VCS0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30,21■■■□□ 2,43
Pglyrp2Q8VCS0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30,03■■■□□ 2,4
Pglyrp2Q8VCS0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30■■■□□ 2,39
Pglyrp2Q8VCS0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2,39
Pglyrp2Q8VCS0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29,93■■■□□ 2,38
Pglyrp2Q8VCS0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29,92■■■□□ 2,38
Pglyrp2Q8VCS0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29,92■■■□□ 2,38
Pglyrp2Q8VCS0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29,8■■■□□ 2,36
Pglyrp2Q8VCS0 Gm23366-201ENSMUST00000175022 89 ntBASIC29,77■■■□□ 2,36
Pglyrp2Q8VCS0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29,75■■■□□ 2,35
Pglyrp2Q8VCS0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29,61■■■□□ 2,33
Pglyrp2Q8VCS0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29,59■■■□□ 2,33
Pglyrp2Q8VCS0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29,58■■■□□ 2,33
Pglyrp2Q8VCS0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29,55■■■□□ 2,32
Pglyrp2Q8VCS0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29,52■■■□□ 2,32
Pglyrp2Q8VCS0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29,43■■■□□ 2,3
Pglyrp2Q8VCS0 Gm10524-201ENSMUST00000181931 1893 ntBASIC29,42■■■□□ 2,3
Pglyrp2Q8VCS0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29,37■■■□□ 2,29
Pglyrp2Q8VCS0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29,37■■■□□ 2,29
Pglyrp2Q8VCS0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29,28■■■□□ 2,28
Pglyrp2Q8VCS0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29,22■■■□□ 2,27
Pglyrp2Q8VCS0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29,16■■■□□ 2,26
Pglyrp2Q8VCS0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29,14■■■□□ 2,25
Pglyrp2Q8VCS0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29,05■■■□□ 2,24
Pglyrp2Q8VCS0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29,04■■■□□ 2,24
Pglyrp2Q8VCS0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28,8■■■□□ 2,2
Pglyrp2Q8VCS0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28,79■■■□□ 2,2
Pglyrp2Q8VCS0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28,72■■■□□ 2,19
Pglyrp2Q8VCS0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28,72■■■□□ 2,19
Pglyrp2Q8VCS0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28,7■■■□□ 2,18
Pglyrp2Q8VCS0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28,65■■■□□ 2,18
Pglyrp2Q8VCS0 Gm42596-201ENSMUST00000196305 1958 ntBASIC28,61■■■□□ 2,17
Pglyrp2Q8VCS0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28,58■■■□□ 2,17
Pglyrp2Q8VCS0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28,58■■■□□ 2,17
Pglyrp2Q8VCS0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28,55■■■□□ 2,16
Pglyrp2Q8VCS0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28,55■■■□□ 2,16
Pglyrp2Q8VCS0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28,51■■■□□ 2,15
Pglyrp2Q8VCS0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28,5■■■□□ 2,15
Pglyrp2Q8VCS0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28,48■■■□□ 2,15
Pglyrp2Q8VCS0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28,47■■■□□ 2,15
Pglyrp2Q8VCS0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28,46■■■□□ 2,15
Pglyrp2Q8VCS0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28,4■■■□□ 2,14
Pglyrp2Q8VCS0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28,35■■■□□ 2,13
Pglyrp2Q8VCS0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28,26■■■□□ 2,11
Pglyrp2Q8VCS0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28,26■■■□□ 2,11
Pglyrp2Q8VCS0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28,18■■■□□ 2,1
Pglyrp2Q8VCS0 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28,15■■■□□ 2,1
Pglyrp2Q8VCS0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28,13■■■□□ 2,09
Pglyrp2Q8VCS0 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28,11■■■□□ 2,09
Pglyrp2Q8VCS0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28,08■■■□□ 2,09
Pglyrp2Q8VCS0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28,04■■■□□ 2,08
Pglyrp2Q8VCS0 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28,02■■■□□ 2,08
Pglyrp2Q8VCS0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2,07
Pglyrp2Q8VCS0 Gm27325-201ENSMUST00000175467 74 ntBASIC27,99■■■□□ 2,07
Pglyrp2Q8VCS0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27,95■■■□□ 2,07
Pglyrp2Q8VCS0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27,94■■■□□ 2,06
Pglyrp2Q8VCS0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27,92■■■□□ 2,06
Pglyrp2Q8VCS0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27,9■■■□□ 2,06
Pglyrp2Q8VCS0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27,86■■■□□ 2,05
Pglyrp2Q8VCS0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27,84■■■□□ 2,05
Pglyrp2Q8VCS0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27,83■■■□□ 2,05
Pglyrp2Q8VCS0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27,83■■■□□ 2,05
Pglyrp2Q8VCS0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27,82■■■□□ 2,04
Pglyrp2Q8VCS0 Gm25238-201ENSMUST00000174914 89 ntBASIC27,82■■■□□ 2,04
Pglyrp2Q8VCS0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27,8■■■□□ 2,04
Pglyrp2Q8VCS0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27,79■■■□□ 2,04
Pglyrp2Q8VCS0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27,78■■■□□ 2,04
Pglyrp2Q8VCS0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27,78■■■□□ 2,04
Pglyrp2Q8VCS0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27,78■■■□□ 2,04
Pglyrp2Q8VCS0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27,73■■■□□ 2,03
Pglyrp2Q8VCS0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27,71■■■□□ 2,03
Pglyrp2Q8VCS0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27,67■■■□□ 2,02
Retrieved 100 of 76,532 protein–RNA pairs in 11,6 ms