RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C UBI4P0CG63 381 aaKnown RBP1.05□□□□□ -2.24
RRI1YDL216C ORM1P53224 222 aa1.05□□□□□ -2.24
RRI1YDL216C YDR476CQ03362 224 aa1.05□□□□□ -2.24
RRI1YDL216C NMA1Q06178 401 aaKnown RBP1.05□□□□□ -2.24
RRI1YDL216C CMC2Q3E7A4 109 aa1.05□□□□□ -2.24
RRI1YDL216C HYP2P23301 157 aaKnown RBP1.04□□□□□ -2.24
RRI1YDL216C HHY1P39982 102 aa1.04□□□□□ -2.24
RRI1YDL216C YER121WP40076 114 aa1.04□□□□□ -2.24
RRI1YDL216C DLS1P40366 167 aa1.04□□□□□ -2.24
RRI1YDL216C YOR072WQ08486 104 aa1.04□□□□□ -2.24
RRI1YDL216C HSP150P32478 413 aa1.03□□□□□ -2.24
RRI1YDL216C FMN1Q03778 218 aa1.03□□□□□ -2.24
RRI1YDL216C YGL041W-AP0C5N3 154 aa1.02□□□□□ -2.25
RRI1YDL216C ATG8P38182 117 aaRIP-Chip data1.02□□□□□ -2.25not detected
RRI1YDL216C YNL122CP53921 115 aaPredicted RBP1.02□□□□□ -2.25
RRI1YDL216C QCR2P07257 368 aa1.01□□□□□ -2.25
RRI1YDL216C RPL30P14120 105 aaKnown RBP1.01□□□□□ -2.25
RRI1YDL216C YIL086CP40503 102 aa1.01□□□□□ -2.25
RRI1YDL216C RCF2P53721 224 aa1.01□□□□□ -2.25
RRI1YDL216C TLG1Q03322 224 aa1.01□□□□□ -2.25
RRI1YDL216C YPD1Q07688 167 aa1.01□□□□□ -2.25
RRI1YDL216C MRS4P23500 304 aa1□□□□□ -2.25
RRI1YDL216C IPT1P38954 527 aa0.99□□□□□ -2.25
RRI1YDL216C APQ12P40532 138 aa0.99□□□□□ -2.25
RRI1YDL216C YGL193CP53097 103 aa0.99□□□□□ -2.25
RRI1YDL216C RPS22AP0C0W1 130 aaKnown RBP0.98□□□□□ -2.25
RRI1YDL216C RPS28BP0C0X0 67 aaKnown RBP0.98□□□□□ -2.25
RRI1YDL216C SRP21P32342 167 aa0.98□□□□□ -2.25
RRI1YDL216C FIP1P45976 327 aa0.98□□□□□ -2.25
RRI1YDL216C MGR2Q02889 113 aa0.98□□□□□ -2.25
RRI1YDL216C RPS28AQ3E7X9 67 aaPredicted RBP0.98□□□□□ -2.25
RRI1YDL216C RPS22BQ3E7Y3 130 aaKnown RBP0.98□□□□□ -2.25
RRI1YDL216C ATP19P81451 68 aa0.97□□□□□ -2.25
RRI1YDL216C IRC19Q07843 230 aa0.97□□□□□ -2.25
RRI1YDL216C RFU1Q08003 200 aa0.97□□□□□ -2.25
RRI1YDL216C PRM3Q08931 133 aa0.97□□□□□ -2.25
RRI1YDL216C RIB3Q99258 208 aa0.97□□□□□ -2.25
RRI1YDL216C YJL197C-AP0C5P0 93 aa0.96□□□□□ -2.26
RRI1YDL216C CYC2P38909 366 aa0.96□□□□□ -2.26
RRI1YDL216C PBI2P0CT04 75 aaKnown RBP0.95□□□□□ -2.26
RRI1YDL216C BUB2P26448 306 aaPredicted RBP0.95□□□□□ -2.26
RRI1YDL216C PRS3P38689 320 aaKnown RBP0.95□□□□□ -2.26
RRI1YDL216C SED1Q01589 338 aa0.95□□□□□ -2.26
RRI1YDL216C MIX14Q04341 121 aa0.95□□□□□ -2.26
RRI1YDL216C SEN15Q04675 128 aa0.95□□□□□ -2.26
RRI1YDL216C YPR202WQ08993 238 aa0.95□□□□□ -2.26
RRI1YDL216C YGR035W-AQ45U48 73 aa0.95□□□□□ -2.26
RRI1YDL216C YFR010W-AP0C5N0 62 aa0.94□□□□□ -2.26
RRI1YDL216C RPS27AP35997 82 aaKnown RBP0.94□□□□□ -2.26
RRI1YDL216C AME1P38313 324 aa0.94□□□□□ -2.26
RRI1YDL216C SLM6P38343 150 aa0.94□□□□□ -2.26
RRI1YDL216C RPS27BP38711 82 aa0.94□□□□□ -2.26
RRI1YDL216C YER181CP40097 107 aa0.94□□□□□ -2.26
RRI1YDL216C TIM8P57744 87 aa0.94□□□□□ -2.26
RRI1YDL216C GPI11Q06636 219 aa0.94□□□□□ -2.26
RRI1YDL216C RRT7Q07829 113 aa0.94□□□□□ -2.26
RRI1YDL216C Q0144Q9ZZW2 109 aa0.94□□□□□ -2.26
RRI1YDL216C RPL33AP05744 107 aaKnown RBP0.93□□□□□ -2.26
RRI1YDL216C YPR153WQ06537 140 aa0.93□□□□□ -2.26
RRI1YDL216C NSL1Q12143 216 aa0.93□□□□□ -2.26
RRI1YDL216C GPI2P46961 280 aa0.92□□□□□ -2.26
RRI1YDL216C VMA10P48836 114 aaKnown RBP0.92□□□□□ -2.26
RRI1YDL216C EFG1Q3E705 233 aaKnown RBP0.92□□□□□ -2.26
RRI1YDL216C QCR6P00127 147 aa0.91□□□□□ -2.26
RRI1YDL216C PHO13P19881 312 aa0.91□□□□□ -2.26
RRI1YDL216C SCS22Q6Q595 175 aa0.91□□□□□ -2.26
RRI1YDL216C MRPL24P36525 258 aaPredicted RBP0.9□□□□□ -2.26
RRI1YDL216C FIG1P38224 298 aa0.9□□□□□ -2.26
RRI1YDL216C GIM4P40005 111 aaKnown RBP0.9□□□□□ -2.26
RRI1YDL216C YMR141CP40211 102 aa0.9□□□□□ -2.26
RRI1YDL216C YIR020CP40575 100 aa0.9□□□□□ -2.26
RRI1YDL216C RTR2Q12378 196 aa0.9□□□□□ -2.26
RRI1YDL216C OCA6Q12454 224 aa0.9□□□□□ -2.26
RRI1YDL216C YSF3P0C074 85 aaPredicted RBP0.89□□□□□ -2.27
RRI1YDL216C NHP6AP11632 93 aaKnown RBP0.89□□□□□ -2.27
RRI1YDL216C IRC21Q04772 201 aa0.89□□□□□ -2.27
RRI1YDL216C SWC7Q06707 132 aa0.89□□□□□ -2.27
RRI1YDL216C DDR48P18899 430 aaKnown RBP0.89□□□□□ -2.27
RRI1YDL216C AUA1P32450 94 aa0.89□□□□□ -2.27
RRI1YDL216C DER1P38307 211 aa0.89□□□□□ -2.27
RRI1YDL216C YOR032W-AQ8TGS1 66 aa0.89□□□□□ -2.27
RRI1YDL216C YJL218WP40892 196 aaKnown RBP0.88□□□□□ -2.27
RRI1YDL216C YJL009WP47078 108 aa0.88□□□□□ -2.27
RRI1YDL216C DIE2P50076 525 aa0.88□□□□□ -2.27
RRI1YDL216C NKP2Q06162 153 aa0.88□□□□□ -2.27
RRI1YDL216C MHF1Q3E835 90 aa0.88□□□□□ -2.27
RRI1YDL216C GAT4P40569 121 aa0.87□□□□□ -2.27
RRI1YDL216C EST3Q03096 181 aa0.87□□□□□ -2.27
RRI1YDL216C RAV2Q03956 351 aa0.87□□□□□ -2.27
RRI1YDL216C RAF1Q06891 181 aa0.87□□□□□ -2.27
RRI1YDL216C LDB18Q07887 179 aa0.87□□□□□ -2.27
RRI1YDL216C PET20Q99373 253 aa0.87□□□□□ -2.27
RRI1YDL216C YHR214C-DP0CX93 97 aa0.86□□□□□ -2.27
RRI1YDL216C SUI1P32911 108 aaKnown RBP0.86□□□□□ -2.27
RRI1YDL216C SRL3P36167 246 aa0.86□□□□□ -2.27
RRI1YDL216C YCL048W-AQ2V2Q2 79 aa0.86□□□□□ -2.27
RRI1YDL216C YHR140WP38842 239 aa0.85□□□□□ -2.27
RRI1YDL216C YGL014C-AP0C5N1 53 aa0.84□□□□□ -2.28
RRI1YDL216C PET54P10834 293 aa0.84□□□□□ -2.28
RRI1YDL216C ARC19P33204 171 aaKnown RBP0.84□□□□□ -2.28
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms