RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 F11P03951 625 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 CSH1P0DML2 217 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 CSH2P0DML3 217 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 MCF2P10911 925 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 C6P13671 934 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 JUPP14923 745 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 IFNAR1P17181 557 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 SSRP1Q08945 709 aaKnown RBP10.33□□□□□ -0.76
HERC1-210ENST00000560897 SCRN1Q12765 414 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 SMARCB1Q12824 385 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 RESTQ13127 1097 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 KCNB1Q14721 858 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 DHRS13Q6UX07 377 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 PRICKLE2Q7Z3G6 844 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 BAHD1Q8TBE0 780 aaPredicted RBP10.33□□□□□ -0.76
HERC1-210ENST00000560897 SPPL2BQ8TCT7 592 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 SH3RF2Q8TEC5 729 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 BRF1Q92994 677 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 MIR1-1HGQ9H1L0 117 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 ABI2Q9NYB9 513 aaPredicted RBP10.33□□□□□ -0.76
HERC1-210ENST00000560897 PCDHA12Q9UN75 941 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 NID2Q14112 1375 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 PHLPP2Q6ZVD8 1323 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 STK36Q9NRP7 1315 aa10.33□□□□□ -0.76
HERC1-210ENST00000560897 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.32□□□□□ -0.76
HERC1-210ENST00000560897 M0R2N6 131 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 DEXIO95424 95 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 PDE6CP51160 858 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 CDR1P51861 262 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 NTRK3Q16288 839 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 INAVAQ3KP66 663 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 BROXQ5VW32 411 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 PADI6Q6TGC4 694 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 PCSK4Q6UW60 755 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 Q6ZUG5 572 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 NUDT18Q6ZVK8 323 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 TMEM150AQ86TG1 271 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 METTL23Q86XA0 190 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 FAM177A1Q8N128 213 aaPredicted RBP10.32□□□□□ -0.76
HERC1-210ENST00000560897 ZCCHC9Q8N567 271 aaKnown RBP10.32□□□□□ -0.76
HERC1-210ENST00000560897 FSIP1Q8NA03 581 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 SNIP1Q8TAD8 396 aaKnown RBP10.32□□□□□ -0.76
HERC1-210ENST00000560897 ZNF419Q96HQ0 510 aaPredicted RBP10.32□□□□□ -0.76
HERC1-210ENST00000560897 ACO2Q99798 780 aaKnown RBP10.32□□□□□ -0.76
HERC1-210ENST00000560897 ZDHHC4Q9NPG8 344 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 ARHGEF4Q9NR80 690 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 NXF1Q9UBU9 619 aaKnown RBP10.32□□□□□ -0.76
HERC1-210ENST00000560897 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.32□□□□□ -0.76
HERC1-210ENST00000560897 PCDHGB2Q9Y5G2 931 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 HEMK1Q9Y5R4 338 aaPredicted RBP10.32□□□□□ -0.76
HERC1-210ENST00000560897 DOPEY2Q9Y3R5 2298 aa10.32□□□□□ -0.76
HERC1-210ENST00000560897 ANTXRLA6NF34 631 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 CCDC169A6NNP5 214 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 CPLX1O14810 134 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 ADAM23O75077 832 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 IGHDP01880 384 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 HAPLN1P10915 354 aaPredicted RBP10.31□□□□□ -0.76
HERC1-210ENST00000560897 HOXB2P14652 356 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 GABRG2P18507 467 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 CYP11B2P19099 503 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 MAOBP27338 520 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 LRPAP1P30533 357 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 EIF2DP41214 584 aaKnown RBP10.31□□□□□ -0.76
HERC1-210ENST00000560897 GRIA2P42262 883 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 TNFRSF4P43489 277 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 AARSP49588 968 aaKnown RBP eCLIP10.31□□□□□ -0.76
HERC1-210ENST00000560897 KDSRQ06136 332 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 CCDC173Q0VFZ6 552 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 CALCRLQ16602 461 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 SDE2Q6IQ49 451 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 MPZL3Q6UWV2 235 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 PIK3AP1Q6ZUJ8 805 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 FMNL3Q8IVF7 1028 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 THEM5Q8N1Q8 247 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 ZNF513Q8N8E2 541 aaPredicted RBP10.31□□□□□ -0.76
HERC1-210ENST00000560897 OR10T2Q8NGX3 314 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 KIFAP3Q92845 792 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 FGF11Q92914 225 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 TMEM176AQ96HP8 235 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 LGMNQ99538 433 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 ZCWPW1Q9H0M4 648 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 LINC00597Q9H2U6 94 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 IL21RQ9HBE5 538 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 DSEQ9UL01 958 aa10.31□□□□□ -0.76
HERC1-210ENST00000560897 UBQLN1Q9UMX0 589 aaKnown RBP10.31□□□□□ -0.76
HERC1-210ENST00000560897 FNDC3AQ9Y2H6 1198 aaKnown RBP10.31□□□□□ -0.76
HERC1-210ENST00000560897 CABIN1Q9Y6J0 2220 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 TBC1D3BA6NDS4 549 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 SLC9A3R1O14745 358 aaPredicted RBP10.3□□□□□ -0.76
HERC1-210ENST00000560897 ADH1CP00326 375 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 HMGA1P17096 107 aaKnown RBP10.3□□□□□ -0.76
HERC1-210ENST00000560897 CYP3A5P20815 502 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 PAX3P23760 479 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 ACTN2P35609 894 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 MATR3P43243 847 aaKnown RBP eCLIP10.3□□□□□ -0.76
HERC1-210ENST00000560897 GRK6P43250 576 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 KIR2DL1P43626 348 aaPredicted RBP10.3□□□□□ -0.76
HERC1-210ENST00000560897 UCNP55089 124 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 TMPRSS3P57727 454 aa10.3□□□□□ -0.76
HERC1-210ENST00000560897 CCT2P78371 535 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms