RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 MRE11P49959 708 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 BCAT1P54687 386 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 JAM2P57087 298 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 SNX16P57768 344 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 ITIH3Q06033 890 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 KCNC3Q14003 757 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 COL19A1Q14993 1142 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 CCDC85BQ15834 202 aaPredicted RBP8.09□□□□□ -1.11
TDP1-214ENST00000556063 ASIC2Q16515 512 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 MEA1Q16626 185 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 CTC1Q2NKJ3 1217 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 ATAT1Q5SQI0 421 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 PPP1R26Q5T8A7 1209 aaPredicted RBP8.09□□□□□ -1.11
TDP1-214ENST00000556063 ANKRD54Q6NXT1 300 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 LCLAT1Q6UWP7 414 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 TRIM72Q6ZMU5 477 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 TMC6Q7Z403 805 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 VPS36Q86VN1 386 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 ZNF677Q86XU0 584 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 FUKQ8N0W3 1084 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 C12orf29Q8N999 325 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 ANKRD52Q8NB46 1076 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 LEMD2Q8NC56 503 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 MAFAQ8NHW3 353 aaPredicted RBP8.09□□□□□ -1.11
TDP1-214ENST00000556063 CPLX3Q8WVH0 158 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 ZNF606Q8WXB4 792 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 SYN2Q92777 582 aaPredicted RBP8.09□□□□□ -1.11
TDP1-214ENST00000556063 HLA-CQ95604 372 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 C8orf48Q96LL4 319 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 NOX5Q96PH1 765 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 DUSP16Q9BY84 665 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 B3GNT5Q9BYG0 378 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 RHOBTB2Q9BYZ6 727 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 ZNF518BQ9C0D4 1074 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 GRPEL1Q9HAV7 217 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 KRT82Q9NSB4 513 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 CAPN11Q9UMQ6 739 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 SLC27A5Q9Y2P5 690 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 YIPF1Q9Y548 306 aa8.09□□□□□ -1.11
TDP1-214ENST00000556063 BZW2Q9Y6E2 419 aaKnown RBP8.09□□□□□ -1.11
TDP1-214ENST00000556063 PLXNA3P51805 1871 aa8.09□□□□□ -1.12
TDP1-214ENST00000556063 PTPRDP23468 1912 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 CCDC195A0A1B0GUA6 201 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 LRRC53A6NM62 1247 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 RNF225M0QZC1 329 aaPredicted RBP8.08□□□□□ -1.12
TDP1-214ENST00000556063 CLDN5O00501 218 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 RTN3O95197 1032 aaPredicted RBP8.08□□□□□ -1.12
TDP1-214ENST00000556063 SEC24AO95486 1093 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 ADCY5O95622 1261 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 FGF19O95750 216 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 CYP11B1P15538 503 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 PTPN2P17706 415 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 CDC25BP30305 580 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 GTF2F1P35269 517 aaKnown RBP eCLIP8.08□□□□□ -1.12
TDP1-214ENST00000556063 CLCN1P35523 988 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 MTHFRP42898 656 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 ARID5AQ03989 594 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 BST2Q10589 180 aaKnown RBP8.08□□□□□ -1.12
TDP1-214ENST00000556063 TWF1Q12792 350 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 PTPN21Q16825 1174 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 AAK1Q2M2I8 961 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 GOLGA7BQ2TAP0 167 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 RARS2Q5T160 578 aaKnown RBP8.08□□□□□ -1.12
TDP1-214ENST00000556063 CYP4A22Q5TCH4 519 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.08□□□□□ -1.12
TDP1-214ENST00000556063 SLC47A2Q86VL8 602 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 CNGA4Q8IV77 575 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 TMEM35BQ8NCS4 154 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 MSANTD4Q8NCY6 345 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 VN1R2Q8NFZ6 395 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 OR8K1Q8NGG5 319 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 TFAP2BQ92481 460 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 SMG7Q92540 1137 aaKnown RBP8.08□□□□□ -1.12
TDP1-214ENST00000556063 BAP1Q92560 729 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 SPATA17Q96L03 361 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 RIPOR3Q96MK2 946 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 NECTIN4Q96NY8 510 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 PRKD2Q9BZL6 878 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 UBXN6Q9BZV1 441 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 TTYH3Q9C0H2 523 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 MIS12Q9H081 205 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 ADAM7Q9H2U9 754 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 UBE2ZQ9H832 354 aaPredicted RBP8.08□□□□□ -1.12
TDP1-214ENST00000556063 LRRC4Q9HBW1 653 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 PNPLA8Q9NP80 782 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 COMMD8Q9NX08 183 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 AIPL1Q9NZN9 384 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 UXTQ9UBK9 157 aaPredicted RBP8.08□□□□□ -1.12
TDP1-214ENST00000556063 CD207Q9UJ71 328 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 AJAP1Q9UKB5 411 aaPredicted RBP8.08□□□□□ -1.12
TDP1-214ENST00000556063 TSPAN16Q9UKR8 245 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.08□□□□□ -1.12
TDP1-214ENST00000556063 FAM50BQ9Y247 325 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 SSUH2Q9Y2M2 353 aa8.08□□□□□ -1.12
TDP1-214ENST00000556063 AKR1B15C9JRZ8 316 aaPredicted RBP8.07□□□□□ -1.12
TDP1-214ENST00000556063 F8VP50 259 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 M0QYV0 167 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 ZNF197O14709 1029 aa8.07□□□□□ -1.12
TDP1-214ENST00000556063 XPO1O14980 1071 aaKnown RBP8.07□□□□□ -1.12
TDP1-214ENST00000556063 CCL16O15467 120 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms