RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 TNFRSF4P43489 277 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 NFATC3Q12968 1075 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 TARDBPQ13148 414 aaKnown RBP eCLIP12.51□□□□□ -0.41
HDAC6-233ENST00000489352 SERINC3Q13530 473 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 ZNF77Q15935 545 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 PTPRNQ16849 979 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 SLC39A12Q504Y0 691 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 SDE2Q6IQ49 451 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 DBX2Q6ZNG2 339 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 NUDT18Q6ZVK8 323 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 ZCCHC9Q8N567 271 aaKnown RBP12.51□□□□□ -0.41
HDAC6-233ENST00000489352 BTBD3Q9Y2F9 522 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 NID2Q14112 1375 aa12.51□□□□□ -0.41
HDAC6-233ENST00000489352 BRINP1O60477 761 aa12.5□□□□□ -0.41
HDAC6-233ENST00000489352 ADAM23O75077 832 aa12.5□□□□□ -0.41
HDAC6-233ENST00000489352 HOXB2P14652 356 aa12.5□□□□□ -0.41
HDAC6-233ENST00000489352 ATF6P18850 670 aa12.5□□□□□ -0.41
HDAC6-233ENST00000489352 RARRES1P49788 294 aa12.5□□□□□ -0.41
HDAC6-233ENST00000489352 CDR1P51861 262 aa12.5□□□□□ -0.41
HDAC6-233ENST00000489352 UBAP2LQ14157 1087 aaKnown RBP12.5□□□□□ -0.41
HDAC6-233ENST00000489352 INF2Q27J81 1249 aa12.5□□□□□ -0.41
HDAC6-233ENST00000489352 XKR4Q5GH76 650 aa12.5□□□□□ -0.41
HDAC6-233ENST00000489352 ATG14Q6ZNE5 492 aa12.5□□□□□ -0.41
HDAC6-233ENST00000489352 SH3RF2Q8TEC5 729 aa12.5□□□□□ -0.41
HDAC6-233ENST00000489352 CYP2S1Q96SQ9 504 aa12.5□□□□□ -0.41
HDAC6-233ENST00000489352 TCHPQ9BT92 498 aa12.5□□□□□ -0.41
HDAC6-233ENST00000489352 TMEM206Q9H813 350 aa12.5□□□□□ -0.41
HDAC6-233ENST00000489352 ARHGEF4Q9NR80 690 aa12.5□□□□□ -0.41
HDAC6-233ENST00000489352 UXTQ9UBK9 157 aaPredicted RBP12.5□□□□□ -0.41
HDAC6-233ENST00000489352 NBPF19A0A087WUL8 3843 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 TBC1D3BA6NDS4 549 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-233ENST00000489352 BCAT2O15382 392 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-233ENST00000489352 CHMLP26374 656 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 GRIA2P42262 883 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 KIR2DL1P43626 348 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-233ENST00000489352 CCR10P46092 362 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 EFNA5P52803 228 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 USP4Q13107 963 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 RESTQ13127 1097 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 PPP2R5AQ15172 486 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 TBC1D25Q3MII6 688 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 ZNF568Q3ZCX4 644 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 TMEM150AQ86TG1 271 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 ZNF513Q8N8E2 541 aaPredicted RBP12.49□□□□□ -0.41
HDAC6-233ENST00000489352 CEP120Q8N960 986 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 PIGOQ8TEQ8 1089 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 EIF2AK1Q9BQI3 630 aaKnown RBP12.49□□□□□ -0.41
HDAC6-233ENST00000489352 KCNMB3Q9NPA1 279 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 GMIPQ9P107 970 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 CNTN3Q9P232 1028 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 PCDHA4Q9UN74 947 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 RELNP78509 3460 aa12.49□□□□□ -0.41
HDAC6-233ENST00000489352 STK36Q9NRP7 1315 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 K7ERI5 159 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 SLC27A2O14975 620 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 SGSM2O43147 1006 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 CCNT1O60563 726 aaKnown RBP12.48□□□□□ -0.41
HDAC6-233ENST00000489352 LYPLA2O95372 231 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 CSH1P0DML2 217 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 CSH2P0DML3 217 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 ODC1P11926 461 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 MYF5P13349 255 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 NAMPTP43490 491 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 SLC6A11P48066 632 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 RCAN1P53805 252 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 PCBP4P57723 403 aaKnown RBP12.48□□□□□ -0.41
HDAC6-233ENST00000489352 KDSRQ06136 332 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 VAC14Q08AM6 782 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 KCNB1Q14721 858 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 SFTPA1Q8IWL2 248 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 SLFN12Q8IYM2 578 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 FSIP1Q8NA03 581 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 KCNV2Q8TDN2 545 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 C2orf15Q8WU43 125 aaKnown RBP12.48□□□□□ -0.41
HDAC6-233ENST00000489352 TTC9Q92623 222 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 IFT74Q96LB3 600 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 CCDC113Q9H0I3 377 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 SH3GLB2Q9NR46 395 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 TNFSF13BQ9Y275 285 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 NFE2L3Q9Y4A8 694 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 PCDHGA1Q9Y5H4 931 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 TCHHQ07283 1943 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 ANAPC1Q9H1A4 1944 aa12.48□□□□□ -0.41
HDAC6-233ENST00000489352 BOD1L1Q8NFC6 3051 aa12.47□□□□□ -0.41
HDAC6-233ENST00000489352 EDN1P05305 212 aa12.47□□□□□ -0.41
HDAC6-233ENST00000489352 C1SP09871 688 aa12.47□□□□□ -0.41
HDAC6-233ENST00000489352 NCAM1P13591 858 aa12.47□□□□□ -0.41
HDAC6-233ENST00000489352 GCFC2P16383 781 aaKnown RBP12.47□□□□□ -0.41
HDAC6-233ENST00000489352 TYMPP19971 482 aa12.47□□□□□ -0.41
HDAC6-233ENST00000489352 EIF2DP41214 584 aaKnown RBP12.47□□□□□ -0.41
HDAC6-233ENST00000489352 WASP42768 502 aa12.47□□□□□ -0.41
HDAC6-233ENST00000489352 SMARCB1Q12824 385 aa12.47□□□□□ -0.41
HDAC6-233ENST00000489352 NT5DC1Q5TFE4 455 aa12.47□□□□□ -0.41
HDAC6-233ENST00000489352 KIAA1324Q6UXG2 1013 aaKnown RBP12.47□□□□□ -0.41
HDAC6-233ENST00000489352 USP49Q70CQ1 688 aa12.47□□□□□ -0.41
HDAC6-233ENST00000489352 BLIDQ8IZY5 108 aa12.47□□□□□ -0.41
HDAC6-233ENST00000489352 ARL14EPQ8N8R7 260 aaPredicted RBP12.47□□□□□ -0.41
HDAC6-233ENST00000489352 SPPL2BQ8TCT7 592 aa12.47□□□□□ -0.41
HDAC6-233ENST00000489352 DNASE2BQ8WZ79 361 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms