RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 PRKCIP41743 596 aa11□□□□□ -0.65
CASC3-204ENST00000474190 GPD2P43304 727 aa11□□□□□ -0.65
CASC3-204ENST00000474190 PGFP49763 221 aa11□□□□□ -0.65
CASC3-204ENST00000474190 TSPY1Q01534 308 aa11□□□□□ -0.65
CASC3-204ENST00000474190 FMO1Q01740 532 aa11□□□□□ -0.65
CASC3-204ENST00000474190 SMARCB1Q12824 385 aa11□□□□□ -0.65
CASC3-204ENST00000474190 CNGA2Q16280 664 aa11□□□□□ -0.65
CASC3-204ENST00000474190 MEA1Q16626 185 aa11□□□□□ -0.65
CASC3-204ENST00000474190 DDR2Q16832 855 aa11□□□□□ -0.65
CASC3-204ENST00000474190 ASTE1Q2TB18 679 aaPredicted RBP11□□□□□ -0.65
CASC3-204ENST00000474190 DENND1BQ6P3S1 775 aa11□□□□□ -0.65
CASC3-204ENST00000474190 BHLHA9Q7RTU4 235 aa11□□□□□ -0.65
CASC3-204ENST00000474190 TMC6Q7Z403 805 aa11□□□□□ -0.65
CASC3-204ENST00000474190 DCP1BQ8IZD4 617 aaKnown RBP11□□□□□ -0.65
CASC3-204ENST00000474190 C12orf76Q8N812 135 aaPredicted RBP11□□□□□ -0.65
CASC3-204ENST00000474190 SLC35F5Q8WV83 523 aa11□□□□□ -0.65
CASC3-204ENST00000474190 CYFIP2Q96F07 1278 aa11□□□□□ -0.65
CASC3-204ENST00000474190 FUBP3Q96I24 572 aaKnown RBP eCLIP11□□□□□ -0.65
CASC3-204ENST00000474190 TNIP3Q96KP6 325 aa11□□□□□ -0.65
CASC3-204ENST00000474190 FAM81BQ96LP2 452 aa11□□□□□ -0.65
CASC3-204ENST00000474190 HEXIM2Q96MH2 286 aaKnown RBP11□□□□□ -0.65
CASC3-204ENST00000474190 MAN1C1Q9NR34 630 aa11□□□□□ -0.65
CASC3-204ENST00000474190 ABI2Q9NYB9 513 aaPredicted RBP11□□□□□ -0.65
CASC3-204ENST00000474190 TSPAN16Q9UKR8 245 aa11□□□□□ -0.65
CASC3-204ENST00000474190 MAFFQ9ULX9 164 aa11□□□□□ -0.65
CASC3-204ENST00000474190 YIPF1Q9Y548 306 aa11□□□□□ -0.65
CASC3-204ENST00000474190 INSL5Q9Y5Q6 135 aa11□□□□□ -0.65
CASC3-204ENST00000474190 F8VP50 259 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 ZMYND10O75800 440 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 MMEP08473 750 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 PLEKP08567 350 aaPredicted RBP10.99□□□□□ -0.65
CASC3-204ENST00000474190 CPB1P15086 417 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 IGFBP4P22692 258 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 ADORA2BP29275 332 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 CDH5P33151 784 aaPredicted RBP10.99□□□□□ -0.65
CASC3-204ENST00000474190 STAT1P42224 750 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 ADKP55263 362 aaKnown RBP10.99□□□□□ -0.65
CASC3-204ENST00000474190 USP46P62068 366 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 YWHAEP62258 255 aaKnown RBP10.99□□□□□ -0.65
CASC3-204ENST00000474190 ZBED6P86452 979 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 PLCB2Q00722 1185 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 MTMR3Q13615 1198 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 GSE1Q14687 1217 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 NFE2Q16621 373 aaPredicted RBP10.99□□□□□ -0.65
CASC3-204ENST00000474190 RAB41Q5JT25 222 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 LLGL2Q6P1M3 1020 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 ZNF571Q7Z3V5 609 aaPredicted RBP10.99□□□□□ -0.65
CASC3-204ENST00000474190 TMEM150AQ86TG1 271 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 TMC8Q8IU68 726 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 TMEM139Q8IV31 216 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 ANKRD52Q8NB46 1076 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 SLC30A5Q8TAD4 765 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 SLC7A14Q8TBB6 771 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 SPPL2BQ8TCT7 592 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 GPR152Q8TDT2 470 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 C2orf15Q8WU43 125 aaKnown RBP10.99□□□□□ -0.65
CASC3-204ENST00000474190 HDAC7Q8WUI4 952 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 CPLX3Q8WVH0 158 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 SYN2Q92777 582 aaPredicted RBP10.99□□□□□ -0.65
CASC3-204ENST00000474190 C8orf48Q96LL4 319 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 NUP58Q9BVL2 599 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 DUSP16Q9BY84 665 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 IGFLR1Q9H665 355 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 KRT82Q9NSB4 513 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 ARHGAP20Q9P2F6 1191 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 TJP2Q9UDY2 1190 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 KIAA1257Q9ULG3 409 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 PCDHGC3Q9UN70 934 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 PCDHB5Q9Y5E4 795 aa10.99□□□□□ -0.65
CASC3-204ENST00000474190 FAM92AA1XBS5 289 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 DDX3XO00571 662 aaKnown RBP eCLIP10.98□□□□□ -0.65
CASC3-204ENST00000474190 MOSPD3O75425 235 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 TADA3O75528 432 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 CYP1A1P04798 512 aaPredicted RBP10.98□□□□□ -0.65
CASC3-204ENST00000474190 C8AP07357 584 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 POU2F2P09086 479 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 SKILP12757 684 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 GNA15P30679 374 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 KRT9P35527 623 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 CCR2P41597 374 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 CYP27A1Q02318 531 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 PTK2Q05397 1052 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 PDE4CQ08493 712 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 PTP4A2Q12974 167 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 GOLGA7BQ2TAP0 167 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 SGO2Q562F6 1265 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 ANKRD54Q6NXT1 300 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 PMF1Q6P1K2 205 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 VSTM1Q6UX27 236 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 PPFIBP1Q86W92 1011 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 CMASQ8NFW8 434 aaPredicted RBP10.98□□□□□ -0.65
CASC3-204ENST00000474190 UBA3Q8TBC4 463 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 PPM1EQ8WY54 764 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 PABPC5Q96DU9 382 aaKnown RBP10.98□□□□□ -0.65
CASC3-204ENST00000474190 PDLIM2Q96JY6 352 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 SPATA17Q96L03 361 aa10.98□□□□□ -0.65
CASC3-204ENST00000474190 PCMTD1Q96MG8 357 aaPredicted RBP10.98□□□□□ -0.65
CASC3-204ENST00000474190 UHRF1Q96T88 793 aaPredicted RBP10.98□□□□□ -0.65
CASC3-204ENST00000474190 GAS2L1Q99501 681 aaPredicted RBP10.98□□□□□ -0.65
CASC3-204ENST00000474190 PLEKHA4Q9H4M7 779 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms