RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 CTRB2Q6GPI1 263 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 CORO6Q6QEF8 472 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 PGAP1Q75T13 922 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 FAM178BQ8IXR5 827 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 CHPFQ8IZ52 775 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 MROH8Q9H579 483 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 CD93Q9NPY3 652 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 FETUBQ9UGM5 382 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 ITGA10O75578 1167 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 CTAG1AP78358 180 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 IMPG1Q17R60 797 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 CHPT1Q8WUD6 406 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 ELMO1Q92556 727 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 FAM111AQ96PZ2 611 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 FRMD8Q9BZ67 464 aaPredicted RBP3.9□□□□□ -1.78
SYNE2-202ENST00000344113 CHORDC1Q9UHD1 332 aaPredicted RBP3.9□□□□□ -1.78
SYNE2-202ENST00000344113 CFTRP13569 1480 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 SHANK2Q9UPX8 1470 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 PRKD3O94806 890 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 CACNA2D1P54289 1103 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 NIPA1Q7RTP0 329 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF555Q8NEP9 628 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 DEPDC1BQ8WUY9 529 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 KCTD4Q8WVF5 259 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 KLHL6Q8WZ60 621 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 DCLK3Q9C098 648 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 IL1RL2Q9HB29 575 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 TELO2Q9Y4R8 837 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 EME2A4GXA9 379 aaPredicted RBP3.9□□□□□ -1.78
SYNE2-202ENST00000344113 BTN3A1O00481 513 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 FBP2O00757 339 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 SSX5O60225 188 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 MRPS14O60783 128 aaKnown RBP3.9□□□□□ -1.78
SYNE2-202ENST00000344113 PTPN4P29074 926 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 TOP3AQ13472 1001 aaPredicted RBP3.9□□□□□ -1.78
SYNE2-202ENST00000344113 FGD2Q7Z6J4 655 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 FAM71DQ8N9W8 422 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 GTF2A1LQ9UNN4 478 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 N6AMT1Q9Y5N5 214 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 ABCA1O95477 2261 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 SLC22A2O15244 555 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 HLA-FP30511 346 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 TBC1D19Q8N5T2 526 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 FAM133AQ8N9E0 248 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 TSR2Q969E8 191 aaKnown RBP3.9□□□□□ -1.78
SYNE2-202ENST00000344113 DUSP9Q99956 384 aaKnown RBP3.9□□□□□ -1.78
SYNE2-202ENST00000344113 CYB5R1Q9UHQ9 305 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 CHP2O43745 196 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 CCNE2O96020 404 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 BPIFB4P59827 614 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 HERC3Q15034 1050 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF772Q68DY9 489 aaPredicted RBP3.9□□□□□ -1.78
SYNE2-202ENST00000344113 BNC2Q6ZN30 1099 aaPredicted RBP3.9□□□□□ -1.78
SYNE2-202ENST00000344113 TPGS1Q6ZTW0 290 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 ATPAF2Q8N5M1 289 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 SSX3Q99909 188 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 KLC2Q9H0B6 622 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 ATP8A2Q9NTI2 1148 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 NRXN1Q9ULB1 1477 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 PIK3R1P27986 724 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 HTR7P34969 479 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 Q6ZNX1 250 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 MB21D2Q8IYB1 491 aaPredicted RBP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 TTYH2Q9BSA4 534 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 WDR26Q9H7D7 661 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 RMND5AQ9H871 391 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 SORBS3O60504 671 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 RPL4P36578 427 aaKnown RBP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 FBXL13Q8NEE6 735 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 SIAEQ9HAT2 523 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 GPR108Q9NPR9 543 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 SYNJ1O43426 1573 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 NARSO43776 548 aaKnown RBP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 ZNF846Q147U1 533 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 WDR49Q8IV35 697 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 GAREM1Q9H706 876 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 RAD18Q9NS91 495 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 USP20Q9Y2K6 914 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 CABIN1Q9Y6J0 2220 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 DNAJC6O75061 913 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 STX11O75558 287 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 HSPA4LO95757 839 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 RPL9P32969 192 aaKnown RBP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 TAF5Q15542 800 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 MAPKAPK5Q8IW41 473 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 MTURNQ8N3F0 131 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 L3MBTL1Q9Y468 752 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 A0A1W2PQJ5 194 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 H0YCG3 227 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 SEMA3DO95025 777 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 COPAP53621 1224 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 RELAQ04206 551 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 TRIP4Q15650 581 aaPredicted RBP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 FXNQ16595 210 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 ZMAT1Q5H9K5 638 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 TAF2Q6P1X5 1199 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 ANKRD42Q8N9B4 389 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 ERMAPQ96PL5 475 aaPredicted RBP3.9□□□□□ -1.79
SYNE2-202ENST00000344113 C1orf21Q9H246 121 aa3.9□□□□□ -1.79
SYNE2-202ENST00000344113 NDST4Q9H3R1 872 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms