RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 PLEKHA5Q9HAU0 1116 aa5□□□□□ -1.61
UBR1-201ENST00000290650 DDX20Q9UHI6 824 aaKnown RBP5□□□□□ -1.61
UBR1-201ENST00000290650 CICQ96RK0 1608 aaPredicted RBP4.99□□□□□ -1.61
UBR1-201ENST00000290650 MYH7BA7E2Y1 1941 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 TRIM49D1C9J1S8 452 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 H3BRJ5 948 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 EEF2KO00418 725 aaKnown RBP4.99□□□□□ -1.61
UBR1-201ENST00000290650 AVILO75366 819 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 CCNE2O96020 404 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 DRP2Q13474 957 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 DGKDQ16760 1214 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 ACCSLQ4AC99 568 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 BTBD8Q5XKL5 378 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 MIB1Q86YT6 1006 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 KIAA0319LQ8IZA0 1049 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 TTC13Q8NBP0 860 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 SCFD2Q8WU76 684 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 IFT43Q96FT9 208 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 PCDHB18PQ96TA0 734 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 SP110Q9HB58 689 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 RRAGCQ9HB90 399 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 C20orf96Q9NUD7 363 aaPredicted RBP4.99□□□□□ -1.61
UBR1-201ENST00000290650 CACNG4Q9UBN1 327 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.99□□□□□ -1.61
UBR1-201ENST00000290650 COL14A1Q05707 1796 aaKnown RBP4.99□□□□□ -1.61
UBR1-201ENST00000290650 UBR2Q8IWV8 1755 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 HBP1O60381 514 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 AGTP01019 485 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 GLRA2P23416 452 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 CDK17Q00537 523 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 CUL3Q13618 768 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 EFTUD2Q15029 972 aaKnown RBP eCLIP4.99□□□□□ -1.61
UBR1-201ENST00000290650 KLHL38Q2WGJ6 581 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 MPZL3Q6UWV2 235 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 PDZD8Q8NEN9 1154 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 PRCCQ92733 491 aaPredicted RBP4.99□□□□□ -1.61
UBR1-201ENST00000290650 TMA16Q96EY4 203 aaKnown RBP4.99□□□□□ -1.61
UBR1-201ENST00000290650 CYP39A1Q9NYL5 469 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 TSPAN16Q9UKR8 245 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 APOBEC2Q9Y235 224 aaKnown RBP4.99□□□□□ -1.61
UBR1-201ENST00000290650 ANGPTL3Q9Y5C1 460 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 PDHXO00330 501 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 KRT38O76015 456 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 PTENP60484 403 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 TSPY1Q01534 308 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 ATG16L1Q676U5 607 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 THEM5Q8N1Q8 247 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 RMDN1Q96DB5 314 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 LPIN3Q9BQK8 851 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 KIAA1683Q9H0B3 1180 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 NEUROG2Q9H2A3 272 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 DDIT4Q9NX09 232 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 NAALADL1Q9UQQ1 740 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 NR2E3Q9Y5X4 410 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 SMCHD1A6NHR9 2005 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 H3BRB1 525 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 CLDN5O00501 218 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 RIPK2O43353 540 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 CDH16O75309 829 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 DCTN3O75935 186 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 FAM107AO95990 144 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 F7P08709 466 aaPredicted RBP4.99□□□□□ -1.61
UBR1-201ENST00000290650 SP100P23497 879 aaPredicted RBP4.99□□□□□ -1.61
UBR1-201ENST00000290650 TAS2R40P59535 323 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 SEMA3FQ13275 785 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 DBN1Q16643 649 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 HGSNATQ68CP4 663 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 MOXD1Q6UVY6 613 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 NDUFAF2Q8N183 169 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 TMEM161BQ8NDZ6 487 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 MKL1Q969V6 931 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 KREMEN1Q96MU8 473 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 TTC25Q96NG3 672 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 HSD17B14Q9BPX1 270 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 TUT1Q9H6E5 874 aaKnown RBP4.99□□□□□ -1.61
UBR1-201ENST00000290650 PSMC3IPQ9P2W1 217 aaPredicted RBP4.99□□□□□ -1.61
UBR1-201ENST00000290650 COG5Q9UP83 839 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 TRIM33Q9UPN9 1127 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 TELO2Q9Y4R8 837 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 MEI4A8MW99 385 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 SPECC1L-ADORA2AF8WAN1 911 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 KCNK1O00180 336 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 UBOX5O94941 541 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 ABCD1P33897 745 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 CAV1Q03135 178 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 NFIL3Q16649 462 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 SPOCD1Q6ZMY3 1216 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 TTC30AQ86WT1 665 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 SPATA2LQ8IUW3 424 aaPredicted RBP4.99□□□□□ -1.61
UBR1-201ENST00000290650 EFHBQ8N7U6 833 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 CHST13Q8NET6 341 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 LRGUKQ96M69 825 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 CGRRF1Q99675 332 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 GOLGA2P5Q9HBQ8 144 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 CYP4F12Q9HCS2 524 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 LAMB4A4D0S4 1761 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 NAV1Q8NEY1 1877 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 E5RJQ4 531 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 AIM2O14862 343 aa4.99□□□□□ -1.61
UBR1-201ENST00000290650 CST3P01034 146 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms