RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C YHR180WP38868 163 aa2.04□□□□□ -2.08
DNL4YOR005C YOR105WQ08504 108 aa2.04□□□□□ -2.08
DNL4YOR005C YPL257WQ08974 193 aa2.04□□□□□ -2.08
DNL4YOR005C YDL157CQ12082 118 aa2.04□□□□□ -2.08
DNL4YOR005C SMT3Q12306 101 aaKnown RBP2.04□□□□□ -2.08
DNL4YOR005C YPR108W-AQ3E7B3 70 aa2.04□□□□□ -2.08
DNL4YOR005C SCO1P23833 295 aa2.04□□□□□ -2.08
DNL4YOR005C OCH1P31755 480 aa2.04□□□□□ -2.08
DNL4YOR005C SRP21P32342 167 aa2.04□□□□□ -2.08
DNL4YOR005C AGA2P32781 87 aa2.04□□□□□ -2.08
DNL4YOR005C FMP46P36141 133 aaKnown RBP2.04□□□□□ -2.08
DNL4YOR005C PRE5P40302 234 aaKnown RBP2.04□□□□□ -2.08
DNL4YOR005C RPA43P46669 326 aa2.04□□□□□ -2.08
DNL4YOR005C YML079WQ03629 201 aa2.04□□□□□ -2.08
DNL4YOR005C PKR1Q03880 122 aaKnown RBP2.04□□□□□ -2.08
DNL4YOR005C CSI2Q08054 341 aa2.04□□□□□ -2.08
DNL4YOR005C YPL162CQ12042 273 aa2.04□□□□□ -2.08
DNL4YOR005C MRS1P07266 363 aa2.03□□□□□ -2.08
DNL4YOR005C HMRA1P0CY11 126 aa2.03□□□□□ -2.08
DNL4YOR005C APS1P35181 156 aa2.03□□□□□ -2.08
DNL4YOR005C YKR041WP36134 250 aa2.03□□□□□ -2.08
DNL4YOR005C SMP1P38128 452 aa2.03□□□□□ -2.08
DNL4YOR005C YER188WP40103 239 aa2.03□□□□□ -2.08
DNL4YOR005C CCS1P40202 249 aaKnown RBP2.03□□□□□ -2.08
DNL4YOR005C YGL230CP53074 147 aa2.03□□□□□ -2.08
DNL4YOR005C ECM19Q06011 112 aa2.03□□□□□ -2.08
DNL4YOR005C RFU1Q08003 200 aa2.03□□□□□ -2.08
DNL4YOR005C DFM1Q12743 341 aaKnown RBP2.03□□□□□ -2.08
DNL4YOR005C PAI3P01094 68 aa2.03□□□□□ -2.09
DNL4YOR005C RPB7P34087 171 aa2.03□□□□□ -2.09
DNL4YOR005C PRY2P36110 329 aa2.03□□□□□ -2.09
DNL4YOR005C EDC2P40023 145 aaPredicted RBP2.03□□□□□ -2.09
DNL4YOR005C YGR269WP40326 108 aa2.03□□□□□ -2.09
DNL4YOR005C GEP7P53171 287 aa2.03□□□□□ -2.09
DNL4YOR005C UPS3Q04006 179 aa2.03□□□□□ -2.09
DNL4YOR005C NAT3Q06504 195 aa2.03□□□□□ -2.09
DNL4YOR005C YPR174CQ06616 221 aaPredicted RBP2.03□□□□□ -2.09
DNL4YOR005C NIP7Q08962 181 aaKnown RBP2.03□□□□□ -2.09
DNL4YOR005C YMR230W-AQ3E7B5 62 aa2.03□□□□□ -2.09
DNL4YOR005C YBL008W-AQ3E821 79 aa2.03□□□□□ -2.09
DNL4YOR005C CCH1P50077 2039 aa2.03□□□□□ -2.09
DNL4YOR005C MBF1O14467 151 aaKnown RBP2.02□□□□□ -2.09
DNL4YOR005C MRS4P23500 304 aa2.02□□□□□ -2.09
DNL4YOR005C YHL044WP38727 235 aa2.02□□□□□ -2.09
DNL4YOR005C TEM1P38987 245 aa2.02□□□□□ -2.09
DNL4YOR005C YER134CP40081 178 aa2.02□□□□□ -2.09
DNL4YOR005C PGU1P47180 361 aa2.02□□□□□ -2.09
DNL4YOR005C MIC27P50945 234 aa2.02□□□□□ -2.09
DNL4YOR005C YGL118CP53132 145 aa2.02□□□□□ -2.09
DNL4YOR005C YGR018CP53211 109 aa2.02□□□□□ -2.09
DNL4YOR005C SWT21P53873 357 aaPredicted RBP2.02□□□□□ -2.09
DNL4YOR005C YPL039WQ03080 316 aa2.02□□□□□ -2.09
DNL4YOR005C HRD1Q08109 551 aa2.02□□□□□ -2.09
DNL4YOR005C YLR050CQ12155 161 aaKnown RBP2.02□□□□□ -2.09
DNL4YOR005C YPS3Q12303 508 aa2.02□□□□□ -2.09
DNL4YOR005C TIM22Q12328 207 aa2.02□□□□□ -2.09
DNL4YOR005C HUG1Q6Q5K6 68 aa2.02□□□□□ -2.09
DNL4YOR005C RPL30P14120 105 aaKnown RBP2.02□□□□□ -2.09
DNL4YOR005C SWD3P38123 315 aa2.02□□□□□ -2.09
DNL4YOR005C DER1P38307 211 aa2.02□□□□□ -2.09
DNL4YOR005C MSL1P40567 111 aaPredicted RBP2.02□□□□□ -2.09
DNL4YOR005C CGI121Q03705 181 aaKnown RBP2.02□□□□□ -2.09
DNL4YOR005C YLR363W-AQ3E747 85 aa2.02□□□□□ -2.09
DNL4YOR005C TAD3Q9URQ3 322 aa2.02□□□□□ -2.09
DNL4YOR005C SOD1P00445 154 aaKnown RBP2.01□□□□□ -2.09
DNL4YOR005C YSF3P0C074 85 aaPredicted RBP2.01□□□□□ -2.09
DNL4YOR005C RPB9P27999 122 aa2.01□□□□□ -2.09
DNL4YOR005C YOX1P34161 385 aa2.01□□□□□ -2.09
DNL4YOR005C YJL028WP47062 111 aa2.01□□□□□ -2.09
DNL4YOR005C RIM9Q04734 239 aa2.01□□□□□ -2.09
DNL4YOR005C ATG39Q06159 398 aa2.01□□□□□ -2.09
DNL4YOR005C SLO1Q3E784 85 aa2.01□□□□□ -2.09
DNL4YOR005C SEC11P15367 167 aa2.01□□□□□ -2.09
DNL4YOR005C MIG1P27705 504 aa2.01□□□□□ -2.09
DNL4YOR005C YPT53P36019 220 aa2.01□□□□□ -2.09
DNL4YOR005C GPI18P38211 433 aa2.01□□□□□ -2.09
DNL4YOR005C BDH1P39714 382 aa2.01□□□□□ -2.09
DNL4YOR005C RRT13P40042 185 aa2.01□□□□□ -2.09
DNL4YOR005C YER076CP40049 302 aa2.01□□□□□ -2.09
DNL4YOR005C MOB1P40484 314 aa2.01□□□□□ -2.09
DNL4YOR005C YGR050CP53231 118 aa2.01□□□□□ -2.09
DNL4YOR005C ABF2Q02486 183 aa2.01□□□□□ -2.09
DNL4YOR005C YMR007WQ03675 126 aa2.01□□□□□ -2.09
DNL4YOR005C TSA2Q04120 196 aa2.01□□□□□ -2.09
DNL4YOR005C GRH1Q04410 372 aaKnown RBP2.01□□□□□ -2.09
DNL4YOR005C YBL112CQ3E7Y4 105 aa2.01□□□□□ -2.09
DNL4YOR005C YHR214C-EQ8TGK0 99 aa2.01□□□□□ -2.09
DNL4YOR005C YOL085CQ99345 113 aa2.01□□□□□ -2.09
DNL4YOR005C IGO2Q9P305 131 aa2.01□□□□□ -2.09
DNL4YOR005C TIR1P10863 254 aa2□□□□□ -2.09
DNL4YOR005C FCY2P17064 533 aa2□□□□□ -2.09
DNL4YOR005C YHR138CP38841 114 aaPredicted RBP2□□□□□ -2.09
DNL4YOR005C ARP3P47117 449 aaKnown RBP2□□□□□ -2.09
DNL4YOR005C ATP19P81451 68 aa2□□□□□ -2.09
DNL4YOR005C YAL067W-AQ8TGK6 75 aa2□□□□□ -2.09
DNL4YOR005C FPR2P32472 135 aa2□□□□□ -2.09
DNL4YOR005C YBL081WP38180 368 aaKnown RBP2□□□□□ -2.09
DNL4YOR005C CUP9P41817 306 aa2□□□□□ -2.09
DNL4YOR005C YFR054CP43622 192 aa2□□□□□ -2.09
DNL4YOR005C YNL184CP53876 108 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms