RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C SFT1P43682 97 aa6.08□□□□□ -1.44
AFG2YLR397C CIS3P47001 227 aa6.08□□□□□ -1.44
AFG2YLR397C AIM11P87275 137 aa6.08□□□□□ -1.44
AFG2YLR397C YPR064WQ12492 139 aa6.08□□□□□ -1.44
AFG2YLR397C YHR140WP38842 239 aa6.08□□□□□ -1.44
AFG2YLR397C MET32Q12041 191 aa6.08□□□□□ -1.44
AFG2YLR397C YBR255C-AQ3E776 120 aa6.08□□□□□ -1.44
AFG2YLR397C PIS1P06197 220 aaKnown RBP6.07□□□□□ -1.44
AFG2YLR397C RXT3Q07458 294 aa6.07□□□□□ -1.44
AFG2YLR397C RPS21AP0C0V8 87 aaKnown RBP6.07□□□□□ -1.44
AFG2YLR397C RPP1P38786 293 aa6.07□□□□□ -1.44
AFG2YLR397C YEL067CP39978 195 aa6.07□□□□□ -1.44
AFG2YLR397C MST27P53176 234 aa6.07□□□□□ -1.44
AFG2YLR397C YKL023C-AQ2V2P3 75 aa6.06□□□□□ -1.44
AFG2YLR397C QRI5P32344 111 aa6.05□□□□□ -1.44
AFG2YLR397C PAD1P33751 242 aaKnown RBP RIP-Chip data6.05□□□□□ -1.44not detected
AFG2YLR397C PCL5P38794 229 aa6.05□□□□□ -1.44
AFG2YLR397C YAR029WP39549 74 aa6.05□□□□□ -1.44
AFG2YLR397C YER181CP40097 107 aa6.05□□□□□ -1.44
AFG2YLR397C RAF1Q06891 181 aa6.05□□□□□ -1.44
AFG2YLR397C YDL180WQ12301 547 aa6.05□□□□□ -1.44
AFG2YLR397C KSH1Q8TGJ3 72 aa6.05□□□□□ -1.44
AFG2YLR397C Q0182Q9ZZW1 134 aa6.05□□□□□ -1.44
AFG2YLR397C ECM15P35195 104 aa6.05□□□□□ -1.44
AFG2YLR397C YER079WP40052 210 aaKnown RBP6.05□□□□□ -1.44
AFG2YLR397C TDA7P53882 636 aaPredicted RBP6.05□□□□□ -1.44
AFG2YLR397C TIM18Q08749 192 aa6.05□□□□□ -1.44
AFG2YLR397C MPD1Q12404 318 aaKnown RBP6.05□□□□□ -1.44
AFG2YLR397C HUG1Q6Q5K6 68 aa6.05□□□□□ -1.44
AFG2YLR397C YHR139C-AO13536 103 aa6.04□□□□□ -1.44
AFG2YLR397C SNT309Q06091 175 aaPredicted RBP6.04□□□□□ -1.44
AFG2YLR397C YPL073CP40323 161 aa6.04□□□□□ -1.44
AFG2YLR397C UBC9P50623 157 aaPredicted RBP6.04□□□□□ -1.44
AFG2YLR397C YOR186WQ08560 144 aa6.04□□□□□ -1.44
AFG2YLR397C YOR097CQ12274 175 aaPredicted RBP6.04□□□□□ -1.44
AFG2YLR397C RRT15Q3E811 62 aa6.04□□□□□ -1.44
AFG2YLR397C QCR9P22289 66 aa6.03□□□□□ -1.44
AFG2YLR397C TIM12P32830 109 aa6.03□□□□□ -1.44
AFG2YLR397C TPC1P53257 314 aa6.03□□□□□ -1.44
AFG2YLR397C OGG1P53397 376 aaPredicted RBP6.03□□□□□ -1.44
AFG2YLR397C YLR281CQ05863 155 aa6.03□□□□□ -1.44
AFG2YLR397C TRP1P00912 224 aa6.03□□□□□ -1.44
AFG2YLR397C FIP1P45976 327 aa6.03□□□□□ -1.44
AFG2YLR397C PET191Q02772 108 aa6.03□□□□□ -1.44
AFG2YLR397C GAT3Q07928 141 aa6.03□□□□□ -1.44
AFG2YLR397C YPL264CQ08980 353 aa6.03□□□□□ -1.44
AFG2YLR397C YDL211CQ12121 372 aa6.03□□□□□ -1.44
AFG2YLR397C FZF1P32805 299 aa6.02□□□□□ -1.45
AFG2YLR397C SMP1P38128 452 aa6.02□□□□□ -1.45
AFG2YLR397C GPI18P38211 433 aa6.02□□□□□ -1.45
AFG2YLR397C GLE2P40066 365 aa6.02□□□□□ -1.45
AFG2YLR397C YCR006CP25350 157 aa6.02□□□□□ -1.45
AFG2YLR397C FMP46P36141 133 aaKnown RBP6.02□□□□□ -1.45
AFG2YLR397C YBL081WP38180 368 aaKnown RBP6.02□□□□□ -1.45
AFG2YLR397C IMP1P28627 190 aa6.01□□□□□ -1.45
AFG2YLR397C PET8P38921 284 aa6.01□□□□□ -1.45
AFG2YLR397C YDL022C-AP0C5L6 82 aa6□□□□□ -1.45
AFG2YLR397C VHS2P40463 436 aa6□□□□□ -1.45
AFG2YLR397C YPI1P43587 155 aa6□□□□□ -1.45
AFG2YLR397C MRX11Q03079 207 aa6□□□□□ -1.45
AFG2YLR397C IES6P32617 166 aa6□□□□□ -1.45
AFG2YLR397C SKI6P46948 246 aaPredicted RBP6□□□□□ -1.45
AFG2YLR397C YDR209CQ03480 137 aa6□□□□□ -1.45
AFG2YLR397C YMR321CQ04898 105 aa6□□□□□ -1.45
AFG2YLR397C YOL118CQ08259 102 aa6□□□□□ -1.45
AFG2YLR397C BLM10P43583 2143 aa6□□□□□ -1.45
AFG2YLR397C RPS14AP06367 137 aaKnown RBP5.99□□□□□ -1.45
AFG2YLR397C VMA3P25515 160 aa5.99□□□□□ -1.45
AFG2YLR397C RFA2P26754 273 aaKnown RBP5.99□□□□□ -1.45
AFG2YLR397C FPR2P32472 135 aa5.99□□□□□ -1.45
AFG2YLR397C ISF1P32488 338 aa5.99□□□□□ -1.45
AFG2YLR397C APS1P35181 156 aa5.99□□□□□ -1.45
AFG2YLR397C YHL042WP38729 150 aa5.99□□□□□ -1.45
AFG2YLR397C LYS1P38998 373 aaRIP-Chip data5.99□□□□□ -1.45not detected
AFG2YLR397C SRX1P36077 127 aa5.99□□□□□ -1.45
AFG2YLR397C SWS2P53937 143 aa5.99□□□□□ -1.45
AFG2YLR397C SDC1Q03323 175 aa5.99□□□□□ -1.45
AFG2YLR397C DAT1P13483 248 aaKnown RBP5.98□□□□□ -1.45
AFG2YLR397C ROX3P25046 220 aa5.98□□□□□ -1.45
AFG2YLR397C MBB1P39534 108 aa5.98□□□□□ -1.45
AFG2YLR397C JJJ3P47138 172 aa5.98□□□□□ -1.45
AFG2YLR397C YNR077CP53758 84 aa5.98□□□□□ -1.45
AFG2YLR397C KTI11Q3E840 82 aa5.98□□□□□ -1.45
AFG2YLR397C RPS16AP0CX51 143 aaKnown RBP5.98□□□□□ -1.45
AFG2YLR397C RPS16BP0CX52 143 aaKnown RBP5.98□□□□□ -1.45
AFG2YLR397C RPB8P20436 146 aa5.98□□□□□ -1.45
AFG2YLR397C YKL044WP36092 106 aa5.98□□□□□ -1.45
AFG2YLR397C YHL018WP38744 120 aaPredicted RBP5.98□□□□□ -1.45
AFG2YLR397C RRT13P40042 185 aa5.98□□□□□ -1.45
AFG2YLR397C VTC1P40046 129 aaRIP-Chip data5.98□□□□□ -1.45not detected
AFG2YLR397C YOR192C-CQ3E736 78 aa5.98□□□□□ -1.45
AFG2YLR397C EAF6P47128 113 aa5.97□□□□□ -1.45
AFG2YLR397C YPL261CQ08976 102 aa5.97□□□□□ -1.45
AFG2YLR397C YSR3P23501 404 aa5.97□□□□□ -1.45
AFG2YLR397C CSH1P38287 376 aa5.97□□□□□ -1.45
AFG2YLR397C TOM7P53507 60 aa5.97□□□□□ -1.45
AFG2YLR397C YPL038W-AQ3E7B4 63 aa5.97□□□□□ -1.45
AFG2YLR397C IGO2Q9P305 131 aa5.97□□□□□ -1.45
AFG2YLR397C MRPL31P14063 131 aaPredicted RBP5.96□□□□□ -1.46
AFG2YLR397C TOM6P33448 61 aa5.96□□□□□ -1.46
Retrieved 100 of 5,963 RNA–protein pairs in 79.1 ms