RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 CCNG2Q16589 344 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 PTGISQ16647 500 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 GLRA4Q5JXX5 417 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 WDTC1Q8N5D0 677 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 HMGXB4Q9UGU5 601 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 CEP83Q9Y592 693 aa15.94■□□□□ 0.14
TRIM3-215ENST00000639856 DCDC2CA8MYV0 355 aa15.93■□□□□ 0.14
TRIM3-215ENST00000639856 EBAG9O00559 213 aa15.93■□□□□ 0.14
TRIM3-215ENST00000639856 RIPK2O43353 540 aa15.93■□□□□ 0.14
TRIM3-215ENST00000639856 KPNA6O60684 536 aa15.93■□□□□ 0.14
TRIM3-215ENST00000639856 IVDP26440 423 aa15.93■□□□□ 0.14
TRIM3-215ENST00000639856 CRYBB1P53674 252 aaPredicted RBP15.93■□□□□ 0.14
TRIM3-215ENST00000639856 TAP1Q03518 808 aa15.93■□□□□ 0.14
TRIM3-215ENST00000639856 FAM47CQ5HY64 1035 aa15.93■□□□□ 0.14
TRIM3-215ENST00000639856 DNAJC24Q6P3W2 148 aa15.93■□□□□ 0.14
TRIM3-215ENST00000639856 CD99L2Q8TCZ2 262 aa15.93■□□□□ 0.14
TRIM3-215ENST00000639856 PGM2Q96G03 612 aa15.93■□□□□ 0.14
TRIM3-215ENST00000639856 SNF8Q96H20 258 aa15.93■□□□□ 0.14
TRIM3-215ENST00000639856 HPDLQ96IR7 371 aa15.93■□□□□ 0.14
TRIM3-215ENST00000639856 TRIM6Q9C030 488 aaPredicted RBP15.93■□□□□ 0.14
TRIM3-215ENST00000639856 SPC25Q9HBM1 224 aa15.93■□□□□ 0.14
TRIM3-215ENST00000639856 PDCD11Q14690 1871 aaKnown RBP15.92■□□□□ 0.14
TRIM3-215ENST00000639856 TULP2O00295 520 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 PPEF2O14830 753 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 RECQL4O94761 1208 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 GJC1P36383 396 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 CETN2P41208 172 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 ZNF252P-AS1Q0IIN9 211 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 BYSLQ13895 437 aaKnown RBP15.92■□□□□ 0.14
TRIM3-215ENST00000639856 PCBP1Q15365 356 aaKnown RBP eCLIP15.92■□□□□ 0.14
TRIM3-215ENST00000639856 UBXN11Q5T124 520 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 RHBDF2Q6PJF5 856 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 CROCCP2Q86T23 111 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 C18orf25Q96B23 403 aaPredicted RBP15.92■□□□□ 0.14
TRIM3-215ENST00000639856 FAXDC2Q96IV6 333 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 CCDC114Q96M63 670 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 MCEEQ96PE7 176 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 TWNKQ96RR1 684 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 RNF39Q9H2S5 420 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 TUBGCP4Q9UGJ1 667 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 ITGA11Q9UKX5 1188 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 THSD7BQ9C0I4 1608 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 ASGR1P07306 291 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 CTSHP09668 335 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 KCNA10Q16322 511 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 PPP1R15BQ5SWA1 713 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 LRRC38Q5VT99 294 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 TAF2Q6P1X5 1199 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 DCUN1D2Q6PH85 259 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 APBB1IPQ7Z5R6 666 aaPredicted RBP15.92■□□□□ 0.14
TRIM3-215ENST00000639856 ANKS1BQ7Z6G8 1248 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 ERICH1Q86X53 443 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 RCOR2Q8IZ40 523 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 NME8Q8N427 588 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 C3orf20Q8ND61 904 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 RBM41Q96IZ5 413 aaKnown RBP15.92■□□□□ 0.14
TRIM3-215ENST00000639856 TMEM109Q9BVC6 243 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 CREBZFQ9NS37 354 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 KLK14Q9P0G3 267 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 NEU2Q9Y3R4 380 aa15.92■□□□□ 0.14
TRIM3-215ENST00000639856 ATICP31939 592 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 CAV1Q03135 178 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 ADCY2Q08462 1091 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 NFX1Q12986 1120 aaKnown RBP15.91■□□□□ 0.14
TRIM3-215ENST00000639856 PIGHQ14442 188 aaPredicted RBP15.91■□□□□ 0.14
TRIM3-215ENST00000639856 UBAP2Q5T6F2 1119 aaKnown RBP15.91■□□□□ 0.14
TRIM3-215ENST00000639856 TRMT10CQ7L0Y3 403 aaKnown RBP15.91■□□□□ 0.14
TRIM3-215ENST00000639856 FAM228AQ86W67 206 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 CCDC25Q86WR0 208 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 TSPYL1Q9H0U9 437 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 VRTNQ9H8Y1 702 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 PLEKHA5Q9HAU0 1116 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 AAASQ9NRG9 546 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 CDY2AQ9Y6F7 541 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 MYO1CO00159 1063 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 TCF4P15884 667 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 AXLP30530 894 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 YARSP54577 528 aaKnown RBP15.91■□□□□ 0.14
TRIM3-215ENST00000639856 RAD23BP54727 409 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 NKX3-2P78367 333 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 MRPS6P82932 125 aaKnown RBP15.91■□□□□ 0.14
TRIM3-215ENST00000639856 RBP5P82980 135 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 OGDHQ02218 1023 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 ATP13A4Q4VNC1 1196 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 C6orf118Q5T5N4 469 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 ALKAL1Q6UXT8 129 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 NIPA2Q8N8Q9 360 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 ELOVL4Q9GZR5 314 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 LHX5Q9H2C1 402 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 SRRDQ9UH36 339 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 STRIP2Q9ULQ0 834 aa15.91■□□□□ 0.14
TRIM3-215ENST00000639856 TLDC2A0PJX2 215 aa15.9■□□□□ 0.14
TRIM3-215ENST00000639856 F8VP50 259 aa15.9■□□□□ 0.14
TRIM3-215ENST00000639856 MED7O43513 233 aa15.9■□□□□ 0.14
TRIM3-215ENST00000639856 PAEPP09466 180 aa15.9■□□□□ 0.14
TRIM3-215ENST00000639856 ATF2P15336 505 aa15.9■□□□□ 0.14
TRIM3-215ENST00000639856 CD19P15391 556 aa15.9■□□□□ 0.14
TRIM3-215ENST00000639856 SEC24CP53992 1094 aa15.9■□□□□ 0.14
TRIM3-215ENST00000639856 TRIP13Q15645 432 aaPredicted RBP15.9■□□□□ 0.14
TRIM3-215ENST00000639856 ZBTB6Q15916 424 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms