RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 CCND2P30279 289 aa8.4□□□□□ -1.06
PSEN1-215ENST00000556011 GRIA4P48058 902 aa8.4□□□□□ -1.06
PSEN1-215ENST00000556011 NUMA1Q14980 2115 aa8.4□□□□□ -1.06
PSEN1-215ENST00000556011 TCTN3Q6NUS6 607 aa8.4□□□□□ -1.06
PSEN1-215ENST00000556011 PARS2Q7L3T8 475 aaKnown RBP8.4□□□□□ -1.06
PSEN1-215ENST00000556011 ZFAND4Q86XD8 727 aa8.4□□□□□ -1.06
PSEN1-215ENST00000556011 CPA6Q8N4T0 437 aa8.4□□□□□ -1.06
PSEN1-215ENST00000556011 UBR7Q8N806 425 aa8.4□□□□□ -1.06
PSEN1-215ENST00000556011 HASPINQ8TF76 798 aa8.4□□□□□ -1.06
PSEN1-215ENST00000556011 TSR2Q969E8 191 aaKnown RBP8.4□□□□□ -1.06
PSEN1-215ENST00000556011 PGBD4Q96DM1 585 aa8.4□□□□□ -1.06
PSEN1-215ENST00000556011 CATSPER2Q96P56 530 aa8.4□□□□□ -1.06
PSEN1-215ENST00000556011 ELF4Q99607 663 aaPredicted RBP8.4□□□□□ -1.06
PSEN1-215ENST00000556011 CYP4F11Q9HBI6 524 aa8.4□□□□□ -1.06
PSEN1-215ENST00000556011 TM9SF3Q9HD45 589 aa8.4□□□□□ -1.06
PSEN1-215ENST00000556011 GJB4Q9NTQ9 266 aa8.4□□□□□ -1.06
PSEN1-215ENST00000556011 CACNG4Q9UBN1 327 aa8.4□□□□□ -1.06
PSEN1-215ENST00000556011 SCN8AQ9UQD0 1980 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 MYH6P13533 1939 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 SF3B1O75533 1304 aaKnown RBP eCLIP8.39□□□□□ -1.078e-7■■■■■ 100.3
PSEN1-215ENST00000556011 M0R2C6 588 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 PHACTR2O75167 634 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 PRDM1O75626 825 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 RTN3O95197 1032 aaPredicted RBP8.39□□□□□ -1.07
PSEN1-215ENST00000556011 VSIG8P0DPA2 414 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 BNIP3Q12983 259 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 USP4Q13107 963 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 CEBPEQ15744 281 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 KRTAP24-1Q3LI83 254 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 GNPTABQ3T906 1256 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 NADK2Q4G0N4 442 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 HSF5Q4G112 596 aaPredicted RBP8.39□□□□□ -1.07
PSEN1-215ENST00000556011 CEP135Q66GS9 1140 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 PODNL1Q6PEZ8 512 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 CHTF18Q8WVB6 975 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 APOBEC4Q8WW27 367 aaKnown RBP8.39□□□□□ -1.07
PSEN1-215ENST00000556011 SNX19Q92543 992 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 TNPO1Q92973 898 aaKnown RBP8.39□□□□□ -1.07
PSEN1-215ENST00000556011 LRRC3Q9BY71 257 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 ABCG4Q9H172 646 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 ANTXR1Q9H6X2 564 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 MIOSQ9NXC5 875 aa8.39□□□□□ -1.07
PSEN1-215ENST00000556011 WSB2Q9NYS7 404 aaPredicted RBP8.39□□□□□ -1.07
PSEN1-215ENST00000556011 A0A1B0GVM2 712 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 ANKUB1A6NFN9 424 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 FAM171A2A8MVW0 826 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 TRAK2O60296 914 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 LZTS3O60299 673 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-215ENST00000556011 PDGFAP04085 211 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 OPRD1P41143 372 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 TNFSF9P41273 254 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 DAB2P98082 770 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 RAD51AP2Q09MP3 1159 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 MESP2Q0VG99 397 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 TWF1Q12792 350 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 ZNF630Q2M218 657 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-215ENST00000556011 ZNF517Q6ZMY9 492 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-215ENST00000556011 MCF2L2Q86YR7 1114 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 RIN3Q8TB24 985 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 C19orf60Q96EN9 201 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 RANBP9Q96S59 729 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 MAF1Q9H063 256 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 USP44Q9H0E7 712 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 COPRSQ9NQ92 184 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 CCL26Q9Y258 94 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 PCDHB2Q9Y5E7 798 aa8.38□□□□□ -1.07
PSEN1-215ENST00000556011 SIGLEC6O43699 453 aa8.37□□□□□ -1.07
PSEN1-215ENST00000556011 KRT86O43790 486 aa8.37□□□□□ -1.07
PSEN1-215ENST00000556011 REC8O95072 547 aa8.37□□□□□ -1.07
PSEN1-215ENST00000556011 DARSP14868 501 aaKnown RBP8.37□□□□□ -1.07
PSEN1-215ENST00000556011 KIR2DL1P43626 348 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-215ENST00000556011 RPL10AP62906 217 aaKnown RBP8.37□□□□□ -1.07
PSEN1-215ENST00000556011 MRPS9P82933 396 aaKnown RBP8.37□□□□□ -1.07
PSEN1-215ENST00000556011 SEPT6Q14141 434 aa8.37□□□□□ -1.07
PSEN1-215ENST00000556011 SFMBT2Q5VUG0 894 aa8.37□□□□□ -1.07
PSEN1-215ENST00000556011 STOX1Q6ZVD7 989 aa8.37□□□□□ -1.07
PSEN1-215ENST00000556011 CCDC13Q8IYE1 715 aa8.37□□□□□ -1.07
PSEN1-215ENST00000556011 TCEAL8Q8IYN2 117 aa8.37□□□□□ -1.07
PSEN1-215ENST00000556011 ZNF444Q8N0Y2 327 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-215ENST00000556011 METTL13Q8N6R0 699 aa8.37□□□□□ -1.07
PSEN1-215ENST00000556011 JPH3Q8WXH2 748 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-215ENST00000556011 RTEL1Q9NZ71 1219 aa8.37□□□□□ -1.07
PSEN1-215ENST00000556011 CROTQ9UKG9 612 aa8.37□□□□□ -1.07
PSEN1-215ENST00000556011 PCDHB11Q9Y5F2 797 aa8.37□□□□□ -1.07
PSEN1-215ENST00000556011 TDRD6O60522 2096 aaKnown RBP8.37□□□□□ -1.07
PSEN1-215ENST00000556011 A0A1W2PQF6 199 aa8.36□□□□□ -1.07
PSEN1-215ENST00000556011 FIBPO43427 364 aa8.36□□□□□ -1.07
PSEN1-215ENST00000556011 PPP6R2O75170 966 aa8.36□□□□□ -1.07
PSEN1-215ENST00000556011 CRLF1O75462 422 aa8.36□□□□□ -1.07
PSEN1-215ENST00000556011 LPOP22079 712 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-215ENST00000556011 EPHA8P29322 1005 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-215ENST00000556011 WASP42768 502 aa8.36□□□□□ -1.07
PSEN1-215ENST00000556011 RAB27AP51159 221 aa8.36□□□□□ -1.07
PSEN1-215ENST00000556011 SCNN1GP51170 649 aa8.36□□□□□ -1.07
PSEN1-215ENST00000556011 FUT2Q10981 343 aa8.36□□□□□ -1.07
PSEN1-215ENST00000556011 DHX8Q14562 1220 aaKnown RBP8.36□□□□□ -1.07
PSEN1-215ENST00000556011 PDGFRLQ15198 375 aa8.36□□□□□ -1.07
PSEN1-215ENST00000556011 CCDC158Q5M9N0 1113 aa8.36□□□□□ -1.07
PSEN1-215ENST00000556011 ADAT2Q7Z6V5 191 aaKnown RBP8.36□□□□□ -1.07
PSEN1-215ENST00000556011 WFDC11Q8NEX6 87 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms