RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 USP20Q9Y2K6 914 aa5.9□□□□□ -1.46
HOXB3-213ENST00000552000 MSRB2Q9Y3D2 182 aa5.9□□□□□ -1.46
HOXB3-213ENST00000552000 NEUROG3Q9Y4Z2 214 aa5.9□□□□□ -1.46
HOXB3-213ENST00000552000 CEP192Q8TEP8 1941 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 CREBBPQ92793 2442 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 COL12A1Q99715 3063 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 A0A087WWV3 80 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 SPAARA0A1B0GVQ0 90 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 PATE3B3GLJ2 98 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 H7C4K7 107 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 CDX4O14627 284 aaPredicted RBP5.89□□□□□ -1.47
HOXB3-213ENST00000552000 KHNYNO15037 678 aaKnown RBP5.89□□□□□ -1.47
HOXB3-213ENST00000552000 MARCH6O60337 910 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 USO1O60763 962 aaKnown RBP5.89□□□□□ -1.47
HOXB3-213ENST00000552000 CPA1P15085 419 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 GBP1P32455 592 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 PCBP4P57723 403 aaKnown RBP5.89□□□□□ -1.47
HOXB3-213ENST00000552000 SOX4Q06945 474 aaPredicted RBP5.89□□□□□ -1.47
HOXB3-213ENST00000552000 TLR1Q15399 786 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 NTRK3Q16288 839 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 UPP1Q16831 310 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 ITPRIPL2Q3MIP1 535 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 ADCK5Q3MIX3 580 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 CTXN3Q4LDR2 81 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 ARHGAP29Q52LW3 1261 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 EEF1DP3Q658K8 133 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 TPGS2Q68CL5 300 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 FSTL4Q6MZW2 842 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 MAEAQ7L5Y9 396 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 HAUS6Q7Z4H7 955 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 LEMD2Q8NC56 503 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 C1orf216Q8TAB5 229 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 BRF1Q92994 677 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 PRIMPOLQ96LW4 560 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 FAM20AQ96MK3 541 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 PPP1R10Q96QC0 940 aaKnown RBP5.89□□□□□ -1.47
HOXB3-213ENST00000552000 RNF26Q9BY78 433 aaPredicted RBP5.89□□□□□ -1.47
HOXB3-213ENST00000552000 NFKBIZQ9BYH8 718 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 GPR88Q9GZN0 384 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 NCOA5Q9HCD5 579 aaKnown RBP5.89□□□□□ -1.47
HOXB3-213ENST00000552000 KCNMB3Q9NPA1 279 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 GPRC5CQ9NQ84 441 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 SH3GLB2Q9NR46 395 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 AFF4Q9UHB7 1163 aaKnown RBP5.89□□□□□ -1.47
HOXB3-213ENST00000552000 PCDHA4Q9UN74 947 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 INVSQ9Y283 1065 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 YIPF1Q9Y548 306 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 HRH3Q9Y5N1 445 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 ANK1P16157 1881 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 ATMQ13315 3056 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 TEX15Q9BXT5 2789 aa5.89□□□□□ -1.47
HOXB3-213ENST00000552000 FLNCQ14315 2725 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 PTPRBP23467 1997 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 EIF4E1BA6NMX2 242 aaKnown RBP5.88□□□□□ -1.47
HOXB3-213ENST00000552000 M0R2N6 131 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 PODXLO00592 558 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 SYN3O14994 580 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 ATG13O75143 517 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 PRAMEF12O95522 483 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 EGFP01133 1207 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 EDN1P05305 212 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 MAPTP10636 758 aaKnown RBP5.88□□□□□ -1.47
HOXB3-213ENST00000552000 CPB1P15086 417 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 IFNAR1P17181 557 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 CCT2P78371 535 aaKnown RBP5.88□□□□□ -1.47
HOXB3-213ENST00000552000 IRX4P78413 519 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 SIM1P81133 766 aaPredicted RBP5.88□□□□□ -1.47
HOXB3-213ENST00000552000 GRSF1Q12849 480 aaKnown RBP eCLIP5.88□□□□□ -1.47
HOXB3-213ENST00000552000 NR1H3Q13133 447 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 PRPF4BQ13523 1007 aaKnown RBP5.88□□□□□ -1.47
HOXB3-213ENST00000552000 MRPL58Q14197 206 aaKnown RBP5.88□□□□□ -1.47
HOXB3-213ENST00000552000 FAM187BQ17R55 369 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 COL28A1Q2UY09 1125 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 TMEM196Q5HYL7 178 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 GPR158Q5T848 1215 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 ZNF468Q5VIY5 522 aaPredicted RBP5.88□□□□□ -1.47
HOXB3-213ENST00000552000 PPP4R3AQ6IN85 833 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 ZNF280DQ6N043 979 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 Q6ZUG5 572 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 PROSER1Q86XN7 944 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 TMC8Q8IU68 726 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 ZBTB8OSQ8IWT0 167 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 BLIDQ8IZY5 108 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 CHCHD4Q8N4Q1 142 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 CAMKK1Q8N5S9 505 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 HAS1Q92839 578 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 UROC1Q96N76 676 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 BBC3Q96PG8 261 aaPredicted RBP5.88□□□□□ -1.47
HOXB3-213ENST00000552000 EIF2AK1Q9BQI3 630 aaKnown RBP5.88□□□□□ -1.47
HOXB3-213ENST00000552000 ADPGKQ9BRR6 497 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 MKNK1Q9BUB5 465 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 LRRC3Q9BY71 257 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 FZD8Q9H461 694 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 SLC32A1Q9H598 525 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 DNAAF2Q9NVR5 837 aaKnown RBP5.88□□□□□ -1.47
HOXB3-213ENST00000552000 KLF15Q9UIH9 416 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 NUB1Q9Y5A7 615 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 MYO9AB2RTY4 2548 aa5.88□□□□□ -1.47
HOXB3-213ENST00000552000 TEP1Q99973 2627 aaKnown RBP5.88□□□□□ -1.47
HOXB3-213ENST00000552000 SCN1AP35498 2009 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms