RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 FUCA2Q9BTY2 467 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 TRIM62Q9BVG3 475 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 GON7Q9BXV9 100 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 GCOM2Q9BZD3 368 aaPredicted RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 TTYH3Q9C0H2 523 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 NDST4Q9H3R1 872 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 TFB2MQ9H5Q4 396 aaKnown RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 TMEM206Q9H813 350 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 SYTL2Q9HCH5 934 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 ALG13Q9NP73 1137 aaKnown RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 TBC1D23Q9NUY8 699 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 POLR3BQ9NW08 1133 aaPredicted RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 FANCLQ9NW38 375 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 FAM8A1Q9UBU6 413 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 PCDHA12Q9UN75 941 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 DTNAQ9Y4J8 743 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 PARP3Q9Y6F1 533 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 GRIN2DO15399 1336 aa5.38□□□□□ -1.55
UBE4A-203ENST00000545354 SOS2Q07890 1332 aaPredicted RBP5.38□□□□□ -1.55
UBE4A-203ENST00000545354 FANCAO15360 1455 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 PREX1Q8TCU6 1659 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 E2F8A0AVK6 867 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 FAM172BPA6NC97 362 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 ARGFXA6NJG6 315 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 H0Y858 1186 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 AP3D1O14617 1153 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 CAPN9O14815 690 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 HSF2BPO75031 334 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 SOCS5O75159 536 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 SERPINI2O75830 405 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 GNA14O95837 355 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 SYF2O95926 243 aaKnown RBP5.37□□□□□ -1.55
UBE4A-203ENST00000545354 SSBP05455 408 aaKnown RBP eCLIP5.37□□□□□ -1.55
UBE4A-203ENST00000545354 ASNSP08243 561 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 NFICP08651 508 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 HMOX1P09601 288 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 HSMCR30P0CW71 290 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 ITGB6P18564 788 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 XPAP23025 273 aaPredicted RBP5.37□□□□□ -1.55
UBE4A-203ENST00000545354 STAT1P42224 750 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 ME1P48163 572 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 NEK3P51956 506 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 ARFIP2P53365 341 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 P2RX3P56373 397 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 STX1BP61266 288 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 NKX3-2P78367 333 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 CENPCQ03188 943 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 CALCOCO2Q13137 446 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 SMAD4Q13485 552 aaKnown RBP5.37□□□□□ -1.55
UBE4A-203ENST00000545354 PTGISQ16647 500 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 PHKG1Q16816 387 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 GLE1Q53GS7 698 aaKnown RBP5.37□□□□□ -1.55
UBE4A-203ENST00000545354 TCHHL1Q5QJ38 904 aaPredicted RBP5.37□□□□□ -1.55
UBE4A-203ENST00000545354 GPR139Q6DWJ6 353 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 ELMSAN1Q6PJG2 1045 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 TRIM67Q6ZTA4 783 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 TSPYL5Q86VY4 417 aaPredicted RBP5.37□□□□□ -1.55
UBE4A-203ENST00000545354 NME9Q86XW9 330 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 TREML1Q86YW5 311 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 DENND6AQ8IWF6 608 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 TBC1D19Q8N5T2 526 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 NOA1Q8NC60 698 aaKnown RBP5.37□□□□□ -1.55
UBE4A-203ENST00000545354 TRPV1Q8NER1 839 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 GRPEL2Q8TAA5 225 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 LHFPL5Q8TAF8 219 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 METTL6Q8TCB7 284 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 PXYLP1Q8TE99 480 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 COG1Q8WTW3 980 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 RNF139Q8WU17 664 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 SCFD1Q8WVM8 642 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 DNAJC9Q8WXX5 260 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 CCT6BQ92526 530 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 HDAC2Q92769 488 aaKnown RBP5.37□□□□□ -1.55
UBE4A-203ENST00000545354 PHACTR3Q96KR7 559 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 TESK2Q96S53 571 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 RANBP9Q96S59 729 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 MMS19Q96T76 1030 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 ACAT2Q9BWD1 397 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 DPEP3Q9H4B8 488 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 PLEKHA4Q9H4M7 779 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 TMEM134Q9H6X4 195 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 DDX4Q9NQI0 724 aaKnown RBP5.37□□□□□ -1.55
UBE4A-203ENST00000545354 C20orf96Q9NUD7 363 aaPredicted RBP5.37□□□□□ -1.55
UBE4A-203ENST00000545354 HSFX1Q9UBD0 423 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 CYTH4Q9UIA0 394 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 PCDHGA11Q9Y5H2 935 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 NCOA1Q15788 1441 aa5.37□□□□□ -1.55
UBE4A-203ENST00000545354 SOBPA7XYQ1 873 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 PSMD11O00231 422 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 FANCGO15287 622 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 FOXP2O15409 715 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 BUB1O43683 1085 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 GREM1O60565 184 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 OPN1LWP04000 364 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 TRIM27P14373 513 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 VAV1P15498 845 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 ALOX12P18054 663 aa5.36□□□□□ -1.55
UBE4A-203ENST00000545354 RAB4AP20338 218 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms